Liolophura japonica (common chiton): 135469842
Help
Entry
135469842 CDS
T09976
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135469842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135469842
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135469842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Ras
AAA_22
KI67R
Motif
Other DBs
NCBI-GeneID:
135469842
NCBI-ProteinID:
XP_064604526
LinkDB
All DBs
Position
7:complement(27857415..27885010)
Genome browser
AA seq
697 aa
AA seq
DB search
MARHRNIRTMNIDDEYYEEDTVYGHSVPDDDYCISPATAAQFTFNRERKTDLSSYMGQEE
IPEEEGEESDSDHHDSLSDSRDFKRPKLSDQDELRLNSCLEEVRGILGDTFPDNTLITTI
IDQGYDTQKALNVLLSQQDAPKPQREPRQNRRARSQASAFAPSPPVVTLKNPVPRVVTVK
ANDGTAAKAADFSKVITPQNEKKLAKDSENDTNTKLASLSMEPPSDVVDMATPQKDGDGD
KSTGAIPKSSKNRQDQAKMMEEYRKRQGSKDLINLVVIGHVDAGKSTLMGHLLYQLGAVN
KRTMHKYEQEAKKVGKGSFAYAWVLDETEEERSRGVTMDVAQTCFQTDSKTVTLLDAPGH
KDFIPNMITGAAQADVGILVVNATRGEFETGFETGGQTREHALLVRSLGVSQLIVAINKM
DTVDWTQKRFDEIVKKMSQFLKQAGFKDSDLSYVPCSGLSGENLTQPVQEPRLSSWYSGP
TLLKQIDKFRPPVRPIDRPFRLCVGDIFKGVGSGFTVSGRVESGTIQNGDKVLVMPAGEV
GTAKGVFIETETSNYGFAGDHVGITITGVDINKVTVGSILCDPANPIHSATLIRARVVVF
NIPLPLTKGYPVVFHYQSLSEPAVIKRLICQLHKTSGEVVKKRPKCLTKNSNAVIELELE
RPVCLELYKDFKDLGRFMLRSSGQTIAAGLVEEILAS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacacagaaatatccggactatgaacatcgatgatgagtattatgaagaagat
acagtgtatggccactcggttccagacgatgattattgcatatcgccggccacagcggca
cagtttacgttcaacagagaacgtaagacagatctgtccagttacatgggtcaggaggaa
atcccagaagaggaaggggaggagagtgacagcgatcatcatgactctctcagcgactcc
agagatttcaaaagacctaaactcagtgaccaggatgaattacgactgaatagttgtcta
gaggaggtgcgaggaatcctgggggacacatttccagacaacaccctcatcactaccatt
atagaccagggctatgacacacagaaggccttgaacgtcctgctgtctcaacaagatgcc
ccgaaaccccagcgtgagccacgacagaacaggagagctcggtcacaagcttctgccttt
gctccatcaccgcctgttgttaccctgaagaatccagtcccccgtgtggtgacggtcaaa
gctaatgatggtacggcggcgaaagcagcagatttctccaaagtcatcaccccacagaat
gagaagaagcttgccaaagattcagagaatgacacaaatacaaagctggcctcgttatca
atggagccgccttctgatgttgttgacatggcaactccacagaaagatggagatggggat
aaatcaactggtgctattccaaaatcatcaaaaaatcgacaagatcaagccaagatgatg
gaagagtataggaaacgacagggaagcaaagatctcatcaatcttgttgttataggtcat
gtggatgctgggaagagcacattgatgggacatttgctgtatcagttaggagctgtcaat
aagaggactatgcataaatatgaacaggaagccaaaaaagtgggcaagggctcatttgca
tatgcatgggttctggatgagacagaagaggagaggtcacgaggtgtgacaatggatgtg
gcacagacatgctttcagacggacagtaaaactgtgacgcttcttgatgctccaggccac
aaagattttatcccaaatatgatcacaggtgctgcacaggctgatgttgggattttagtt
gtcaacgccacacggggagaatttgagacaggatttgagactggtggtcagacgagagag
catgcccttcttgttaggtccctgggagtgtctcagttgattgtggcaattaataaaatg
gacacagtggactggactcaaaagcggtttgatgaaatcgtcaaaaagatgagtcagttt
ctcaaacaagcaggttttaaagactcagacttgtcatatgtcccttgcagtggactcagt
ggtgaaaatctgactcagccagtccaggagccaaggttgtcttcctggtacagtgggcca
accttacttaaacagattgataaattccgcccacctgttcggcctatcgaccgaccattc
cgactctgtgtgggggacatttttaagggtgtgggcagtggttttactgtgtcaggacga
gtggagtccgggaccatacagaacggggataaagtcttggtgatgcccgctggggaagtg
ggcacagctaagggtgtttttatagagactgagacctccaactatgggtttgcaggcgac
catgtgggcattaccataactggtgtagatatcaataaagtcactgtaggtagtatatta
tgtgatccagccaaccctatacacagtgctacattaatcagggccagagtagtcgtattc
aacatccccttgcctttaaccaaaggctatcctgtggtatttcattaccagtcattaagt
gaaccagctgtgattaaacgcctcatctgtcagctccacaaaacctcaggagaagtggtg
aaaaaacgacccaagtgtctgaccaaaaatagcaatgctgtgatcgagttggaactggag
agaccggtgtgtttagaactgtacaaggattttaaagacctggggagatttatgttacga
agcagtggacagaccatagctgctggactagtggaagagattcttgccagctga
DBGET
integrated database retrieval system
