Liolophura japonica (common chiton): 135467101
Help
Entry
135467101 CDS
T09976
Name
(RefSeq) tRNA pseudouridine synthase Pus10-like
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljp03016
]
135467101
Enzymes [BR:
ljp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
135467101
Transfer RNA biogenesis [BR:
ljp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135467101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
135467101
NCBI-ProteinID:
XP_064600932
LinkDB
All DBs
Position
6:complement(32325333..32344659)
Genome browser
AA seq
611 aa
AA seq
DB search
MDAFNQVSLFSGSPEVMGAVAGVLMELGCCPRCTLRFLGERRYHAYRDNHQELYDLVRKL
VSLKPLNGDCATKTADTEMGPDGGSKKPCVICLGVLQEFCTEQFAQKISDCVFDAGFQYN
EHICSLMLPPCIIIREHSLWLHLEDTFPDVYSNCSKESVPTIKDVWKWTLGSNLSEKLCS
PFEIKAQFDICVTFSYSASDSECRFLTELFPDTFKKRKTNKKFGWEVFSRASVIKAVSDT
ADSTFKRYYSVPPSKARDVCKCESIVPSHKQIYLAGRYNKYSRSLSQTPWLIEGKKKTES
SVEELVCNRILPHFKPDDYKFSASGREDVDVRMLGSGRPFVIELINPHIVTLSAESLRAV
QDVVNSHTQDIAVRDLQIVPREETSILKDGEIEKTKSYLALCWCADIFTSRLSEIIQQTK
DLKLFQKTPIRVLHRRSLAVRERTVYSMRAEPLDDHHFHLHLSTQAGTYIKEFVHSDLGR
TTPSLGTVLNTECDILELDVESVDIDWPMRLEAGISSSAGEDGTENAGKSENMEKNKIME
NSGNTEKCKNMENSGNMENSGNMEKSENSGTTDTSANMSKPDSPVKSEDMQKLGSDNLSD
SKGVYLANPPT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggatgccttcaaccaggtatcactgttttctggttcccctgaggtgatgggtgctgtg
gctggtgtactgatggagttaggctgttgcccaaggtgcacactgcggtttcttggggag
aggagataccatgcttacagggataatcatcaggaactgtatgatctggtgaggaagcta
gtcagtttgaagccactgaatggagactgtgcaacaaagaccgctgatacagagatgggc
cctgacgggggatcaaagaagccttgtgttatttgtctgggtgtcttacaagaattttgt
acagagcagtttgctcagaagatcagtgactgtgtgtttgatgctgggtttcagtacaat
gagcacatctgttctctcatgctgccaccctgtataatcatcagagagcattcactctgg
ttacatttggaggacacctttccagatgtttatagcaactgctctaaagaaagtgtccct
acaataaaagatgtctggaaatggaccttgggaagcaatctctcagaaaagctatgttct
ccatttgaaattaaggcccagtttgacatctgtgtcacattttcctatagtgcttcagat
tcagaatgcaggtttttaactgaattgtttcccgacacttttaagaagaggaaaaccaac
aagaagtttggttgggaagttttctctagagccagtgtcatcaaagctgtgtcagacact
gctgacagcacctttaaaaggtattacagtgtcccgccttcaaaagcgagggatgtttgt
aaatgtgagtccattgtgccctcccataaacagatctatttggcaggtagatataacaag
tacagccgcagtctgagtcaaactccatggttaattgaggggaagaagaaaacggagagc
tctgtagaagaacttgtgtgtaacagaatcctcccccacttcaaaccagatgattacaag
ttttcagcttcaggacgagaagatgttgatgtgcgaatgcttgggtcaggtcgccccttt
gtgatagaactgatcaacccccacatcgtgaccctcagtgccgagtcactgcgtgcagtt
caggatgtggtgaacagtcacacacaggacattgctgtcagagatctacagattgtaccc
agggaagagacaagcatcctgaaagatggggaaatagagaagaccaagtcatacctggcg
ttgtgttggtgtgctgacattttcacatctcgcttgtctgaaatcattcagcaaacaaag
gatttgaagctctttcagaaaactccaataagagtattacacagacgttctctggcagtg
cgtgagcgtacagtgtacagtatgagagcagaaccacttgatgaccatcactttcacctt
catctctccacacaggctggaacatacatcaaagagtttgttcacagtgaccttgggcga
accacacctagtttgggaacggtgctgaacacagagtgtgacatcttagaactggatgtg
gagtctgttgatattgactggccaatgcgactagaagcagggatatcaagtagtgctggg
gaggatggaactgagaacgccggtaaatctgaaaacatggaaaaaaataagatcatggaa
aattctgggaacacggaaaaatgtaagaacatggaaaattctgggaacatggaaaattct
gggaacatggaaaaatctgagaactcaggaaccacagacacatctgcgaatatgagtaaa
cctgatagtccagtcaaaagtgaagatatgcagaaactaggcagtgacaatttatctgac
agtaagggagtttatttagctaatcctccaacttga
DBGET
integrated database retrieval system
