Liolophura japonica (common chiton): 135467942
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Entry
135467942 CDS
T09976
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljp03016
]
135467942
Enzymes [BR:
ljp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
135467942
Transfer RNA biogenesis [BR:
ljp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135467942
Prokaryotic type
135467942
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
135467942
NCBI-ProteinID:
XP_064601950
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All DBs
Position
6:complement(35917547..35935026)
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AA seq
523 aa
AA seq
DB search
MFRRVLGKLSHRLKTLRMADILPGSPEVPPVDKTSNAGHGKRELNEDGDGPHDGIKKQKT
EPGPMQGRVDRKRKVAMLMAYSGVGYYGMQINPGFATIEDTLCKALVAAGVIPQEHAVNM
QKMSFQRAARTDKGVSALGQLVSLKMTLNQENIVGAINEHLPDQIRVIGIKRATKGFNSK
NHCSGRSYIYMLPTYAFAPVEKFIDEDYRVADGIIDRVNGVLQNFKGTHNFHNYTSGIKP
NDPSAKRYMVSLECGQPFVRDNVEFAIIRIKGQSFMMHHIRKMIGVTIAIVRGFAGEELL
VKAWGKEKVDIPKAPGLGLMLEQLHYDAYNKKFGSDGMHDPIEWTEFQSTIEEFAEKYIY
SNIVKTEKEERSMFHWLMTLPNHSFDVREPGSTTDMYKAMRNVERLNESLQKQSEESPPE
PTMEHTTDRSEASETLENSKGDNKQCHNTSTANTCISASNENGSHPDKNSKGTEEIDCDE
MKNSNESKDCDEMKNSDESKDCEEIKDPESESNLERDQNRGVS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttcagacgagttttgggcaaactcagccatagattgaagacattgaggatggctgac
attctccctggctcgccggaagttcctcctgtggacaaaacgtccaatgctggtcatggt
aaacgtgaactaaatgaagatggcgatggtccgcatgatggcattaaaaaacaaaagact
gagccaggtccaatgcaaggcagggtggacaggaagaggaaagtggccatgctgatggct
tattctggagttggatactacggcatgcaaataaaccctggatttgccacgatagaagat
actttgtgtaaagccctggtggcagctggtgtcattccacaggaacatgcagttaatatg
cagaaaatgtctttccagcgtgcggctaggactgataaaggtgtgtctgctcttgggcag
cttgtctccctgaagatgacactgaaccaagagaatattgtgggagccatcaatgaacat
cttcctgaccagatacgcgtgattggtataaaacgtgcaacaaaaggatttaacagcaag
aaccactgcagcggaagatcctatatctacatgttacctacttacgcctttgctcccgtt
gaaaagttcattgatgaagactacagagttgctgatggtattattgatcgtgtaaatgga
gttctacaaaatttcaaaggaacacataactttcataactacacttcgggcataaagcct
aatgacccaagtgcaaagcgctacatggttagcttggagtgtggccaaccctttgtccga
gacaatgtggagtttgcaatcatcaggatcaaaggacagagttttatgatgcaccacatc
aggaaaatgataggtgtgacaatagccatagtgagaggatttgctggggaagaactcctg
gtgaaagcttggggaaaagaaaaggtggatattccaaaagccccagggttgggcctgatg
ttagagcagttgcattacgatgcttacaacaagaagtttgggtcagatggaatgcatgat
cccatagagtggactgagtttcagtctacaattgaggagtttgctgagaagtatatttat
agcaacattgtcaagacagaaaaagaagaacgatccatgtttcattggttaatgacactt
cccaatcacagctttgatgtgagagaaccaggaagcaccacggacatgtataaagccatg
agaaacgtagaaagattgaacgagagtctacagaaacagtcagaagaatcacccccagag
cccacaatggaacataccacagacagatctgaggcatcagaaacattggagaattccaaa
ggtgacaataaacagtgtcataacacatcaactgcaaatacttgtatcagtgcatctaat
gaaaatggaagtcatccggacaaaaattcgaagggaactgaggagatagactgtgatgaa
atgaagaactctaatgaaagcaaagactgcgatgaaatgaagaactctgatgaaagcaaa
gactgcgaggaaatcaaggaccctgaatctgagtcgaatcttgagagagatcagaatcgc
ggggtgtcatga
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