Liolophura japonica (common chiton): 135470760
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Entry
135470760 CDS
T09976
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03013
Nucleocytoplasmic transport
ljp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135470760
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135470760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135470760
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135470760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
135470760
NCBI-ProteinID:
XP_064605869
LinkDB
All DBs
Position
7:complement(23987235..24011554)
Genome browser
AA seq
1619 aa
AA seq
DB search
MSNDGLGKVRQKRSHGPNKPYERRKSLLGRVTDTVKDLIAPSWLSGLVGKSSSDHAQREP
PGDIAEQSEDEQFMSPMQSPPNQTHGISMSDNRVSLSDNRVSMNHHGKPGGVNAHLNYPG
PSGVNTPVLQNSRPARKLETTQASLGLSRPPLPSQPGPSHTAPQTDDNMSDHSDGSKSTS
GCSSMIPHPDKREYQREILQLNESSLQKLKDQLMVPGALTSSTPLPSAAQARVSQDTTIL
HRPDDPGVSSIAAVSPANVTLSKNWSSSFQTSRLRDQTAKSKPSFNMSLFGAPGAGNTSL
FGESLHESMFYPGKVGYGGASQFRKGKNRSTAPYEIAAPYRTKIKARPVSKPSSDAITSA
TAKRILETLERMSTPLTDAKKIPVDHTLSDSVLSFTPTSYLKKPRLAGSNSSLNRRSLGF
PLRGPPVNQLTTPTIASIARNRQKMSPSVDSTPKPQTTVPVSEPTAVQSQKDSTDIHHFT
DIRKGDEGTEVTLHTKVDSSSQHSNIRRSDTVVLGESGRVGGKMKRDKSHHYSTKKQDED
DEVVEVPNLKTEFTLPVVNMPKFDFGAAPVTASPKKPISISQTSPPRQDGASQSSSVSSM
EFTFSNPIPSTKPDFSPGAGTPKLNFQFSSPINMTEKEKSPPSNMFSFTASKENAEPLVK
KAIQNNTTELKTGSVMDILGTMTRPENNFTVDKNAPSFQFGSSFSTTKPKPKDGLANNSD
APGGGLQAAPQLKTGSVMDILGVKSPPSAESPGGFKPATTLKQGSVMDILGKGSTDSKAD
DAWAKLCAPSDKWECDTCMIRNKPEDSKCVACGSAKPGQSDSKSSGSKPLSGPSGGSLWD
QFKPPEGTWECPTCMIQNKSTSIACVACATSKPASQGTAAPAPPLTNSTGFGSKFLPPAG
SWECDTCMIQNKAQDTSCVACQSSKPGESGSITAGTTVNKSSGPWQCDTCLINNKEDSTK
CIACETPRPGSKSTSGGVTFAPNAFSSGSGFKFDSESVTKDSGSAGGFKFGNFESKGGES
KGGFVFGTTSTAASATATGSSTTSGFVFGNQNSTDTKPSGGGFSFGSSSKDCEKTPLGGG
FKFDSVAKDSEKTDSSTGPSGFVFGKTSEKSDNSKPTGFMFGTSSSKDSTSGTGFGGVTA
EVPLKTDSTSLSSGVGHSAQCIATAPTPKAESTAPNFMFGQSTTDQGSVKSLNNNTEVKP
SQPVSKPAIGGFSFGATPTQNVSEVKPAYGGFSFKKNESGTGGQAASTTTSSDFTGFNAV
KTENTSSDQGSQAVKRTSDDADSEPSAKKAFSFSAGTSSTSTAPVFDFSAGLNASNNGTG
SSDLFKFGQQPNTSTTPSTAPLGTGGFNSITSGNTAPAFGSASSAFGGSSGFGVTQSTTT
TSGFGSTTTPAFGQSTGAFGSGASTTPFGSTSTDSSAFGAGKGQSTTGQDTLFSAKASTF
GGTSTPASVFGSANSFGNSTASSFGTDSTTAFGGFNNTPAFGGSNTFGSGFGSSTPATTA
STAAPSTGGFNFSTPGSFNFGSTAPATSSAVFQFGAKADTGPSAATAPQPPQSQAPPFGL
PQPAQQPAQAFNFSATPNTNFGSSTPFSFNAPATDKNPFSIQASIGGRRIKKAVRKARK
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgatgggcttggaaaagtaagacaaaagagatcgcatggaccaaacaaaccg
tacgaaagaagaaagtctcttcttgggagagtgacagacacagttaaggatctaatagcc
ccgtcttggctctcgggacttgtagggaaaagctcgtctgaccatgcccagagagaaccc
cctggagatattgcggagcagtctgaggacgaacagtttatgagtccaatgcagtcacct
ccaaatcaaacgcatggaatttccatgagtgacaacagggtgtccctgagtgataacaga
gtgtccatgaatcatcatggaaaaccaggtggggtaaatgcccatttaaactatccaggt
ccatcaggtgtgaacactccagtgctacagaatagtcggccagccagaaagctggagacc
acccaggccagcctggggttgtctcggccacccctaccctcacagccaggaccatctcat
accgctcctcaaacagacgataacatgtctgatcatagtgacgggtccaaatccaccagt
ggctgctcctccatgatacctcacccagacaagcgggagtatcagagggagattctacag
ctgaatgagagcagccttcagaagctgaaggatcagctcatggtaccaggggctctgaca
tcctcaacccccttgcccagtgctgctcaggcccgagttagccaggataccactattcta
cacaggccggatgacccaggggtctctagtattgcagcagtaagccctgcgaatgtcaca
ctgtcgaaaaactggagctcaagtttccagacatctcgactgcgagaccaaacagctaaa
tcaaagccttcctttaacatgtctctgtttggggccccaggggcggggaacacttcattg
tttggtgagagtttacatgagtccatgttttacccaggcaaggtgggttatggtggagcc
tcacagttcaggaagggcaagaaccgctctacagctccatatgagattgcagctccatat
cggacaaagataaaagcaaggccagttagcaagccctctagcgatgccatcaccagcgct
acagctaaacgcatattggagaccttagaacgcatgtcaactcctctaacagacgcaaag
aaaataccggttgatcataccttaagtgactcagtgctctccttcacgcctacaagctac
ttgaagaagcctagattggctggtagtaactccagtttgaacagacgctcacttgggttt
cctttgcggggccctccggtgaatcagctaaccacaccaaccattgcttctatagctagg
aatagacagaaaatgtctcccagtgtggattcaacgccaaagcctcagaccacggtccca
gtttcagaaccaactgcagtacagtctcagaaagattctacagatattcaccatttcaca
gacattcgtaaaggtgatgaaggcactgaagtcactctccacaccaaagtggatagcagt
agtcaacattccaatataaggcggagcgacacggtggtattgggcgagagtggtagggtg
ggtggcaagatgaagagagacaaaagccatcattattccaccaaaaaacaagatgaagat
gatgaagtggttgaagtgccaaatcttaagacagagttcacactgccagtagtcaacatg
cctaaatttgacttcggtgcagccccagtgacagcgtcgccgaaaaagcctatatcaata
tcccagacgtccccgcctcgccaggacggtgcctcacagtcctcctcagtcagtagtatg
gagtttaccttctccaaccccatcccaagcaccaagccagacttctcaccaggggcgggc
acacccaaactgaattttcagttcagctcaccaatcaatatgacagaaaaagagaagtcc
cctccaagcaacatgttctcttttactgcttctaaagaaaatgcagagcctttggtgaaa
aaagctatccagaataataccactgagctaaaaactggcagtgtgatggatatattaggg
accatgactagaccagagaataacttcacagtggacaagaacgcgcccagcttccaattt
ggcagcagttttagtaccaccaaacccaagcctaaggatggtcttgctaacaattctgat
gccccaggtggaggactacaggctgctccacagcttaagacaggcagtgttatggatatc
ctgggagtgaagagtccacccagcgcagagagcccagggggcttcaaaccagccaccacc
cttaaacaaggcagtgtcatggacattcttggcaaaggatccactgacagcaaagctgat
gatgcgtgggccaagttatgtgctccgtcagacaagtgggaatgtgacacatgtatgatc
agaaacaaaccagaagacagtaaatgtgtggcctgtggctcagccaaacctggccagtct
gactccaaaagctctggcagcaagcctctgtcagggccctctggtggcagtctgtgggac
cagttcaaaccccctgaaggaacatgggaatgccctacatgcatgattcaaaataaaagc
acaagtatagcttgtgtggcttgtgcgacgagcaaacctgcttcccagggcactgcagcc
ccagccccacctctgacaaacagtacagggtttggttcaaagtttctacctcctgcaggt
tcctgggaatgtgatacgtgtatgatacagaataaagctcaagacaccagctgtgtggca
tgtcagagttctaaacctggagagtcagggtcaataacagcagggacgacagtgaataag
agttcagggccctggcaatgtgacacgtgtctgataaacaataaagaggactcgaccaaa
tgtatagcctgtgagaccccgcggcctggatccaagtcaaccagcggtggagtaacattc
gccccgaatgcattttccagtgggtctgggtttaagtttgactcagaatctgttaccaaa
gacagtggttctgctggtggttttaaatttggtaattttgaatcgaaaggtggagaatcc
aaaggtggatttgtgtttggaactacatctacagctgcttcagcaacagcaacaggctct
tccacaacttcagggtttgtatttggaaaccagaactcaacagacacaaagccatccgga
ggagggttttcctttggttcatcctcaaaagactgcgaaaagacacctcttgggggtggg
tttaaatttgattctgtggctaaagattcagaaaaaacagactcgtccaccggaccatct
gggtttgtgtttggaaagacttcagaaaagtctgacaattcgaaacccacaggatttatg
tttggtacttctagtagtaaagacagtacatcggggacgggatttggaggtgtgactgct
gaagtcccactgaagactgattctaccagcctatcctcgggggtgggtcacagtgctcag
tgtatagccactgccccaactcctaaggctgaaagcactgctcccaactttatgtttggc
cagtctaccacagatcaaggcagtgttaaatcattgaataataacacagaggtgaagcca
agtcaaccagttagcaaaccagctattggtggatttagctttggggcaacaccaacgcaa
aacgtatcagaagttaagccagcctatggggggttttccttcaagaagaatgaaagtgga
actggtggtcaggcggccagtaccaccaccagcagtgacttcacagggtttaacgcagtg
aaaacagagaatacttccagtgatcagggaagccaggctgtgaagaggacaagtgatgat
gctgactctgagcccagtgcaaagaaagctttcagtttttcagctggtacctccagcacg
agcacagcgccagtattcgacttttcagcaggcttaaatgcttctaacaacggtacagga
agtagtgacttgttcaagtttggtcaacagcccaacacctctacaaccccatcaacagcc
cctctgggaacaggagggttcaacagtattacatcgggcaacacagcccctgcattcggc
agtgcttcctcagcatttgggggctcaagtggctttggggtgacccaatctacgacaaca
acctctgggtttggcagtaccacaacacccgcctttggtcagtccactggggcatttgga
tcaggtgcctccaccacgccgtttggctcaacgtcaacagacagctcagcatttggagca
ggaaagggacagtccactacagggcaagataccttgttctctgccaaggccagtaccttt
ggtggaaccagtactccagccagtgtatttggttctgctaacagttttggtaattccaca
gccagttcctttggtacggactccacaacagccttcggtggattcaacaatactccagcc
tttgggggcagtaatacatttgggagtgggtttggcagctccactcctgccactacagca
agtactgcagcacctagcacaggtggttttaactttagcacgcccggcagcttcaacttc
gggagcacagcacctgcgaccagttcagctgtttttcagtttggagctaaagcggatact
gggccatctgcagccacagccccacagccccctcagtcccaagccccaccctttggctta
ccccagcctgcacaacagcctgctcaagccttcaatttctctgcaacgcccaacacaaac
tttggatcatctactccattttcattcaatgcaccagccactgacaagaacccattcagt
atccaggcaagtataggagggagaagaattaaaaaagcagtccgtaaagcccgaaaataa
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