Liolophura japonica (common chiton): 135470564
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Entry
135470564 CDS
T09976
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135470564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135470564
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135470564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
HIND
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
135470564
NCBI-ProteinID:
XP_064605653
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All DBs
Position
7:9418128..9425548
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AA seq
330 aa
AA seq
DB search
MANRTVKDAHSVKGTNPQYLIEKITRTRIYECRYWKEECFALTAELMVDKAMELKYVGGI
YGGNIKPTPFLCLVLKMLQIQPEKDIVVEFIRNEDFKYVRALGAVYMRLTGTAIDCYKYL
EPLYNDYRKVRRMNRQGEFEVVHMDEFIDELLREERALDIILPRIQKRNVLEDTNLLDPR
VSALDEDIEDMETSDEEDAMKDGNRSPVGDKKRSGYRDTDRPARSPSPRYRRSRSRSPRK
ERHSKRRSRSKDRDRGHRSSGHRHKDDDDRRHRSKKSKHDHRHRDREDRHRDRHRDRDRG
RDDHRMSKEELEIKEANELRAKLGMAPLRP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcaccgtgaaggatgcgcactcggtgaaggggacaaatccccaatacctg
atagaaaagatcaccagaacacgtatatatgaatgcagatattggaaagaagaatgtttt
gctttaacagccgaactgatggtggacaaagcaatggagcttaaatacgttggaggaatt
tatggaggaaatatcaaaccaacaccgttcttgtgtctcgtgctcaaaatgttacagatc
caaccagagaaagacattgtcgtggagttcataagaaatgaagatttcaagtatgtgaga
gctctgggagctgtgtacatgaggttgacaggcacagctattgactgttacaaatatcta
gaacctttatacaacgactacaggaaagtgcgccgcatgaacagacaaggggaatttgaa
gtggttcacatggatgaatttattgacgaacttttaagggaggagcgtgctctggatatc
atattacccagaattcagaagcgaaatgtgttggaagacacaaacttgttagacccccgt
gtgagtgctttggacgaggatatagaggatatggaaacttccgatgaagaagacgcaatg
aaggatggcaaccgaagtccggtgggtgataagaagcgaagtggttacagagatacagac
agacctgcccgcagtccgtccccgcgatatagaagaagccgcagtcgttcacccagaaag
gagcgtcattccaaacgaagaagtcggtcgaaggacagagacagaggtcataggtcatca
ggtcacagacataaagatgatgatgacaggaggcacagaagtaagaagagcaaacatgac
caccgacatcgtgatcgagaagatcgacatcgtgatcgtcacagagacagagatcgaggc
agagacgatcacagaatgtccaaggaagagctggaaatcaaggaggccaatgaactgaga
gcaaagcttggcatggccccattaagaccataa
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