Liolophura japonica (common chiton): 135470510
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Entry
135470510 CDS
T09976
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135470510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljp03021
]
135470510
Transcription machinery [BR:
ljp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
135470510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
135470510
NCBI-ProteinID:
XP_064605563
LinkDB
All DBs
Position
7:28049897..28065583
Genome browser
AA seq
514 aa
AA seq
DB search
MASTSQAGTSAGSSQEFVVRVPRDRQKKLSMLKFAASLNVDFQKMGETPVKLERENNFKE
YKSAYDIDSLPKFGAGSEFGREQKEEARRRRYGIIRKKYNPNNQPWLMKIGTGKQAKKLK
GVREGTVSENTSYYIFTQCPDGAFEAAPVEEWYNFTPVIKYKYLNSDEAEEEFSKRDRIM
NYFNVMLKKRIKNDDKEVEMEEAEKIVQNKSKKKSKDFLLTDMDDWVALSDEDDEENEEE
KEEKEDEESKGKKKKKKGGPDSVKKKKNAKSNSDDEAIEESDEGDFDDREVDYMTGSESS
LSDLEDRDKADKYEEKGVDEERGLRKLIDSEEESEEETKENENEETAEEKPKEEGNASNS
DSSNSSSDSESDIEKDESISSALFMQKKNGGDKKKGDKPSSRSATPNTLEKEDKLSARKR
KLENDSGSAKRSRTESPVNSSQGFTSEGITEDAIRRYLTRKPMTTKDLLSKFKSKKISMS
TEQMASTIAQLLKRISPETKYVNDVLYLSLKTPV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaagtcaggctgggacttcagctggctcaagccaggagtttgttgtcagg
gtgcccagagacagacagaaaaagctgagcatgctgaagtttgctgccagtctgaatgta
gactttcagaagatgggagagacaccagttaagttagaacgagaaaataatttcaaagaa
tacaaatctgcatatgacattgactctctgccaaagtttggagctggcagtgaatttggg
agggaacagaaagaagaagctcgaagaagaagatatggtataatacgtaaaaagtataac
ccaaacaatcagccatggctaatgaagatagggactgggaaacaggcgaagaagctcaaa
ggtgtgcgtgagggcactgtatcggagaatacgtcttactatatcttcacccagtgccca
gatggagcgtttgaggccgcaccagtggaagagtggtacaacttcacaccggtcatcaag
tacaagtacctcaattcagatgaggctgaagaggagttcagcaagagagaccggatcatg
aattacttcaatgtcatgttgaagaagaggataaagaatgacgacaaggaagtagagatg
gaagaagcagaaaaaattgtacaaaacaaatccaagaaaaaaagtaaagattttttactc
actgacatggatgattgggtggcattgtcagatgaggatgatgaagaaaatgaggaagag
aaagaagaaaaagaagatgaagaatccaaggggaaaaaaaagaaaaaaaaaggtggccca
gattctgttaagaaaaagaagaatgccaagagtaattctgatgacgaggcaatagaggaa
agcgatgaaggggactttgatgaccgtgaggtggattacatgaccggatctgaaagtagc
ctgtcagacttggaggaccgggacaaagcagacaaatatgaggagaagggagtggatgag
gaacgaggacttagaaaattgatagactctgaggaagagagtgaagaggaaacgaaagag
aatgagaatgaggagacagctgaagaaaagcccaaagaagagggaaatgcctcaaacagt
gacagcagtaactcctcatcagacagtgagtccgatattgagaaggatgagagcatatca
tcagctctgtttatgcagaagaagaatggtggagataagaagaaaggggataaaccctca
tcaagatctgccacaccaaacaccttagagaaggaggataagttgagtgcgcggaagcga
aaactagagaatgactctggttcagccaaacgttcacggacagagagccctgtcaactca
tcacaaggtttcacaagtgagggcatcacagaggatgcaatacggcgctacctgacaagg
aaacccatgacaaccaaagacttgctgtccaaattcaagtccaagaagattagtatgagc
acagaacagatggccagcactatagcacagcttctgaagaggattagcccagagaccaaa
tatgtcaatgatgtgctgtatctgtcactgaaaactccagtctga
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