Liolophura japonica (common chiton): 135469658
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Entry
135469658 CDS
T09976
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135469658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135469658
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
135469658
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
DUF674
Motif
Other DBs
NCBI-GeneID:
135469658
NCBI-ProteinID:
XP_064604275
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All DBs
Position
1:21888621..21898730
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AA seq
539 aa
AA seq
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MALNGKSQANVQPKSILKRKAQSDDLEADDIAPVKDPKVDRSRSCPYLDTINRSVLDFDF
EKLCSVSLSHINVYACLVCGKYFQGRGQKSHAYTHSVQDGHHVFLNLQSQKFYCLPDNYE
VIDSSLDDIIYVLDPTFTDKHIANLDNHTKMSRAYDGTTYLPGIVGLNNIKANDYCNVVL
QALSHVHTFRNYFLQEQNYKNIKRPPGDQMCLLSQRFGELLRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITEQGDAIDFLSWFLNALHTALGGNKKLSSSVVNKTFRGKMKVYSRKM
PPVDMKEEEKETLLLMEDYKETMDDIPWLFLTCDLPPPPLYPDGLRENIIPQVPLATILS
KFNGVSEKEYKTYKDSTMKRFEITHLPPYIILYVKRFNKNYFVLEKNRTIVNFPVKNVDF
GDLLSPEIRAKHRFTTYDLISNIVHEGEPGAGQGSYKVHILHKGTQKWYEMQDLHVIDIL
PQMITLSESYIQIYELRRDIPNPNFGVVPEKTGEDMEGVAVTKESGTKGETTSQSAKES
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaacggaaagagccaggcgaatgtgcagccaaaatcaatcttaaaacggaaa
gcacagagtgatgatttagaagctgatgatattgctccagtgaaagatcccaaagttgat
cgtagtagaagttgtccttatttagacaccataaacaggtccgtgcttgattttgacttt
gagaagctatgctcagtctcgctttcccacatcaatgtgtatgcctgcctggtttgtgga
aaatattttcaaggccgaggccagaagtctcatgcttacactcacagtgtacaagacggt
caccatgtgttcctcaacctacagtcccagaaattctactgcctgcctgataactatgag
gtcattgattcctctttagatgacatcatttatgtcctggacccaactttcactgataaa
cacatagccaaccttgataaccacaccaagatgtctcgggcctatgatggtacaacatac
ctaccaggcattgtaggtttgaacaacatcaaagctaatgactattgtaatgtagttcta
caggctttatctcatgttcatacgttcagaaactatttccttcaagagcaaaactacaaa
aacataaaacgtccgcctggagaccaaatgtgccttctgagccagcgttttggcgagttg
ctacggaaactgtggaatccacgtaacttcaaggctcatgtgagtcctcacgagatgcta
caggctgtggttctctgtagtaaaaagacatttcaaatcacagagcaaggggatgctata
gatttcctgtcatggtttctgaatgctcttcacactgctttagggggaaataagaagttg
tccagcagcgttgtaaacaagacgtttcgagggaaaatgaaagtctattcaagaaagatg
cctccagttgatatgaaagaagaggagaaagagacattacttcttatggaagattacaaa
gagacgatggatgacattccgtggttgttcctcacctgtgacctgccacctccaccgctt
tatccagatggactgagagaaaacatcatcccacaggttcccctggccaccatcttgtct
aaatttaatggtgtatcagagaaggaatacaaaacctacaaggattctaccatgaaaaga
tttgaaatcacccaccttcccccatacatcatactctatgtcaaaaggttcaacaaaaac
tactttgtattggagaagaatcgaacaattgttaatttccctgttaagaatgtagatttt
ggtgacctgctgtctccagaaatcagagccaagcacaggttcaccacttacgatttgatc
agtaacattgtacacgaaggagaaccaggcgctggacagggctcctataaggttcacatc
ctacataagggaactcaaaagtggtatgagatgcaggaccttcatgtgattgacatcctt
cctcaaatgatcactttatcagagagttacatccagatctatgagttaaggagggacatc
cccaatccaaattttggtgtggtgccagagaagactggggaagacatggaaggagttgca
gttacaaaagagagtggcacaaaaggggagacaacttcacaatctgccaaagaaagctga
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