Liolophura japonica (common chiton): 135471106
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Entry
135471106 CDS
T09976
Name
(RefSeq) DNA repair protein complementing XP-C cells-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135471106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljp03400
]
135471106
DNA repair and recombination proteins [BR:
ljp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
135471106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
135471106
NCBI-ProteinID:
XP_064606236
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Position
7:42143515..42161026
Genome browser
AA seq
872 aa
AA seq
DB search
MPCKRRKRKLPVPEDLGHGSPGKVCVKSQNLDAQRSEAKEGSSNSTSEDDMFAVLMRMEG
PGVAREGSSAMDWNGDSSEEECEWEEVPDHPLLSTEKSQLPSGSVKIRLEVPDIMKKKRK
RDASWREKYYSQLLNRYLKNRQISLHKVHLLCLLAHGLHCVHLCNSPVIRALALSLEPCD
IPRKRVRLVELPTLTKLTKYFFGLIVIDPEQHKSPVNEDTLVRKFCTKVATEKEFVLLFF
AFLSMLGFDTRLIMSLVPLSPKVPLQKVASGEGQNSGKEKKKAEKTRVKDHADSAIACSS
KDTSGGKSLHSSKSAKGKLSKAARSEDNHDSSRKQSKYFKERHNLKKKGSEKKAKGQTAE
KMEKIPKVLKSGGEKESHSGSRSSEPRRSSRNFRSKTRECGDSNYSHEKTKTERSARKGK
ANKEQTMEPEEILLSSSDDFEEEPAKSRTPTYSLKKKYKGKNVPRKILSSESSEESLMQT
EDEQITQGTYLWVEVYLETERKWICVDVIHNVVNKPEMMEKWVKHEMTYVVGFCNDGSVK
DVTPFYASQWLTHTHKQRVDPGWWDETLAPYRSHKVSREKTEDDFLRVQLMMKALPSTIG
DYKNHPLYALSRHLLKFEAIYPETAVPVGFIKKEPVYARECVHTLHSRENWMKEGRVVKL
GETAYKMVKSRPKWKKPKENPDELDLELFGEWQTEIYVPPPPKDGKIHRNEYGNIELFRP
TMLPAGTVHIRIDGLKKVAKKLDIDCVPAMVGWEHHMGYAHPILDGFVVCKEHEELLLTA
WDEEQEIQRQKDIEKKEKRVYGNWKRLIRGLLIQEKLKKRYSLETPAVAKRSSAKASSDE
KATDLALTWPQNRRTAKGKGAPKKCIVEVETL
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcaaaagacgcaagcgtaagctcccagtgccagaggatttgggtcacggttct
cctggcaaagtttgtgtcaaatctcagaaccttgatgcacagagatcagaggccaaagag
gggagcagcaacagtacatctgaggatgatatgtttgctgttttgatgcgcatggagggg
ccaggtgttgcgagagaggggagcagtgccatggattggaatggtgactctagtgaagag
gagtgtgaatgggaagaggtgccagaccatcctttactaagcactgagaagtcccagttg
ccatcaggctcagttaagatacgacttgaggttcctgacattatgaagaagaaacgaaaa
cgagatgcttcatggagggaaaaatattattctcaacttctcaatcgctacctgaaaaat
cgccagatctccctgcataaggtgcacctgctctgcctcttggctcacggattacattgc
gtccatctgtgcaatagccccgtaataagagccctggctctgtctttggaaccatgtgac
attcccaggaagcgtgtccgcttggtggaactcccaactctgacaaaactgaccaagtac
ttttttggattgatagtgattgaccctgagcagcataaatcacctgtaaatgaggataca
cttgtgaggaagttctgtacaaaagtggccacagaaaaagaatttgttttgcttttcttt
gcctttctatccatgctaggatttgacactcgacttataatgtcacttgtcccattatct
ccgaaagtacctttgcagaaagtggccagtggtgaaggacagaattctggcaaagagaag
aagaaagctgagaagactcgggtaaaagaccatgcagactcagccatagcttgtagcagc
aaagatacctctggtggcaagtcattgcattcatcaaagtctgctaaagggaaactttct
aaagcagcgagaagtgaggataatcatgattcaagcagaaaacagtctaaatattttaag
gaaagacataatctcaagaaaaaagggagtgaaaagaaagctaaaggacagactgctgag
aagatggaaaaaatcccaaaagtattgaaaagtggaggagaaaaggaatctcattctggt
tctcgctcatcagaacctcggcggtcttctcgtaattttcgaagtaaaacgagagaatgt
ggtgacagcaattattcccatgaaaagacaaaaactgaaagatctgcaaggaaaggaaag
gcaaacaaagaacagacaatggagccagaagagattttgttgagttcttctgacgatttt
gaggaagaacctgccaagtcaaggactcctacttacagtttgaagaagaagtacaaggga
aaaaatgtgcccaggaagatactgtcttctgagtcctcagaagaaagccttatgcagaca
gaggatgagcaaataactcaaggaacatatttatgggtggaggtctacttggaaactgaa
aggaagtggatttgtgtggatgtcatccataacgtggtaaacaagccagaaatgatggag
aagtgggttaagcatgaaatgacttatgttgttggcttttgcaatgatggtagcgtgaag
gatgtcacaccattctatgcatcacagtggttgacgcacacacataaacagcgtgtggat
cctgggtggtgggatgaaacattggccccttatcgtagtcataaagtctcaagggagaaa
acagaagatgactttttgagagtccaactgatgatgaaagccttaccaagtactatcgga
gactacaaaaaccatccactgtatgcactttctcgacacttgctgaagtttgaagccatc
tacccagaaacagctgtacctgtgggattcatcaaaaaggaaccagtgtatgcccgtgaa
tgtgttcatacgttgcactccagagaaaactggatgaaggaaggtcgtgtggtgaagctg
ggagaaactgcgtacaagatggtgaagtcaagaccaaaatggaagaaacctaaagagaat
ccagatgaattagatctggaactctttggagaatggcagacggaaatctatgttcctcct
ccacctaaagatgggaaaatccacagaaatgaatatggtaacatcgaactgttcagacct
actatgttaccagcagggactgttcatataaggattgatggtctaaagaaggtagccaag
aagttggacatagactgtgtgccagcaatggtgggttgggaacaccatatgggatatgcc
catcctatcttggatggatttgtggtgtgcaaagaacatgaagaattactcctcacagca
tgggatgaagagcaggaaattcagcgccagaaagacatagaaaaaaaagagaaaagagtg
tatggaaattggaaacgtttgatccgagggttacttattcaggaaaagctgaagaagaga
tatagtcttgagaccccagctgttgccaaacgctctagcgcaaaggcatcaagtgacgag
aaagccacagatcttgcattgacgtggccacaaaacagacgaacagccaaaggcaaaggg
gctcccaagaaatgtattgttgaagttgaaacactataa
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