Liolophura japonica (common chiton): 135470810
Help
Entry
135470810 CDS
T09976
Name
(RefSeq) protein shortage in chiasmata 1 ortholog-like
KO
K28108
shortage in chiasmata 1
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ljp03036
]
135470810
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
135470810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
ZIP2_C
DUF4301
TraC-like
Motif
Other DBs
NCBI-GeneID:
135470810
NCBI-ProteinID:
XP_064605923
LinkDB
All DBs
Position
7:28271258..28323481
Genome browser
AA seq
1048 aa
AA seq
DB search
MVPWTKVKADEAFLEGEGQLASCDLKVLTEGLCKSNVETFSKQIPEVTPGDGWEVIPSSN
PESQEALAGMLTTHIVDDCDDNDLQNSSDNGEPHKETFAPYALSCCITGCKDLLEEVITK
EPFQEYLLKLPRVRNLLSCLQQYTVKDPLLEYDSVGEPKGLLRNDRQLEEGSGRQDEVEI
ELKSPQETFTKVPFETSEYLLEETICTTELQPLIYADCLSDFLASCHPEIIKNDSEIGDV
LQKLVESTPGIHLMSGTEHGKFSPCHAQSASFIDINGGSEFKESVSVDEMLLEVPLMLSF
GASETKPSLTEEALGELTFMKLEQDEEVCCFLTPKHSERLYELYWKEEKFFNETLELRLT
EPIIPEPEIHTESLTSELVDLLSLTALTHSIDEELSLPWDLLGLFKNSVVKQPVLENIVL
NWTSGDLDQQNGVLPNLAWVEKLEKYPAALLDDCSDPVLELVKPTSDFVRLRNAILGRQK
RDKLSALPRKVKSVYSRILPQTAVSYPPKTSKKPVIVKPYKKTPVKDDSLNDFLWIIRST
VSSSSTEGNDSSDSRKVQCAEKAVSSKAPVTEDKEKVLSVTMSGEYSEAAMLLSEYIQEA
LHHLFDQRILPPHQHLATLTPDMTRFLVKQMERQDKDQDCYKDLLLVHVVTCVYDMYLHC
SLETGIFCLSGLEERYQQALGGSIVELKQKLFQLQHKLKTNLCLHPKMKEMCVYIEEWLG
KQNSKLESKVLVIVKRDVERLLSELHQTLASCSQLRPVIITSTEQDPAALLNKFDQVECV
ITPARAIQKTFPWSLFNLVVEYEHHPQAGWQTICHQHSIWYLALKLDPTRVCVGAGLVRQ
NRRPQLAVIGSQKLTAHAELLQLLENRFNILIVERDYSSLHTGRSYLHFADITVDVTSGI
CLHSLTDLISPAQLQEMCDKLFSFHQKYTHFCLILCPQFSSCKSLPPAKSTNVDRLQNAL
SQFANTVDDFVIKIVVCKDTEEVARVISTIGEEVVHSQTSENMKNIVEEKEMTPEEEYLL
AFPCFNSMSAKLMLSKTTLEQLMLMNAA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggtgccatggaccaaggtcaaagcagatgaggcttttcttgaaggagaaggccagttg
gctagctgtgacctaaaagttctgacggaaggactttgcaagtcaaatgtggagactttt
tcaaagcagatcccggaggtcacacctggagatgggtgggaggttattcctagttctaac
ccagagtcacaggaagcactcgcagggatgctaactacacatatagtggatgattgtgat
gataatgaccttcagaactcctctgacaatggggaacctcacaaggaaacatttgctcca
tatgccctttcctgctgtatcactggttgtaaagatttgctggaagaggtgataacaaag
gaaccgtttcaagagtacttgcttaagctgccacgtgtgcgaaatctcctgtcatgttta
cagcagtacactgtgaaggatcctctgctggagtatgattctgtaggagagcccaaggga
ttgttgaggaatgacagacaactggaagaaggcagtggaagacaagatgaggtagagatt
gaacttaaatctccccaagaaactttcaccaaagttccatttgaaacctcagagtatctt
ctggaggagaccatttgcactacggagctgcagcctctcatttatgcagactgtctttca
gattttttggcttcatgtcatccagagataataaagaatgattcagagattggagatgtg
ttacaaaaacttgttgaatcaacacctggtattcatctgatgagcggaacagaacatggc
aagttttctccatgccatgcacagtctgcaagttttatagatattaatggaggttctgaa
tttaaagagtccgtgtcagttgatgaaatgctgcttgaggttccactgatgctatcattt
ggtgcaagtgagaccaagccatcactgacagaagaggccttgggagaattgacattcatg
aaactagagcaagatgaagaagtctgttgttttctgacaccaaaacatagtgagagactg
tatgaattatattggaaggaggagaagttcttcaatgagaccttggaactacgtctgaca
gagccaatcataccagagcctgaaatacacacagagtccttgaccagtgagttagttgat
ctcttgtcactgactgcacttactcactccatagatgaggagttaagcttgccctgggac
cttctaggtctgttcaagaatagtgtggtcaagcaaccagtgctggagaatatagtactg
aactggacatcaggtgacctcgatcaacagaatggagtacttccaaacctggcctgggtt
gaaaagctggagaaatacccagctgccctgctggatgattgttcagatcctgtactggaa
cttgttaagcctacatctgacttcgtccggttaagaaatgccattcttggcaggcaaaaa
agagacaagctatctgcattacccagaaaagtcaagtctgtttatagcagaattctgcca
caaacagcggtatcgtaccctcccaagacgagtaagaaaccagtcatagttaagccctac
aagaaaacacctgtcaaagatgattcactgaatgactttctgtggataataaggtctacg
gtttcttcgtccagcacagaaggaaatgattccagtgattctagaaaagtacaatgcgca
gagaaagctgtgtcctccaaggccccagtcacagaagacaaagagaaagtgttgtcagtc
acaatgtcaggggagtattccgaggcagccatgttgttatcagagtacattcaggaggct
ctgcatcacctgttcgaccaaagaatactgcctccacatcagcatctggccactctgact
ccagatatgaccagattcttagttaagcagatggaaagacaagataaagatcaagattgc
tataaagacctgctgcttgtgcatgttgtgacctgtgtatatgatatgtacctacactgt
agtctggagacgggtatcttctgtctgtctggcctggaggagaggtatcaacaggctctg
ggaggcagcattgttgaactcaaacagaaacttttccagttgcaacataaactgaaaact
aacctctgtctacacccgaagatgaaagaaatgtgtgtttacattgaagaatggctggga
aagcagaatagcaaactagaatcaaaggttcttgtaatagtgaagagagatgtggagaga
ctgttgtctgagttacaccaaacactggccagttgttctcagctcaggcctgtgattatc
acaagcacagaacaggatccagcagctctccttaacaagtttgatcaggtggagtgtgtg
ataacccctgctcgggcaatacaaaaaaccttcccatggtcactgtttaaccttgtagtt
gagtatgaacaccaccctcaggctggttggcaaaccatctgtcaccaacacagtatttgg
tacctcgccctcaaactagatccaaccagggtctgtgtgggtgcaggtctggtcaggcaa
aatagaagaccccaactcgcagtgataggatcacaaaaactaacggctcatgcagagctt
ctccagttattagaaaacagattcaatatccttattgtggaaagagactattcttctcta
catactggcaggagttacttacacttcgctgacatcaccgtggatgtgacgagtggaatc
tgcctgcactctcttactgacctgatttctcctgcccagctgcaggaaatgtgtgacaag
ctcttctctttccatcagaaatacactcacttctgtctcatcctctgcccccagttctca
tcatgcaagtctttgccaccagcgaaatccacaaatgttgatagactgcagaatgcattg
tcacagtttgctaatactgtggatgactttgtgatcaagattgtggtttgtaaggacact
gaagaagttgcgagggtgatcagcaccattggggaagaagtcgttcattctcagacttca
gagaacatgaaaaatatagttgaagaaaaagagatgacacctgaagaagagtatttgctg
gcatttccatgcttcaactccatgagtgctaagctcatgctgagcaagaccactctagaa
cagctgatgctaatgaatgctgcctga
DBGET
integrated database retrieval system
