Liolophura japonica (common chiton): 135471103
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Entry
135471103 CDS
T09976
Name
(RefSeq) mRNA export factor-like
KO
K14298
mRNA export factor
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135471103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135471103
03036 Chromosome and associated proteins [BR:
ljp03036
]
135471103
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135471103
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135471103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
WD40_Prp19
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_Nup120_160
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
135471103
NCBI-ProteinID:
XP_064606232
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All DBs
Position
7:38465705..38479405
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AA seq
366 aa
AA seq
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MSLFGGTNFGTATVFGGGTSTSNTSNNAVEVTSPPDDSVSCLKFNPPALQMTFLVAGSWD
NNVRCWEIQPSGQSVPKAQQTHTGPVLACDWSDDGTKVFTASCDKTAKMWDLNSNQAMQI
AQHDAPIKTCHWIKGTSYSCLMTGSWDKTLKFWDTRTPNPMMTIQLPERCYCADVKYPMA
VVGTAGRGLIIYQLENQPQEFKRIDSPLKYQHRCVSIFMDKKTNMPTGFALGSIEGRVAI
HYVNPTNPKDNFTFKCHRSNGQTGGIQDIYAVNDIAFHPGHGTLATVGSDGRYSFWDKDA
RTKLKTSDLFDQSISTCCFNSQGNIFGFASSYDWSKGHEGYDPQKMKPHIYVKSCYDELK
PSAKKS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttggaggtactaacttcgggacagcaactgtgtttggcggaggcacatca
acttcaaacacctcaaataatgctgtggaggtgacttctccacctgatgacagtgtcagt
tgtctcaagttcaaccctcccgcccttcagatgactttcttagtggccggcagctgggat
aataatgtgcgctgctgggaaattcaaccaagtggtcagtcagtacctaaagctcaacag
actcacactggaccagtactagcctgtgactggagtgatgatggcactaaagtgttcacc
gcttcctgtgataaaacggctaaaatgtgggatctcaacagcaatcaggccatgcagatc
gcgcagcatgatgcaccaataaagacatgccattggattaaaggtacttcttacagttgc
ttgatgacaggtagttgggataaaacactcaagttctgggacactagaactcctaatcct
atgatgaccatccagctgccagaaaggtgctactgtgctgatgtcaaatatccaatggca
gttgttggcacggctggccgtgggctcataatttaccagctggagaaccagccacaagag
ttcaaaaggattgactcacctctcaagtatcagcatcgatgtgtcagcattttcatggac
aaaaagacaaacatgcccacaggatttgctcttggcagcattgaaggtcgtgtggccata
cactatgtcaatcctacaaaccctaaagacaattttaccttcaaatgtcacaggtcaaat
ggacaaacaggaggaatacaagatatctatgcagtgaatgacatagccttccatccaggt
catggcacactagccactgttggctcagatggacgctacagcttctgggacaaagatgct
cgcaccaaactgaaaacctctgatctgtttgaccagtccatatcaacctgttgttttaac
tcccagggaaatatttttggttttgcatccagctatgactggtctaagggacacgaagga
tatgacccccagaagatgaaacctcatatctatgtgaagtcctgttatgatgaactaaaa
ccgagcgccaagaaaagctga
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