Liolophura japonica (common chiton): 135466481
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Entry
135466481 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp04140
Autophagy - animal
ljp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135466481
04148 Efferocytosis
135466481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ljp04131
]
135466481
Membrane trafficking [BR:
ljp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135466481
Hops complex
135466481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
PspA_IM30
ACBP4_C
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8_fungal
Occludin_ELL
zf-RING_11
zf-rbx1
DUF1664
zf-C3HC4
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
135466481
NCBI-ProteinID:
XP_064600048
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All DBs
Position
6:80216849..80266475
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AA seq
976 aa
AA seq
DB search
MASILDQYEQESARAASSLTSPQSVTEPIGGAGIIDARLRETEQPIFSKKKVNFKPPDPI
VHLTVCNNYLVMAMSSNILLRLDLERPDQPDEVEVTKAVEDRVHKIFLDPTGRHLIISME
STENYYLSRNSKKPKNIGKLKGHHIDSVGWNWQNANDNTTGAILLGTSKGLIFETELTAN
EETKFFQGSLDQYLKQLFNLGKEKAVPVTGLEFDRMPVNTMTEYKYYILATTPGRLYQFI
GNISASAEPPMFLHIFQQYEQMTEQFLELPGNFGYSELRLYQPKFREPARSFAWMTGPGV
YYGTIDVTGGAGQHSVTTNTKLIAYPREENERSSPPIAIVTTEFHILILFQERLKAICSL
NDQLIYDDLYADRFGRLLGLCKDPLRGTIWAYTPQCVFKYKVVREARDVWQMYLDKEEFE
LAKEYCKDNPVYMDKVLTRQAEYFFNHSEYEKSAXDVCHAQNSFEEITLKFIKLEQKEAL
KSFLQRKMGSLKAQDKTQVTMLVIWLIEIYLNNMVSXGAREDMSQKYDAVQEEFQRFLFH
PKIKECVSNNRSTVYDLIASHGDIEDMIYFAVLMQDFERVISHHLQHDNYTGALDVLRKQ
SDVELFYKFSPLLMQYVPKETVNAWIEQDTKLDPKKLIPALVQYDHEKYREQGNEAIRYL
EFCIQKLNNKDQAIHNYMLSLYAKLQPKHLMKYLLSQGQDADSICYDLKYGLRLCAEHSH
KEACVHIYSVMGLYEEAVDLALQVDVELAKDQADKPDEDDEELRKKLWLRIARHVVEEEK
DVKRAMAFLHECELLKIEDILPFFPDFVTIDHFKDAIIQSLQEYNQHIDTLKEEMEEATQ
SAEEIRKEIQSFRNKYAFVRTQDKCSACNFPLLTRTFYLFPCQHKFHNDCLIGEVLPNLT
LSIRARVEDLQRQLQEKDDPRYASRLAATPASMHSSKEQNIKAELDDIIASECVYCGDFM
IRNVDKEFVEGDEFEM
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatcttggatcagtatgagcaggaatctgcacgagcagcatctagtctgaca
tctcctcagagcgtaacagagcccattggaggtgcagggataattgatgctcgtctaagg
gaaacagaacaacctatcttcagcaagaaaaaagttaacttcaaacctccagacccaatt
gttcacttgacggtgtgtaacaactacttggtgatggccatgagtagtaatatcctactg
agactggatcttgaacgccctgaccagccagacgaggtggaagtaacaaaggcagtagag
gacagagtacataagatattcctggatcctacaggacgtcatctcataatcagcatggag
tccacagagaattattatctctccagaaactccaagaaacccaaaaatattggaaaatta
aaaggtcatcatattgactccgtgggctggaattggcagaatgccaacgacaatacaaca
ggggccatactgctggggaccagtaaagggttgatatttgagacagagctgacagcaaat
gaggagacaaagttcttccagggaagtttagaccagtatttaaaacagttgttcaacctg
gggaaggagaaggcagtacctgtgacaggtctggagtttgacaggatgccagtcaataca
atgacagagtacaagtactacatactggccaccacaccaggccgcctgtaccaatttatt
gggaacatctccgcatctgctgaacctcccatgtttctgcacatattccagcaatatgaa
cagatgacagaacagttcctggagctgccaggtaacttcggctacagtgagttacgtctg
taccagcccaaattccgtgaaccagctcgcagctttgcctggatgactggcccgggagtg
tactatggtaccattgatgtcacaggaggggcaggacagcactctgtcactaccaacacc
aagctgattgcctacccacgagaggagaatgagcgatccagcccccctatagcaatagtc
accacagaattccatatcttaattctgtttcaagaaagactgaaggccatctgttcgctg
aatgaccagctgatttatgatgacctgtatgctgatagatttggcaggctgttaggtctg
tgtaaggaccctctccggggcaccatctgggcgtacacccctcagtgtgtgttcaagtat
aaggtagtcagagaggccagggatgtatggcagatgtacctggacaaagaggagtttgag
ctggccaaggagtactgtaaggacaaccctgtatacatggataaggttctgaccaggcag
gcagagtatttcttcaaccattctgagtatgaaaagagtgccnntgacgtttgccatgct
cagaactcttttgaggagatcaccctcaagtttatcaaactggaacagaaagaggccttg
aaatcattcctgcagaggaagatgggttcactgaaagctcaggacaaaactcaggtgacg
atgctggtaatttggctgatagaaatttacctgaacaacatggtgagctgaggagcaagg
gaagatatgagtcagaagtatgacgctgtacaggaggagttccagcggttcctcttccac
cctaagatcaaggaatgtgtgagtaacaacaggagcacggtgtatgatctgatagccagc
catggggatattgaggacatgatctactttgctgtcctcatgcaagattttgagcgtgta
atcagccaccatctccaacatgacaactacacaggggctttggatgtgctcaggaagcag
agtgatgtggagctgttttacaagttctctcctctgctgatgcagtacgtgcccaaggaa
actgtgaatgcctggatagagcaagacactaaactggaccccaagaagttgatacccgcc
ctagttcagtatgaccatgagaaatacagggaacagggcaacgaggctatccggtattta
gagttctgtatccagaagctgaacaacaaagatcaggctattcacaactacatgttgtca
ctttatgccaagctgcagcccaaacacctgatgaagtacttgttgtcccaggggcaggat
gctgacagtatttgctatgacctgaagtatggcctgaggctgtgtgcagaacacagtcat
aaagaggcttgtgttcacatctactctgtcatggggctatacgaggaggctgtcgacttg
gctttacaggtggacgtggaattggccaaggaccaggcagacaaacctgatgaagatgat
gaggagttgaggaagaaactctggttacggatagcccgccatgttgtggaagaagaaaag
gatgttaaaagagccatggcattcctgcatgagtgtgagctcctcaagattgaggacatt
cttccattcttcccagactttgtcaccattgaccatttcaaggacgccatcatccagtcc
ctacaggagtacaaccagcacatagacaccctgaaggaggagatggaggaagcgacgcag
agcgctgaagagattcgcaaggagatccagagcttcagaaacaagtatgcgtttgtgagg
actcaggacaaatgttcagcctgtaacttccctttactgaccaggacattttacctgttc
ccatgccaacacaagttccataatgactgtcttataggagaggtgttgcctaacctgaca
ttgtctatccgggctcgtgttgaggacttacagagacagcttcaggagaaggatgatcca
cgctacgcttcacgtcttgccgccacacctgcctccatgcacagctccaaggagcagaac
atcaaggctgagctggatgacatcattgcctcagagtgtgtgtactgtggagatttcatg
atcaggaatgtggacaaggagtttgtggaaggagatgaatttgaaatgtga
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