Liolophura japonica (common chiton): 135469788
Help
Entry
135469788 CDS
T09976
Name
(RefSeq) E3 ubiquitin-protein ligase Rnf220-like
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ljp04121
]
135469788
Enzymes [BR:
ljp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135469788
Ubiquitin system [BR:
ljp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135469788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Endonuclease_7
zf-RING_UBOX
BRX_N
Siva
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
135469788
NCBI-ProteinID:
XP_064604455
LinkDB
All DBs
Position
7:35981105..36015714
Genome browser
AA seq
591 aa
AA seq
DB search
MSNSFDLMMFRFNLWAKPFFPPPQSVGPGMENSTYLPNPLTSPALMVLASTAEATRDGTR
HPAPHPFPGQGVADKDGMVSPYSSSFPTMYRQGDPFPSPMYAPLPPFVRPSLERGVGFIN
PGGGSAFRPVSTTGDASEGYQSAFTPAKRSKHEESETTGLFSNGRTDRGQLGLEKKHDTS
SNRGSPVVKEERPSSNHSLCDTNSESQSEHGDLGDRNTPDEGRNLRKQRKRSLLDGQTPC
CPVCGITLRSGEVEAHYIMELEKLDKISRNGKKCTRDSTPQGKKGQLSPSTSRAGRESPV
ESDCIPNSRFETYLRIKCNRQNRLSARSRSKRKKPDEAACPICNEKLSGTPEELNDHVEQ
CLKRRGEVEDEPVDVEGDGEQFEEYTWAGQTRVRATTMLQGGFSNFGFQIATKRCGQDED
VDLNVDGDETEVYGKPQFSEADIIPCSSDEPAEDRARQALRGAVLEFGSTPPPSASPSLA
MDLSKSAKDGCENGKENGELPCSDLLEDASMSGSAGEIIKSLKAKLKERDLVKGDKFKCL
ICMEAYSKPLVSTQCWHVHCEECWLRTLGAKKLCPQCNMITSPSDLRRLYL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagttttgatttaatgatgtttaggtttaatttgtgggccaagccgtttttc
ccaccaccccagtctgtgggtccagggatggagaactctacctatttacccaaccctttg
acgtcccctgccctcatggtgctggcaagtacagctgaggcgacccgagacggcacccgg
caccctgcgccacaccctttccctggccaaggggttgcggacaaggatggtatggtttcg
ccctacagcagctctttccccaccatgtaccgacagggtgacccttttccctcgcccatg
tatgcccccctccccccatttgttcgcccctccctggagcgtggggtgggtttcatcaac
cctggaggaggaagtgcatttcgtccagtgtcaaccactggggatgcctctgagggttat
cagtctgcttttactccagctaaacggtcaaaacatgaggaatctgaaactactggactt
ttcagtaatggtcggacagatcgtggtcagttgggcctggagaaaaaacatgacacctcg
tcaaacagaggttctccagtggtcaaggaagagagaccatcaagcaaccactctttgtgt
gacacaaactctgaatctcagtcagaacatggagatttaggggatcgaaacacgccagat
gaaggccgaaatctaagaaaacagaggaagcgcagtttgttagatggccagacaccatgt
tgtccagtctgtggcatcactctcaggtctggtgaggtagaagctcattacatcatggaa
ctggaaaaactggacaaaatctcaagaaatggaaagaagtgtacaagagactctacgcca
caaggaaagaagggccagttgtccccatccactagcagagcagggcgtgagtctcccgtg
gaatccgactgtattccaaactccaggtttgagacataccttaggatcaagtgtaaccgg
caaaacagattaagtgcaaggagtagaagcaagagaaagaagccagatgaagctgcctgc
ccaatctgtaatgagaagttgagcggcaccccagaagaactcaatgatcatgtggaacag
tgcctcaaaaggcgaggggaggtggaggatgagcctgtggatgttgagggggacggggaa
cagttcgaggagtacacctgggcagggcagacacgtgtccgagcaactaccatgctgcag
ggaggattttccaattttgggtttcaaattgcaactaaacgttgtggtcaagatgaagat
gtggatttaaatgtggatggagatgagactgaagtgtatgggaaacctcaatttagtgaa
gcagatatcatcccatgtagctctgatgaaccagctgaggatcgagccaggcaggcattg
cgtggagcagttctagaatttggttcaacccctccacctagtgcatctcccagtttagca
atggatctaagcaaatctgccaaggatggttgtgagaatggtaaagagaatggagagcta
ccatgttcagacctattagaagatgccagtatgtcaggcagcgcaggggagataataaag
tcactgaaggcaaaactgaaggagagggatctggtgaagggagataaattcaaatgcctc
atttgtatggaggcatactccaaaccactggtgtcaacacagtgctggcatgtccattgt
gaggagtgctggttgagaaccttgggtgccaagaagttgtgcccacagtgtaacatgatt
acctccccttctgacttacgacgactctacttataa
DBGET
integrated database retrieval system
