Liolophura japonica (common chiton): 135467208
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Entry
135467208 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin-like
KO
K04533
huntingtin
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135467208
04131 Membrane trafficking [BR:
ljp04131
]
135467208
03029 Mitochondrial biogenesis [BR:
ljp03029
]
135467208
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135467208
Membrane trafficking [BR:
ljp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135467208
Mitochondrial biogenesis [BR:
ljp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135467208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
DNApol3-delta_C
Motif
Other DBs
NCBI-GeneID:
135467208
NCBI-ProteinID:
XP_064601041
LinkDB
All DBs
Position
6:complement(40832970..40889282)
Genome browser
AA seq
3075 aa
AA seq
DB search
MATIEKLVKAFEGLKVFQPMGLTVEDVTKKKDQPPTKKEKTQHCNMVADCICAPNMRSIP
DFPKFLGIAMEAFLTLCDDTEADVRMVADECLNRTIKTLLETNLGRLQVELYKEVKKNGP
SRTLRAALWRFADMCHLIRPQKCRPYIVNLMPCIGRICRREEEAIQETLSTAMLKICPVL
MSFANDAEVKSLLRAFLPNLGSATAVTRRTAATSLSAMCQYSRSPNFFSKWLLEALMGSL
LPASQDYEVPKLLGVIQCLRYLLPLIVNPDVKDEGMKGSFGVMRSEREATVTIEQLLQVY
ELLLYHARHRDHNVVTASLEALQQLLRRPHPQLLPILSSSNTITTSTIYDDQNKTLGRGR
SDSNFAGLPSTAEDLEDDMDSEAGSAEQGSTVLQETESGEASEEGEEVQKTMDGDGDDDE
NTETVGDDPPVFMLNDSQYSNVEIGDVNEDKSERSEKSQLSHSSSQDTLLSIRSLSPKRV
PSLRQGLGEDMNGNPEYDPDCDNNLSEPSSPYPGGRSIVVLGDIGTFVDGEVPFLYCTRL
LCQQFLLXGQKGELIPDKAVRISSKSLALSCISNITTMYPTVFFYRLFVSGETDNQNLQD
ILLYAKHSDPQLKGQTAQIIGNYLQAAHLAGGGSFQQWNNSVTVTDAPGKRHNSVKVTYA
PGNRHNSVTVTDAPGKKHNSVTVIYDSGNRHNSVTVTNSPGKKHNSVTVTDAPALSLDEL
LALMTSIIEDESSMAARMGLVAFKLCLPDLLRSSQCHRALQVLLKLLELQHNPYWLVKVE
LLELLGDINFKIICYLETAVTKFSDEMGQCIGELHIQERVLHDVILILLGDEDSRVRHSA
ASMLVREESIDLCPGLFYKADNPQESPVIGSAKEMAENFLSPIIYEWSDELPPLVLGLLR
PYDYDTKHHPPVDIESNLSRIISVIVQKLNKSHSKYLTYGCCHALSLLVDAYMVTQYPHS
WGCGPPMALSARDSPRGPMKKPSRRSLSTSRHVSCDDVALSAPVTISFDEFGTGSGGGPL
SIILSVLTSSSISLDLSTHQDALHVAGHLFAGAAYKCLRPAEETISSNKTSEEGSWRALS
DRILAAKADHLLSHVAKLLNACTHVIDEVTPGPPQMKPSLPSLPTAPSLSPIKRRAKGDK
DASNQNSPSSTPDGKNTPKQTNKEKDKDSDKEKNKKDGIGTFYNLPHYMKLHEVLKGAYS
NYKISLDLNSSDKFCSLLRTALMVFSQILEVTSLQEVGKHADELLAYMKSTVLIEATGTV
LCVQQLLKALFGTNLATQWEPPSSPSSSGKPGKATRLSANIRPGLYHSCFTTPYTHFTQS
LAGATFKATTQMDQEDNSSPLSWLRKRVERKIPAILRPSSKADKNAITSYIRLFEPLVIK
ALKQYTVTSSVELQTQVLDLLSQLIQLRVNYCLLDSDQIFIGFVIKQFEFIEEGQIRSSE
LIIPHIFQFLVILSYEKFHTKSIIGVPKIIQLCDGIMASGQQATTHVIPALRPIVHDLFL
LRGSNKGEGGKELDTQREVVVSMLLRLISYYQVLELLTVVLHQYHKEGEDKWKRLSRQVT
DLVLPLLTKQQVNLDCRMSVDVLHRLFESVAPSVFRPVDSLLKALFCSPQDLNQTVNSQR
WVGLILAVLRVLISQSKEEVILSRLQELHLVVTLFTDTGQGENSPIDDSGSDQPPEEVLA
WYILQVVGSISDVIRDKCCSLSAGRKDCLAVCQGLAHLLLYLTHMFQSGLFRRVATAAMR
VIHQATPPGYFSIQQVNAHFRSLGVYYPTLTLQWCNILILLNYDDQEWWASVMATPKKYM
LSSQSLANGNHLEPNPAPYKCFSSEIIRRGSLILFCDYVCENLTDADHMIWVIINHVNEL
IELSHEPPVQDFISAVHRNSAASGLFIQAIHARCDNFTKPAQMKRSLQCLEAIHLSQSGT
LLTLLIDKFLNTHHLAVARFCHTIACRRVEMLLAENLEDSTSQLPLEDLEKLLQFMKSHG
LCKRHARLVSLLTKLRSVFCPESSLTLSPEKTHPLVLTSSKLRDISINKEWFISIVKEQC
FRANPDSRECARLLQRLEYADTLAVIMTKEFHLTILKECISLSSYRTLVTYNRNQELREA
SPDSETQSQQPMFDVLFQAAQMALFRHINNVVIMLPAPHQALAFDPKLTLKGSQYSVRLE
DFFVDSAWLESILQIAVTVLQYLQSLSQFPWQPAVPMESRSDICRFCLLCLELIHWQLST
NHLPSTEQLETAIQCMAACLQSPHLAAVFCEPEHYLWSCSVIGVIRQILSALVVRPGERL
AVLPNQDHGEEPHTPPYDDSYYYIRACDETSELLHCLKTCLSQSDGEQGRIPDCLRLPIR
VIVIGLARLPVVNTYARTPPLVWRMGWMPVAGGETKTRLPPIPLEYIQDKEVLREFIFRA
LSIGWISRQQFEETWMALLGVLTPLAPEQDHRIAPEEDVERTQSMVLAVRAITGLLVQSG
LHPQPGNPSNSGYEVLPRDKPLAILHTRCGKKLAMVRGLVERELRNLCTKRCMKQCCSVI
WVSIETIWTMIGLLDISASESESEESSGSPPKQPAQTSTTPSPENKASVSGLDIHSCLQL
LLDLYGQWLAPNANPKTPLMLLNAVVKSVVCLSDLFSEVQQYEWMLSLLLDVLKSHPVED
ELVNQYLIVGICKSSAVCGTPDSSVTEKIVKVLDAGLKNTHLPSKVTSLHGILYILEAGM
SDLTKSVLSMTTEFLLKQLNAISLVCITSHQFVLTLWATAFYVVENYNDEIKEGEFQASI
LQMAVNTISNGEENISMAVYLALFRGLERLLLADVLTKQDADTLLKLAVDRLCLPSPVKA
LPALGLMLTCMYTVWGEIPEDKRVAPVAKEDEEEKGKQFDQYSPAPRNTSRSFFDHDNDP
FTIVYQDPESLILAMERVTVLFDRIKKGTPYEARVITRILPAFLADFFPPQDIMNKVIGE
FISNQQPHPQLIAKVVFQVFSSLHQTAQHTLVQDWVMLSLSNFTQRTPVAMAVWSLTCFL
ISASTNPWLRGLLPHVIGRMGKLETVDRKFFCVAAVDFYRQLDDEAKKRAFLSTFQSVAQ
ADSPYSDLLACFSGL
NT seq
9228 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgattgaaaagttggtgaaggcctttgaaggactgaaggtctttcaaccaatg
ggactgacagtggaagatgttaccaagaaaaaagaccaaccaccgacaaagaaagaaaag
acacaacactgtaacatggtagctgactgcatttgtgcacccaacatgaggtccatccct
gatttccccaagtttttgggaattgccatggaagcatttctgacattgtgtgatgacact
gaagcagatgtcagaatggtggctgatgagtgtctgaacagaactatcaagacattactg
gaaacaaacctgggtcgcctccaggtggagctatataaggaggtgaaaaagaatggtccc
tctcgcaccctgagggctgccctgtggaggtttgcagacatgtgtcatcttatcaggccc
cagaagtgcagaccatacattgtgaacctgatgccgtgcataggacgtatctgtagacga
gaagaggaggccattcaagagacactgtcgacagccatgctgaaaatctgcccagtcctc
atgagctttgcaaatgatgctgaggtcaagtccttgctacgggcatttctacccaacctt
ggatctgcaacggctgtcactcgacggacagcagccactagtctgtcggcaatgtgtcag
tactctcgcagccctaacttcttctccaagtggctactggaggctctcatgggctcactg
ttaccggccagccaggactatgaggtacctaagttactaggtgtgatacagtgtctccgc
tacctgctacccctcattgtaaatccggatgtgaaagacgagggtatgaagggcagtttt
ggggttatgaggtcagaacgagaggccacagtgaccattgaacaactactgcaggtttat
gagttgctcctgtaccatgccagacaccgagaccacaatgtggtgacggcgtcactggag
gccctgcagcagttactgcgtcgcccccaccctcagctcttacccatactcagcagttct
aacaccatcacaacctccacaatatacgacgatcagaacaagacactgggcagaggcagg
tctgatagtaattttgcgggcttgccgtcaaccgccgaggacctggaggatgacatggac
tcagaggcaggctctgcagagcaggggtcaactgtgctgcaggagacagaatctggtgag
gcttctgaggaaggggaggaagtgcagaaaacgatggatggtgatggtgatgatgacgag
aacacagagacagtgggagacgacccgcctgtgtttatgctcaacgactcacagtactct
aacgtggagattggggatgtgaatgaggacaagtcagagcgctccgagaagtcccagttg
tctcacagcagcagtcaagacacgctgctgagcatacgcagtctgagccccaagcgggtg
ccctctctacgtcaggggctgggtgaagacatgaatggtaatccagagtatgatcctgac
tgtgataataacctgtctgaaccctcgtccccttatccaggggggcgctccatcgtcgtg
ctcggggacatcggaacctttgtggatggggaagtcccgttcctttactgcacccgtctg
ctgtgtcaacagtttttattgnctggacagaaaggggagttaatcccagacaaagcagtt
cggatcagcagcaagtccttggctctcagctgtatatccaatatcaccactatgtatcct
acagtattcttctaccgtctctttgtcagtggagaaacagacaaccaaaatctgcaggac
atcctgttgtatgccaagcactcagacccccagctgaagggacagactgctcagatcata
ggaaactacttgcaggcagcacacctggctggagggggtagctttcaacaatggaacaac
tctgtcacagtcactgatgccccaggtaagaggcacaactctgtgaaagtcacttatgcc
ccaggtaacagacacaactctgtgacagtcactgatgccccaggtaaaaagcacaactct
gtgacagtcatttatgactcaggtaacaggcacaactctgtgacagtcactaattccccc
ggtaagaagcacaactctgtcacggtcactgatgccccagccttaagcctggacgagttg
ctggctttaatgacgagtatcatagaagatgagtccagtatggctgccaggatgggtctg
gtggcttttaagctctgcctgcctgaccttctgaggagcagtcagtgccacagagccctg
caggtgctcctcaagctgctagagcttcaacacaacccttactggctggttaaggttgaa
ctgttggaacttttgggtgacatcaattttaaaattatctgttatctggagacagctgtg
accaaattcagtgatgaaatgggacagtgtataggagaactccacattcaggagcgggtg
ttacatgatgtaatactgatcctgctaggagatgaagacagcagagtgcggcattcagcg
gcgtccatgctcgtcagagaagaaagcatagatttatgcccaggactgttctacaaggca
gataacccacaggagagccctgtcattggatcggcaaaggaaatggcggagaatttccta
tcacctatcatctatgaatggtcagatgagttgccccccttggtcttaggactgctgcgc
ccctacgactacgacactaaacaccatcctccagttgacatagagtctaatttatcacgg
atcattagcgtcattgtgcagaagttaaacaaatcacactccaagtatttaacatatgga
tgctgccatgcccttagcctcttggtggatgcctacatggtgacacagtacccccactcg
tggggctgtggccctcccatggcactgtctgctcgggatagcccgaggggccccatgaag
aagccctcccgcaggtctttaagtacttccaggcatgtgtcatgtgatgatgttgcattg
agtgccccagttacgatcagttttgatgagtttgggacgggctcgggtggcggacccttg
tcgatcatcctgtccgtgctgacttcctcctccattagccttgacctgtccacacaccag
gatgctctacatgtggctggacatttgtttgctggagcagcttacaagtgtctgcgacct
gcggaggagaccatcagctctaacaagacgtctgaggaggggtcatggagagccctgagt
gaccggatattggccgctaaggctgaccacctcctttctcatgtagctaagttgttaaat
gcctgtacccacgtgatagatgaggtgacccctgggcctcctcagatgaagccctcccta
ccctccttgccaaccgccccctctctcagccctattaaacgacgtgccaaaggtgacaag
gatgcctccaatcagaacagtccctcatccacccctgatggcaaaaacacaccaaaacaa
acgaacaaagaaaaagataaagattcagacaaggaaaagaacaaaaaagatggtataggc
acattttacaacctgccccattatatgaagctccatgaagtgttaaaaggagcatactct
aattacaagatatccctggacctgaacagctcggacaaattctgctctctgctgcgcaca
gccctgatggtcttctctcagatcctggaggtaaccagtttgcaggaggttgggaaacat
gctgatgagctgctggcttacatgaagagcactgttctgatagaggccacaggcactgtt
ctgtgtgtgcagcagttgctgaaagcactttttggtacaaacctggccacacagtgggag
cccccttcctccccatcaagctcgggcaaacctggtaaagccacccgtctctcggccaac
atccgccctggcctgtaccacagctgtttcacaacgccctacacccactttacccagtcg
ctggctggagcgaccttcaaagccaccacacagatggaccaggaggacaattccagtcct
ctgagctggttgaggaaacgtgtggagaggaaaatacctgccattttaagacccagtagt
aaagctgacaagaatgccatcacctcatatatccgcctgtttgaaccactggtgatcaaa
gctctgaagcagtacacagtgacaagttctgtagagttacagacacaagtcttggacctc
ctgtcacagcttatacagctcagggtcaactactgtctgttagattcagaccagatattc
attggatttgtgataaagcagtttgaatttattgaagaaggacaaataagatcgtcagaa
ctgatcattcctcacatcttccagtttctggtgatattgtcctatgagaaattccacact
aaatccatcattggtgtgcctaagataatccagttgtgtgatgggataatggccagtgga
cagcaggctacgactcacgtgattccggccttgcgtcccattgtccatgaccttttccta
ctgaggggtagtaacaaaggagaagggggcaaagaactggacacccagagagaagttgtt
gtgtctatgttacttaggctcatcagctactaccaggtcttggagcttttgacagtggtg
ttacaccagtaccacaaagaaggagaggataaatggaagaggctctctcgtcaagtcacc
gaccttgttctgcctctgcttaccaagcaacaggtgaacctggactgtcggatgtctgtg
gatgttctacaccgcctgtttgagtcagtggcccctagtgtgttcagaccagtggacagc
ttattgaaggccttgttttgttcccctcaggaccttaaccagacagtaaactctcagaga
tgggtgggactgatcctagctgtcctcagagtcttaatatcacaatcaaaggaagaggtc
atcctgtcaaggttacaagagctccacctggtggtgaccctgttcactgacacaggacag
ggagaaaactctcctatagatgacagtggttctgatcagccaccagaagaagttttagct
tggtatatcctgcaggttgtgggctccatatctgatgtgatcagagataagtgctgtagt
ctatcagctggcaggaaggactgtctagctgtgtgtcagggactagcccatctactcctc
taccttacacacatgttccagtcagggctcttccgtcgtgtggctactgcagcaatgcgt
gtgatccaccaggcgaccccacctgggtactttagtatccagcaggtgaacgctcatttc
cgcagtctgggggtgtactaccccacccttacgctccagtggtgtaacatacttatactg
ctcaactacgatgaccaggaatggtgggcatctgtgatggccactccaaaaaaatacatg
ctctctagtcaaagtcttgccaatggtaaccacctagagcccaaccctgccccgtacaag
tgcttcagctcggagatcatcagaaggggcagcctcatcttgttctgtgattatgtgtgt
gaaaatttgactgatgccgatcacatgatttgggtcataataaaccatgtgaatgagctg
attgagctatcccatgagcctcctgttcaagattttataagtgctgtacatcgtaactcg
gcggctagtgggttatttatacaagctatacatgcacggtgtgataactttacaaagcct
gcccagatgaagagaagcctgcagtgtctggaggccatccacctgtcccagagtggaacc
ctcctgaccctcctcatagacaagttcctcaacacccaccacttggccgtcgcccgcttc
tgccacaccatcgcctgtcgcagggtggagatgctgctggcggaaaacttggaggacagc
acgtcccagctgccactggaggatttagaaaaactgttacagtttatgaagtcccatggg
ttgtgtaaaagacatgcccgcctggtgtcattactgacaaagctgagaagtgtattttgt
ccagagagcagtttgacactgtccccagagaagacccaccccctagtcctgacctccagc
aagcttagggacatctcaatcaataaggaatggttcatctcaatagtgaaagagcagtgt
ttccgtgccaatccagactcaagggagtgtgcacggctattacaacggctggagtatgcc
gacactttggctgtgataatgacaaaggaattccacttgacaatcctgaaggagtgtata
tcgctgagctcgtacagaacactggtgacgtataatcgtaatcaggagctgcgggaagcc
agccctgatagcgagacccagtcacaacaacccatgtttgacgttctattccaagccgct
cagatggccctctttagacatatcaataacgttgtcatcatgttgccggccccacaccaa
gctctggcgtttgatccaaaacttacactgaaaggatcgcagtacagtgttaggttggag
gatttcttcgtggactcggcttggttagagagtattttacagattgcggtcacagtgctt
cagtatttacaatccttgtcacagtttccatggcaaccagcagttcccatggagtcacga
tcagacatctgcagattttgcttgctttgccttgagttgatccactggcagttgtccacc
aatcacctaccgtcaacagaacagctagagacagccatccagtgtatggcagcgtgttta
cagagccctcacttggcggcggtcttctgtgagccagaacattacctttggagctgctct
gtgattggtgttatccgccagatactcagtgctttggtggtacggccaggagagaggtta
gctgtgttgcctaatcaggatcatggggaggagcctcacacaccgccttatgatgactca
tactactacatccgtgcctgtgatgagacgtcagagctgctgcactgtctgaagacctgc
ctctcccagtcagatggggaacagggccggatacctgactgtctgcgtctgcccatcaga
gttattgttataggtttggcacggttacctgtggtgaacacctacgctcggaccccaccc
ctggtctggagaatgggctggatgcctgtggctggtggggaaacaaagacacgccttcct
cccatccccctggagtacatccaagacaaagaagttctcagggagttcatcttcagagct
ctatctataggctggatcagccgacagcagtttgaggagacctggatggccttactgggt
gtcctcaccccactggctcctgagcaggaccaccgcatagctcctgaggaagatgtggag
aggactcagtccatggttttagctgtgcgtgcaatcacaggtctattagtacagtctggc
ctccaccctcagcctggtaacccatccaacagtggctatgaggtgttgcccagggacaaa
ccactggctattctacacacacgatgtgggaagaaattagccatggtacgaggtcttgtg
gagagagagctgagaaatctgtgtactaaacggtgcatgaagcaatgttgcagtgttatc
tgggtatccatagagactatctggacaatgattggcttgttggatataagtgcctcagag
tcggagtctgaggagtccagcgggagtccgccgaaacagcctgctcaaacatccaccacc
ccatctccggagaacaaagccagtgtgagtgggctggacattcactcctgtctacagcta
ttgctggacctgtatgggcagtggctggcgcccaatgctaaccccaaaacaccactcatg
ctgctcaatgctgtcgtcaagtctgttgtttgcctgtcggacctgttctctgaagtacag
cagtacgagtggatgttgtcattgttgttagacgtcctcaagtcccaccctgtggaggat
gaactggtgaaccagtatctcattgtgggcatctgtaaatcctcagctgtctgtggcact
cccgattcttctgtgacagagaaaatagtgaaggttttagatgctggcctcaagaataca
cacctgccaagtaaagttacttcccttcatgggattctttacattctggaggcaggaatg
tctgatctgaccaagtctgtcttatccatgacaacagagttcctgctcaaacagctcaat
gctatttcactggtgtgcatcaccagtcaccagttcgtgcttaccctgtgggccactgcc
ttctatgtggtagagaactacaatgacgaaatcaaagagggcgaattccaggcttcaatt
ctacagatggctgtgaacacgatatcaaatggtgaggagaacatatctatggccgtgtac
ctggccttgttccgaggcctggagaggcttttactggctgatgttcttacaaagcaggat
gcagatactctcctgaaactggcggtggacaggttgtgcttaccaagccctgtcaaagct
ctgcctgccttaggactcatgcttacctgcatgtacacagtgtggggtgagatccctgag
gacaaacgcgtagctcctgtggctaaggaggatgaggaggaaaaagggaagcagtttgac
cagtacagtccggctccacggaacaccagtcgctccttctttgaccacgataacgaccca
ttcaccattgtctaccaggatcccgaatctctcatattagccatggagagagtcactgtt
ctgtttgacaggatcaagaaaggcacgccttatgaagcgcgagtgattaccaggattctc
ccagcatttctagcagacttcttcccaccccaagacatcatgaacaaagtgattggtgaa
tttatatccaatcaacagccacacccacagctcattgccaaggtggtctttcaggtgttt
agctctctccatcagacagctcagcacacgctggtacaggactgggtcatgctgtctctc
tctaacttcacccagcggacgccggttgccatggctgtgtggagcttaacctgtttcctt
atcagcgcctctaccaacccctggctaaggggactactaccacacgtcattggcaggatg
ggtaaactggaaacagtggacaggaaattcttttgtgtggcagccgtggacttctatcgt
cagttggatgacgaagctaagaagcgtgcattcttgtccacattccagtctgtggctcag
gccgactctccatacagtgaccttctggcgtgtttctctggcttgtaa
DBGET
integrated database retrieval system
