Entry |
|
Name |
(RefSeq) exosome complex component CSL4-like
|
KO |
K07573 | exosome complex component CSL4 |
|
Organism |
ljp Liolophura japonica (common chiton)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ljp00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135468881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ljp03019]
135468881
Messenger RNA biogenesis [BR:ljp03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135468881
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135468881
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6:complement(28151215..28156242)
|
AA seq |
196 aa
MAAPIICIPGQRICRSDEGHIGGHGTYERNGFIFSSLAGQLNTDSRDGKKVIEVRTSADN
SIVPSVDSVVTARVTGVNPRFCKCLIIAVERTTLREPFRGILRKEDVRATEKDKVELYKC
FRPGDVIISRVLSLGDAYSYLLSTAENELGVVVATSEAGAPMVPISWCEMQCPKTFAKEY
RKVAKVQPKFITSDDT |
NT seq |
591 nt +upstreamnt +downstreamnt
atggcggcgcccattatatgcataccaggtcagagaatttgccgatcagatgaaggacac
ataggcggacatggtacttatgagagaaatggtttcatattttcaagcctggctggccag
ctaaatacagacagcagagatggaaagaaagtcattgaagtgcggacgagcgctgataac
agcatcgtaccttcagtagacagtgttgttacagcaagggtcacaggtgtcaatcctcgt
ttctgtaaatgcttgattatagcagtggagaggaccacattacgagaaccattccgtgga
attctcaggaaggaggatgtgcgtgccacagaaaaggacaaggtggaactgtacaagtgt
ttcagaccaggagatgttattatcagtcgagttttgtcattaggagatgcttactcttac
cttctgagcacagctgagaatgagctgggggttgtcgtggcaactagtgaagcaggtgca
cccatggttcctatcagctggtgtgaaatgcagtgtccaaaaacgtttgcaaaggagtac
agaaaagttgcaaaagtgcagcctaaattcataacatcagatgacacgtga |