Liolophura japonica (common chiton): 135467083
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Entry
135467083 CDS
T09976
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135467083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135467083
03016 Transfer RNA biogenesis [BR:
ljp03016
]
135467083
Enzymes [BR:
ljp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
135467083
Messenger RNA biogenesis [BR:
ljp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
135467083
Transfer RNA biogenesis [BR:
ljp03016
]
Prokaryotic type
tRNA degradation factors
135467083
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
135467083
NCBI-ProteinID:
XP_064600913
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All DBs
Position
6:30570246..30589865
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AA seq
770 aa
AA seq
DB search
MAAPITSTRRLICGCGKHILHYSKRGGLRPRFNHTNPWKDKSLQGSVEVDIGGRPLKLST
GQFARFADGTATAQHGDTSVLVTAVSKSKPSSSSFLPLTVDYRQKAAAAGRIPTNYLRRE
LGPSEKEILTSRMIDRSLRPLFPPGFFCETQLMCNLLAVDGKNDPDVLSINAASAALALS
DIPWNGPVAAVRVGFIDNEVVINPTRRQMSQSTLNLVITGGERSQVVMLEASAENMLQQD
FMKSIKQGIKETNSIILKIQELQRKYGKPKRELTLPNPYDNELVDTVKSLTSARLEQVLT
DETHDKFSRDNALTEIRQGTLEKLKENYPDKDPGLLMEIINDVVKSVFRSLILDSNKRCD
GRELTQLRDISCKVDLFRPLHGSAVFQRGQTQVLCTVSFDSPDSAMKADPISVMTGGLKE
KNFMLHYEFPPYATNETGRPGAIGRRELGHGALAEKGLRPILPSNFPFTIRLTSEVLESN
GSSSMASVCGGSLALMDAGVPVSDPAAGVAIGLVTRYNPDKPTDIKDYKVLTDILGIEDY
MGDMDFKMAGTKKGITALQADIKIPGLPLRIVMEAIEQARDAKSEILRIMNETLAHPRVG
QKENSPVIETLDVPIAKRSRFLGIGGCNLKKLQSEAGVTVSSIDETKFQVFAPNQSAMDE
AKEMIEEILAEEREPELEFGAVYTATIVEVRESGVMVQIHPKMQPVLIHNSQLDQRKVSH
PSALGFEVGQEITAKYFGRDPVSGRIRLSRKVLFSPATTVIRNFTGNKSD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccataacctccacacgccggttgatttgtggatgtggtaaacacatctta
cactattcaaaaaggggtggtttaagaccacgtttcaatcacaccaacccgtggaaggat
aagtcacttcagggatcggtggaagttgacattggtggcaggccactgaaattatctaca
ggacagtttgccaggtttgcagatggaacagcaactgcccagcatggggacacgtcagtc
ttggttactgctgtcagcaaatccaaaccttcctcttcgtccttcttacctttaacagtt
gactacagacagaaagctgcagctgctggcagaattcccacaaactatctgagacgagaa
ctagggccaagtgaaaaggaaatactaacaagcagaatgatagatcgctcacttcgccct
ttgtttccacctggctttttctgtgagacacagctgatgtgtaacttgttggccgtagat
ggaaagaatgatccagatgtcctgagcattaatgcagcctcagcagcgttagcgctgtca
gatataccatggaatggtcctgtagcggcagttcgtgtaggatttattgataacgaggtc
gtgattaaccccactcgccgtcagatgtcacagagcacattaaacctggtgataactgga
ggagagaggagtcaagtagtcatgttagaagcttcggctgaaaatatgttacaacaggac
ttcatgaaaagtatcaaacaaggaattaaggaaacaaacagtatcatcttgaagattcaa
gaactccaaagaaaatatggaaagccaaagagagaactgactcttccaaacccttatgat
aatgaactggtggatactgtgaaaagcctgacctctgctagactagagcaagttttgaca
gatgaaacacatgataagttttctagagataatgctttaacagaaataaggcaaggtacc
ctggagaagttgaaagaaaattatccagataaagatccgggtttattgatggaaattata
aacgatgtggtgaaaagtgtttttaggagtttaatcttggattctaataagaggtgtgat
ggaagagagctgactcaactgagggacatatcatgtaaagttgaccttttccgacctctt
catggttcggcagtctttcagagaggccaaactcaggtgttatgtacagttagttttgac
tctccagactctgctatgaaggctgatccaatatctgtgatgactgggggacttaaggag
aaaaatttcatgcttcactatgagtttccgccatatgcaacaaatgaaaccggtcgacct
ggagccattggtcggcgggaattaggccatggtgccctagctgagaagggtttacgccca
atattgcccagtaacttcccctttacaattcggctgacttcagaagtattagaatccaat
ggttcatcttctatggcatctgtgtgtgggggaagcctagccctgatggacgctggagta
cctgtgagcgatccagccgctggagtcgccattggactggttacccgatacaatcccgat
aaacctactgacatcaaagactacaaagttctaaccgatatcttggggatagaggactac
atgggtgacatggacttcaagatggctggtaccaagaaaggaataacagcattgcaggct
gatatcaaaattccaggtttaccactaaggatagtaatggaggcaattgaacaggccaga
gatgccaaaagtgaaatcctgcgaattatgaatgagactttggcacacccacgagtgggg
caaaaagaaaacagcccagttattgaaaccctggatgtgcccattgctaagcgatcccga
tttcttggaattggtggatgtaatcttaaaaagctccaatcagaagccggtgtcactgtg
tcatcaattgatgagacaaaattccaggtgtttgccccaaatcagagtgctatggatgag
gccaaagaaatgattgaggaaatcctggcagaagagagagaaccagaactggaatttggt
gctgtctatacagccactattgttgaagttagggaaagtggtgttatggtgcaaattcac
cccaaaatgcagccagttctcatccataactctcagttagatcagcgcaaggttagccat
ccaagtgctttaggatttgaagttggtcaagaaataactgccaagtattttggccgtgat
ccagtcagtgggcgaattcgattatcacggaaagtgctcttctctcctgcaacaactgtc
atcagaaacttcaccgggaataagtcagactga
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