Liolophura japonica (common chiton): 135468104
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Entry
135468104 CDS
T09976
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ljp03009
]
135468104
Enzymes [BR:
ljp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135468104
Ribosome biogenesis [BR:
ljp03009
]
Eukaryotic type
Pre-60S particles
Helicases
135468104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
135468104
NCBI-ProteinID:
XP_064602237
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All DBs
Position
6:28725403..28743892
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AA seq
563 aa
AA seq
DB search
MAGTSDESTNVLGFHEMGLDDRILKAVAKLGWSSPTPIQERAIPLALEGKDVLARARTGS
GKTAAFVIPVVQKILLAKQTATEQCVRALVMTPSKELCKQAYNNIQELTSYCSREIKCTD
ISPHVPLLQQKPLLMEKPDIVVGTPSRVLAHLTAGNLSVKETMELLVIDEADLLFSFGYE
QDVKKLLEHLPKIYQAFLMSATLSEDVKALKKLVLHNAVILKLEESQLPEATQLTQYHIK
CEDDDKFALIYTLLKLRLIRGKSIIFVNSVNKSYRLKLFLEQFGILSCVLNSELPTASRC
HIVTQFNDGLYDIIIASDETMLSDPQEKPQHIKKGKRIHKKDEEYGVSRGIDFRHVSNVI
NFDFPVTVDAYIHRVGRTARGDSEGTALSFVNMKEMAQLKLVEDALSDSYGDGEDMFKPF
QFRMEEIEGFRYRAKDALRAVTKVAIREARLKEIKQELLNSKKLKSYFEDNPRDLQLLRH
DKSLHTVKNQPQLKNVPDYLVPPTLKGLSRNGGRNKSRRSGQSNDRKAPAITQGQRKFQK
RQADPLKSFQFAGLSQSKKKKKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcacttcagatgagagcacaaatgtattgggttttcatgaaatgggactggat
gaccgaattttgaaagctgttgctaaactaggctggtcgtccccaacaccaatccaggaa
agagcaattcctcttgccctcgaggggaaggatgttttggctagagcacgaacaggttct
ggaaagacagcagctttcgtgattccagttgtccaaaaaatccttctggcaaaacaaaca
gccacagagcagtgtgtccgagcactggtcatgaccccatccaaagaactctgtaagcaa
gcctataacaacatacaggaattgaccagttattgttctagagaaattaagtgtacagac
atatccccccatgttcctctattacaacagaagccactgttaatggagaagcctgatatt
gttgttggcacccccagtcgagtattggcacacttgactgctggaaacctcagtgtaaaa
gaaactatggagctattggtgattgatgaagcagatctgctcttttcatttggatatgaa
caggatgtgaagaaactgctggaacatcttccaaaaatatatcaagccttcttgatgtca
gcaacgctaagtgaggatgtgaaagccctgaagaagttggttctgcacaacgccgtgata
ttaaaattggaagaatcacaactgccagaggccacacaacttactcagtatcatatcaaa
tgcgaagatgatgataaatttgctttaatctacacattgttgaaactacgattaattaga
gggaaatccatcatttttgtcaattctgtaaacaaatcatacaggttgaagctattttta
gaacagtttgggattctgtcgtgtgtattgaattcagaacttcccacagcctccagatgc
cacattgtgacacagttcaacgatggtttgtatgacatcatcatagcgtctgatgaaacc
atgttatcagatccccaggaaaaacctcagcacatcaagaagggcaaaagaattcataaa
aaggatgaagaatatggtgtatctcgagggatagatttccggcatgtctcaaatgtaatc
aactttgattttccagtcactgttgatgcgtatatacacagagtaggcagaacagctcgt
ggggacagtgaagggacagccttgtcgtttgtcaacatgaaagagatggcgcagctaaaa
ctggtggaagatgctttgtcagattcctatggtgacggggaggatatgttcaaaccattt
caatttagaatggaggagatcgagggcttccggtacagagccaaggatgcattaagagca
gttacaaaggtggccatcagagaagctcgtttgaaagaaatcaaacaagaattgttgaac
tccaaaaagttaaagtcctattttgaagataaccccagagacttacaactgctgagacat
gacaaaagtcttcatacagtcaagaatcagccacagttaaaaaatgtaccagattaccta
gttccccccaccctgaagggtctcagcagaaatggcggtcgcaataaatctcgcaggtca
ggacagtctaatgatagaaaagcacctgccataacccaaggtcaaagaaaattccagaag
cgacaagcagatccactgaagagtttccagtttgctggcctaagtcagagtaaaaaaaag
aaaaagaaataa
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