Liolophura japonica (common chiton): 135466679
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Entry
135466679 CDS
T09976
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp04120
Ubiquitin mediated proteolysis
ljp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135466679
04120 Ubiquitin mediated proteolysis
135466679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ljp04121
]
135466679
Enzymes [BR:
ljp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135466679
Ubiquitin system [BR:
ljp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135466679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-HC5HC2H
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
135466679
NCBI-ProteinID:
XP_064600380
LinkDB
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Position
6:16701655..16716850
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AA seq
623 aa
AA seq
DB search
MLAKMRSVLLTSLSFVLTGLVIGNAYYQKKQFYPSVVYITKSNPSMAVLYVQAFVFVILM
GKFMRKLFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFH
WLAEDRVDYMERSPVISFIFHTRVICLLSALGLLDLYFVNHAYYSTLLKGASVQLVFGFE
YAILLTVVFMTFMKYILHTIDLQSENPWENKAVYLLYTELSMGLIKVVLYIVFMTIMIKV
HTFPLFAIRPMYLAMRSFKKALHDVIMSRRAIRNMNQLYPDATAEELNSGDNVCIICREE
MVTACKKLPCNHIFHTSCLRSWFQRQQTCPTCRLDVLRMPRPQPAPAPAPPQQPQVPPNF
NNMFFDMNMWMQGGMPPPPAPPGGQPAQGQPPAASTASTSTPSPGTTSPVPPAFSSAPFS
PTAMPPFFSPFNTPFMPSTGFPRPPPDLSQLSTEDLRAMEGNERANVQARLQWLQDIQAL
LDGAMLLINQYNTVASSLSVPRIGLNQAAPLPRSCTVTAGGRSSTTITSSLGKTGARPKS
STGFFPSTPVTQSKPSNKEDSEVKGASGYTPPKEEMIPAWVDPHEENHVDDLHEVRRRRL
QKFSQSETKSEVPKTTSDNLDLD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgttggccaagatgaggtcggttttgttgacttccctcagctttgtgctgacagggtta
gttatcggtaatgcctattatcaaaagaagcaattctacccgtcggttgtgtatatcacg
aagtcgaacccgagtatggcggttctctatgttcaggcttttgttttcgttatactgatg
ggaaagtttatgagaaaactgttctttggtcagctgagggctgcagaaatggagcatttg
attgaacgatcatggtatgcggtaacagagacttgtctggccttcacagtgttcagagat
gactttagcccacgttttgtggccctcttcacacttttactgtttttaaagtgcttccat
tggctggcagaggatcgggtggattatatggagaggagcccagtcatttcatttatcttt
catacaagagtcatatgtttattgtcagccttgggccttctagatttatattttgttaac
catgcgtactacagcacattgttgaagggggcatctgtgcaattagtgtttggctttgag
tatgccattttgttgacagttgtatttatgacatttatgaagtacatacttcatacaata
gacttacaaagtgaaaatccatgggaaaataaagctgtctatcttctgtatacagagctc
agtatgggtttgatcaaggtggtgttgtatatagtatttatgaccattatgatcaaagtt
cacaccttccctctgtttgccatcaggcccatgtatctggccatgaggtctttcaagaag
gcattgcatgatgttattatgtctcgccgtgctatccgaaatatgaatcagctctaccct
gacgccacagcagaagagttgaattctggggacaatgtatgtattatctgtagggaggag
atggtgacagcctgtaaaaaactgccgtgtaatcacattttccacaccagctgtctgcgc
tcctggttccagcgtcagcagacttgtccaacatgtcgcctggacgttttgcgtatgcct
cgcccccagcctgctcctgcccctgctcctccacagcaacctcaagtgcctccaaacttt
aataacatgttctttgatatgaacatgtggatgcagggtgggatgcctcctccaccagcg
ccccctggtggtcagccagcccaaggccaacccccagcagccagcacagctagtacatcc
actccgtcaccagggacaacatcgcccgtccccccggccttcagctcagcccccttctct
cccacagctatgccacctttcttctcaccatttaatacgccttttatgccatctacaggt
ttcccacgtccaccacctgacttatctcagctcagcacagaagatctgcgggcaatggag
ggtaacgagcgagccaacgtacaagcacggttacagtggttacaggacatccaggcctta
ctggatggagccatgttacttatcaaccagtataacacagtagcttctagcctcagtgtc
ccgaggataggtttaaatcaagcagcacctttaccaaggagttgtactgtgacagcagga
gggaggagctctaccaccataacctcctccctggggaagacgggagctagacccaagtcc
tccacaggattcttcccctccacccctgtaacgcagtcaaaaccatccaataaggaagat
tcagaggtaaagggagcctcaggatacacgcccccaaaggaggaaatgatccctgcatgg
gtcgacccacatgaggagaatcacgttgatgacctgcatgaggtcaggcgacgcagactg
cagaaattctctcagagtgaaaccaaatccgaggtgcctaaaactaccagtgacaatcta
gatcttgactga
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