Liolophura japonica (common chiton): 135466518
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Entry
135466518 CDS
T09976
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljp03021
]
135466518
Transcription machinery [BR:
ljp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
135466518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_12
TPR_11
TPR_6
TPR_7
TPR_10
ARM_TT21_5th
ANAPC3
TPR_9
TPR_Slam
ARM_TT21_4th
SNAP
DUF7017
RNA_pol_Rpb6
TPPII_C
DUF6584
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
135466518
NCBI-ProteinID:
XP_064600111
LinkDB
All DBs
Position
6:complement(45215583..45233355)
Genome browser
AA seq
1226 aa
AA seq
DB search
MSAGSIEIPLRDTDEVIELDLDQLPDGEEVLSILRQEQAQLHIWVSLALEYYKQGYVSDF
VKLLEASRADASLDYTNFERDQMRALDTLAAYYVMQAHKEKNKDKKRELFTQATLLYTTA
DRIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYR
GALAFYKKALRTNPNCPASVRLGMGHCFVKLNKFEKARLAFERALQLDPQCVGALVGLAI
LELNEKTQDSIKNGVQLLSKAYTIDPSNPMVLNHLANHFFYKKDYQKVQHLALHSFHNTE
NEAMRAESCYQLARAFHVQNDYDQAFQYYYQSTQFASANFVLPHFGLGQMYIYRGDTENA
AQCFEKVLKSQPGNYETMKILGSLYANSDETEKKDTAKQHLKKVTEQFPDDVEAWIELAQ
ILEQTDVQGALSAYGKATRILEDKVQADVPPEILNNVAALHFRLGNYQEAKKYYEASLDR
SRNEAQHDEPYYSAISVTITYNLARLLEASFEYDKAERLYKSILREHPNYVDCYLRLGCM
CRDRGQIYEASDWFKEALQINQDHPDAWSLIGNLHIGKQEWGPGQKKFERILQRPNTKDD
AYSLIALGNVWLQTLHQPMRDKEKEKRHQDRALAMYKQVLRNDGRNIWAANGIGCVLAHK
GCINEGRDIFAQVREATADFCDVWLNIAHIYVEQKQYVAAVQMYENCLKKFFKYNNTDVM
MYLARAYYRAGKLKECKQTLLKARHVSPSDTVVLYNIALVQQKLATSILSDEKSNLKAVL
GAVRDLELAHRYFYYLSQHGDRMKFDLAQAAAEAKQCTDLLSQAQYHLSRARRIDEQERE
VRRRQEEEREAIKQKQMEIQMEKQRQKEEQVRRVMEQRQVYVEKARKIVLEPEPEERSRK
SGKKKKMDEDDFVSDGSGDELPRKKKKRRGGSGSEGEGDDDGGRRKGKRRRDRESSRRER
KGRNPRKQKESKKKKKDEGDDGLTAKQRRKVVSKAIISSSEGSDSEGEEKLKIAGSGSES
DGGSGNEAVGKRRRIVSSGSESDEGKRSGSEGRRKRSRSGSRSGSGSRSRSGSGSRSRSR
SKSGSRSRSRSKSGSRSRSRSKSGSRSPSGSRSRSRSKSGSRSKSGSRSRSRSKSGSRSR
SRSKSGSRSRSRSKSGSRSRSRSKSGSRSRSRSKSGSRSRSRSKSRSKSRSRSRSGSRSG
SGNEGQGSDRGKSGDEGGKSGAEDSD
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaggatcgattgagatccccttgcgggataccgatgaggtgatagaacttgac
ttggatcagctcccggatggagaagaggttcttagtatcctgcgccaggagcaggctcag
ctccacatctgggtcagcctggcgctggaatattacaagcagggctatgtctctgacttt
gtcaaactcctggaggcctcccgggctgatgccagcctggactacacaaactttgagcga
gatcagatgcgagccctggacacgttggctgcatactacgtcatgcaggcccacaaggag
aagaataaagacaagaagagagagttgttcactcaggccacgctgctctacaccactgct
gaccgcatcatcatgtatgaccagaaccatcttcttggccgtgcgtacttctgtctcctc
gagggagacaagatggaccaagccgacgcacagttcaacttcgtccttaaccagtccccc
aacaacatcccctccttgctgggtaaagcatgtattgccttcaacaagaaggactacaga
ggcgctctggctttctataagaaagctttgagaaccaacccaaactgtccagcttctgtg
cgacttgggatgggtcactgcttcgtcaaactcaacaaatttgagaaagccaggttggca
tttgagcgcgcgctccagctggatccgcagtgtgtcggcgctctggttggattagccata
ctggagctgaatgagaagacccaggactcgatcaagaatggggtccagttactctccaag
gcgtacaccattgacccttccaatcccatggttctaaaccacctggccaaccatttcttc
tataagaaggactaccagaaggttcaacaccttgcactccattctttccataacactgag
aatgaggcaatgagagcagagagttgctaccaactagccagagcttttcatgtacagaat
gactacgatcaggcgtttcagtactactaccagtctacccagtttgcttcggctaacttt
gtactgccacactttggcctgggacagatgtacatctaccgtggagacacagaaaacgct
gcacagtgttttgagaaggtgctgaagtctcaacctggtaactatgagactatgaaaatt
ttgggctccctgtacgctaactctgatgaaacagagaagaaagacacagctaagcaacac
ctgaagaaggtgactgagcagtttcctgatgatgtggaggcctggatagaactggctcag
atcctggagcagactgatgtacagggtgccttgtctgcatatggcaaggccacaaggatc
ctggaggacaaggtccaagctgatgtacccccagagatactcaataatgtggcagctttg
cactttaggcttggcaattaccaggaagcaaagaagtactacgaggcttctctagatcgc
tcccgtaacgaggcccagcatgatgagccgtactacagcgccatctcggtcaccatcacc
tacaacctcgccaggctcctggaggcatcctttgagtatgacaaggctgagagactctac
aagagcattctcagagagcatcccaactatgtggactgttacctgcgactgggctgtatg
tgcagagataggggacagatctacgaggcttctgattggttcaaggaggctctgcagatc
aaccaggatcaccctgatgcctggtccctcatcggtaacctacatatcggcaagcaggag
tggggacctggacagaagaagtttgaacgtatccttcagagacccaatacaaaagatgat
gcctactcgctgattgctctggggaatgtttggcttcaaacactgcaccagcccatgaga
gacaaggaaaaggagaagcgtcaccaggatcgagctttggccatgtacaaacaggtgctg
aggaatgatggcagaaacatctgggcagccaatggcataggatgtgttcttgcccacaag
ggctgtattaacgagggtagagacatctttgcccaggtgcgtgaggcgacagctgacttc
tgtgatgtctggttgaacatcgcccacatctatgtggaacagaaacagtatgttgctgct
gtacaaatgtacgagaactgtttaaagaagtttttcaaatacaacaacacagatgttatg
atgtatttagccagggcatattatcgggcaggaaaactaaaggagtgtaagcaaacactt
ctgaaggcacgtcatgtttcccccagtgacacagtggtgctatataacattgccttagtc
cagcagaagcttgccacatccatcctcagtgatgagaagagtaacctgaaggcagtgtta
ggagctgtcagagacctggagttggcacacaggtatttctactaccttagccagcatggg
gacagaatgaagtttgatttggcacaggcagcagcagaggccaagcagtgtactgacctg
ctgagtcaggcacagtaccacttgtcgcgggcgcgtaggattgatgagcaggagcgtgag
gtgaggcgcagacaggaggaggagagagaggccatcaaacagaaacagatggagatccag
atggagaagcagagacagaaggaagaacaggtgcgacgtgtcatggagcaacgccaggtg
tatgtggagaaggcacgtaagatcgtcctggaaccagagcccgaggagagatcccgaaag
tctggaaagaagaagaagatggatgaggatgactttgtgtctgatggaagtggagacgag
ttaccgcgcaagaaaaagaagcggcgaggtgggagcgggtcggagggtgaaggagatgac
gatggtgggagacggaaaggcaagcgtcgaagggatagggaaagctccagaagggaacgc
aaggggaggaacccccggaaacagaaggagagcaagaagaagaagaaggacgagggtgat
gatgggctgacggccaagcagagacgtaaggtcgtgtctaaggctatcatctcctccagt
gagggctcagactcggagggagaggagaaactgaagattgctgggagtggcagtgaaagt
gatggtggcagtggaaatgaagcagtcggaaaacgacgcagaattgtgtcttctgggagc
gagagtgatgaagggaagaggagtgggagtgaaggtcgtaggaagcggtcgaggtcaggg
tcacgttctggatctggatcaaggtcaagatctggttccggatctcgttcccgctcaaga
tccaaatctggatcgcggtcacggtctagatccaaatctggatcgcgatcacggtctaga
tccaaatctggatcccgctcgccatcaggatcaagatcacgatcaagatccaagtcagga
tcccgctccaagtcaggatcaaggtcaagatcccgctccaaatctggatcaaggtcaaga
tcccgctccaaatctggatcaaggtcaagatcccgctccaaatctggatccagatcaagg
tcacgctccaaatctggatcacggtcaaggtcgagatctaaatctgggtctcggtctcga
tcacggtctaagtccagatctaagtccagatctcggtcccgatcaggctctagatctggg
tcaggcaatgaaggacaggggtctgataggggcaaatctggagatgaggggggcaagtct
ggggcagaggacagcgactga
DBGET
integrated database retrieval system
