Liolophura japonica (common chiton): 135471163
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Entry
135471163 CDS
T09976
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03018
RNA degradation
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135471163
09123 Folding, sorting and degradation
03018 RNA degradation
135471163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135471163
03041 Spliceosome [BR:
ljp03041
]
135471163
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135471163
mRNA degradation factors
5'-3' decay
Lsm complex
135471163
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135471163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
135471163
NCBI-ProteinID:
XP_064606325
LinkDB
All DBs
Position
7:complement(19091549..19128110)
Genome browser
AA seq
130 aa
AA seq
DB search
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIMKSKGRGEGRGRGGQRGRGGRGAFGGRGGGRGGRGG
PPRQGKGRGD
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctttcattgttgcgaacagcagtaaaccacccaatgttggtggagttaaag
aatggagaaacctacaatggtcatcttgtcagttgtgataactggatgaatattaactta
agagaagtgatctgcacatccagggatggagacaggttttggagaatgccagagtgttac
atcagaggtagcacaatcaaatatctccgaatacctgatgaagtgattgatatggtaaaa
gaggaggtcataatgaagtctaaaggtcgtggagagggcagaggtcgtggaggtcagaga
ggacggggaggtagaggggccttcggaggccggggaggaggaagagggggacgaggtggg
cctcctcggcagggcaaaggtcggggagactag
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