Liolophura japonica (common chiton): 135470063
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Entry
135470063 CDS
T09976
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ljp04131
]
135470063
Membrane trafficking [BR:
ljp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
135470063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
DUF5703
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
135470063
NCBI-ProteinID:
XP_064604852
LinkDB
All DBs
Position
7:34451920..34486646
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AA seq
1409 aa
AA seq
DB search
MMYFPVGWPKCLKLPNEKQCSGLKYIISNHDRALFAIVTADSVSVWYCKPSVLLCCYTQS
ALHQQEVGTFDQAEWKADSCMLAVTTTFGYVVFFCVDLDSSVPYRCSLYVQRDSRASGGK
QPSNIVTSDEVPAVRLTLVVQVQLSAQVTSLLDVKDELAVSLTDGWLKKIKWDGNVNNNT
SVHLQDISLSTDLQFARVNSVQDASVHMISMDYSPLLGGYALVLSNGRGIFLPASNLRSR
ANSPRGIWAPDLSDAACVAVNHQYRLIAFGCHSGSGMVYSIDDAVGALVISHRLTVSSKD
YPDAGQVGGCVRILQWTPDGKAIALGWQKGGFSLWSVFGSLLVCTLGSTSCTYNNYGASE
DESIQSPVIVKSMEWGAEGYHLWMACETESERNNHTTCPHLLQYSLVKSALTVNPCMPNH
EHLFLQGEDKLFLTTGDMLLNLSSQTQPFREGASGGSGCGGLIGHKQWQLIPISPSYLTP
NWPVRYAAIDQTGQCVAVAGRTGLAHYALFTRKWKLFGNETQERSMAVTGGITWWKDFIC
VGCYNMLDQRDEMRCYPRSCKLDNTFAAVAKVPSQILLLNTFRNLLVVFCADLHFMFYSL
ERKNTQNNPSLTITKLQEVAIANFIPHPICVTAINLTSLRTESGMKTPEHSDEAESIMLN
VAGKLILFQHDHSGPQIKEEEEHNYRPLPFCAPCVVATNVENVWMTARVEGDKKQLMEAL
WLSCGAQGMKVWLPLFPKGEQKTHNFMSKRIMLPFKVEIYPLAVLFEEAVILGADTDVMS
YGPFCPNSQSGALEKLPYYSVERTSQIYLHHILRQLLRRNLGVHALDLAGCCTELPYFPH
VLELLLHEVLEAEATTKDPVPDPLLPRVAAFIQEFPEFLQTVVHCARKTEVALWPYLFNT
VGNPKDLFEECLVNNQLDTAGSYLIILQNLEKPLVSRQHATMLLDSTLEKGEWELARNMI
RFLKAIDPAEAESPPVTPPIRVSSTSSYTPSYPSSPLTPQDVNPFSYGVSRMRNSSGSLT
DTKDLGITKEKIRQTKSDAQHVSLRRQNSKHKEEPTADQFFMDVILCRHARKLLSKHRLR
DLGAFAGNMEDFHLVSWLRKERLRAAKVEDFVMALHEIHRSFQWPYPISSQTVFQQLVKS
MAGKFYISASNSTASSSRLSEEDLAGMSPPELEVPTTMFKPPGVFKQPPPDLLTGVDISG
EVFLKPTLPKEDGSVATVDMSDTSSLQGDSEMPSESSTINDRLSAELEELSHELANKGPH
QSEIELRYLLHLMLEAGCLEWALIIAVVLRDIVAVDRTVNTASLTETPIEIVGRMREGLS
YIELWADTECIGYKPFLNKLRGQIETLNKIIEQAPSRSHLTSTSSTESGAAAEISMPSSP
ELDQSAEEESVKTDNEQEEEQPSENCTIS
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttcctgttggctggcccaaatgcctcaaactgccaaacgagaagcagtgt
tcgggtctaaagtacatcatcagtaaccatgatcgggctctgtttgcgattgtgacagct
gatagcgttagtgtgtggtactgtaagccatctgtgttactctgctgttacacccagtca
gcattacaccaacaggaagtcgggacatttgatcaggcagagtggaaagcagactcctgt
atgttagcagtcacgaccacctttgggtatgtggtgtttttctgtgtggatctcgactcc
agtgtgccctatcgatgctccctctatgtacagcgggattcacgagcaagtggaggaaaa
cagccttcaaacatagtcacatcagatgaagtgcctgcagttagactcacacttgttgta
caagtgcagctgtccgctcaagttactagtttattggatgttaaagatgaactggctgtc
tcgttgactgatggctggttaaagaagataaaatgggatggaaatgtcaacaacaacaca
tcagtacacttacaagatatatctctgtcaacagatctccagtttgcgcgtgtgaattca
gttcaagatgcatcagtccacatgatttctatggactacagtcctttactcggagggtat
gcattagtgctcagtaatggcagaggcattttcttaccagcttcaaatttaagatcacgt
gcaaattctccacgtggtatctgggccccagatctgagtgatgctgcatgtgtagcagtc
aaccatcagtatagactcatagcctttggttgccacagtggcagtggcatggtctacagt
attgatgatgctgttggtgctctggtcatctcccacagactgactgtctccagtaaggac
tatcccgatgctggtcaagttggaggatgtgtccgcatactccagtggacaccggatggt
aaagcaatagccctgggatggcagaagggaggcttctccctgtggagtgtgtttggatct
ctccttgtctgcactctaggctcaacctcctgtacatacaataattatggtgcttctgaa
gatgaaagtatacagtctcctgtaatagtcaaatcaatggaatggggtgcagaaggctat
catttatggatggcctgtgaaacagaatctgagagaaacaatcacacaacatgcccacat
ttgttacaatattccctagtgaaaagtgctttaacagtcaatccatgtatgccaaaccat
gagcacctgttcctgcagggtgaagataagttgtttttgaccacaggggacatgctgttg
aatttgtctagtcagacccagccgttcagggaaggggcctccggtggctcaggctgtggg
ggacttattggccacaaacagtggcagcttatccctatctctcccagctaccttaccccc
aactggcctgttcggtatgcagctattgatcagacaggtcagtgtgtagccgtagctggg
agaacaggtctggcacattacgctctctttaccaggaagtggaagctctttggaaacgaa
actcaggaacgatccatggctgtaaccggtggtattacatggtggaaagatttcatctgt
gttggctgttacaacatgttggaccagagggatgagatgcgttgttacccaagatcatgc
aaattagacaacacgtttgcagcagtagctaaagtcccttcccagatcttgctgcttaac
acattcaggaacttactggtcgtcttttgtgcagacttacacttcatgttttatagcctg
gagaggaagaatactcagaacaatcccagtctgactataaccaagctacaggaagttgca
attgcaaacttcatccctcaccctatctgtgtgacagccataaatctcacatcattgaga
acagagtcaggaatgaagactcctgaacatagtgatgaagccgagagtatcatgctgaac
gtggcgggtaaactcatcttattccaacatgaccactcagggcctcagatcaaggaggaa
gaggagcataattacagacctcttccattttgtgctccatgtgttgttgccacaaatgtg
gagaatgtctggatgacagccagagtagaaggtgacaagaaacagctcatggaagctctg
tggctgagctgtggagcccaggggatgaaggtgtggttgcctctctttcccaagggtgaa
cagaaaactcataatttcatgtcaaaaagaatcatgcttccatttaaagtggaaatatat
cctttagctgtactatttgaggaagctgtgatattaggggctgacacagatgtgatgtcg
tatggtccattctgtcccaatagccagtcaggggccctggagaagctgccctactactct
gtggagagaactagtcaaatttacctgcatcatattttaaggcaattattacggagaaac
ctaggtgtccatgctctagacctggcaggctgttgcacagaattgccctacttccctcat
gtcctggagctcctcttacatgaagtcctggaagctgaagctacaaccaaagaccctgtt
ccagacccattactgccacgggtggcagcctttatccaagagttcccagaattcctgcag
acagtggttcactgtgccaggaagacagaggtggccctatggccttaccttttcaacaca
gtgggaaaccccaaagatttgtttgaagagtgtctggtgaataatcaactggacacagca
ggatcctacctcattatcctacagaacttggaaaaaccactggtcagcaggcagcatgct
acaatgttactggactccacgctggagaagggagagtgggagttggctaggaacatgatc
agatttctcaaagctattgatccagcagaggcggaatcgcccccagtaactccccctatc
cgagtctccagcacatcctcatacacccctagttaccccagctcgcccctcacccctcag
gatgtcaaccccttcagctatggtgtctcacgcatgagaaactccagtggctccctcaca
gacaccaaagatctgggaatcaccaaagaaaaaatccgacaaacaaaaagtgatgctcag
catgtcagtttaagaagacaaaactccaaacacaaggaagagcctacagctgatcagttt
ttcatggatgtaattctatgtcggcatgctcggaaactactgagtaaacataggctgaga
gaccttggggcatttgctgggaacatggaagatttccacctagtttcctggctaaggaaa
gaaaggttacgggcagccaaagtagaagactttgtgatggcgctccatgagattcaccga
tcgttccagtggccgtatccgatctcttcccaaacagtgtttcagcagcttgtcaaatct
atggctggtaaattctacatttctgcatctaacagtacagcaagttcaagtcgcttgagt
gaagaggatttggcaggaatgtcaccacctgaactggaggtcccaaccacgatgttcaaa
cctccgggagtattcaaacaacctccaccagatttactcacaggagttgatatctccggg
gaggtcttcttaaagcccacacttcctaaagaggatggcagtgtggctactgtagacatg
tcagacaccagttcccttcagggggactcagagatgccatcagaaagcagcactataaat
gaccggctcagcgcggaactggaagagctctctcatgaactggccaacaaagggccacac
cagtcagaaattgaactcagatatctgctacacctgatgttggaagctggatgtttagag
tgggcactcatcattgctgtggtcctgagggacatcgtggctgtggatcggactgtgaac
acagccagcctcacagagacacccatagagatagtcggcagaatgagagaggggctgtcc
tacattgagctgtgggcagatactgaatgcattggttacaagcctttcctgaacaagttg
cgtggacaaatagagacattaaacaagattatagagcaggcgccatctcgctcacatctg
accagtacgtcttccacagaaagcggcgccgcggccgaaatctcaatgccttcgtctcca
gagctggaccaatccgcagaagaagaatccgtaaagacagacaacgagcaggaggaggaa
caaccatcagaaaactgtacaatctcctag
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