Liolophura japonica (common chiton): 135472141
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Entry
135472141 CDS
T09976
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135472141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ljp03036
]
135472141
03400 DNA repair and recombination proteins [BR:
ljp03400
]
135472141
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135472141
DNA repair and recombination proteins [BR:
ljp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
135472141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
135472141
NCBI-ProteinID:
XP_064607576
LinkDB
All DBs
Position
1:complement(13434289..13476938)
Genome browser
AA seq
1432 aa
AA seq
DB search
MPDDTGILVKSKKAMEPTCIQLVSKESGISAESMDGMMEREESLLVNEETSQSSEVPDGH
DSEHDHLVEEGLGSDGATQPAPSASVLLNDNHSTPKIQNQFHIQTNLIPKASVEEQNSEL
VGLGLEVYNQDDLEQGIMAQVDQAMAKEEEERLKKLIERQLTSVQEDLRATCEELGRIGR
VIRTVTSSKQAETNKEAKKHLEAAKRQRENKLSQMKKLKAKKRALLSKLDGKEMDASLMD
NDEDLQFFDQALTKGGNVETEEERMIKLGEMTPFGTVMKTTDAKKQSAAVVKVAVKNKAP
VVSDFEVFLQKKDDTYSSKKGKALKHKPLGCSKSSHRKPHDSGAKVTYGQPMASTSKSNK
SNWFDEHDKKVYRTDRDFSSAGIKRKLPKLKHNFSGDPELSDPPSDGEEDWEDQEDDSEE
EYRPDRDWGEEDSDYEGQPSPRKKIKAGLKRKKPLGQSCSDEDSGLGVIKGKCKTEKDNY
LSRTRDDGNYNYYQKRLKTYKKTEAARKRKQQEEGLSDSDDEETEFEGGLKVPGKLWSKL
FGYQRTGVKWLWELHCQQAGGIVGDEMGLGKTIQTISFLASIKTSKIKQRPFRYVGLGPC
IIVCPATVLHQWVREFHKWWPEFRVAILHSSGSFTGTEDALIHNIVNQHGILITSYTSLV
HKQDALIQHDWHYIILDEGHKIRNPDAQVTLACKQFRTPHRIILSGSPIQNNLKELWSLF
DFVFPGKLGTLPDFMTHFSVPIVQGGYANASQVQVQTAYKCACILRDTIAPYLLRRMKAD
VKSSVQLPGKSEQVLFCRLTDEQRDIYQEYLDSKECSAILAGRYKVFAGLITLRKICNHP
DISTGGPRVLVGQSTEGDESLEYGYWRRSGKLIVVESLLKLWHKQSQKVLLFTQSKQMLD
ILESFVKDVGYSYLRMDGGTSISARQPLINKYNSNPDIFVFLLTTRVGGLGVNLTGANRV
VIFDPDWNPSTDMQARERAWRIGQSRQVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLKD
PKQRRFFKTNDLYELFTLGTNDNKEGTETSAIFAGTGSEITVSQKVNRFDAMKNEALPVK
RKETKNKVNDADTETSNDKTDKLRALARKLSLKIGQGSLGSHSPSNGVTKDNAELTSSDS
CSQRRKKKKKSKRNKDAEFEGERISHLSKLSEYQPNKKAEDTTENISSHQDDYVLKKLFK
KTGIQGALKHDVIEEASKMDYALVEGEAEKVAREAAAALKKSRRHCMNALSGVPNWTGQQ
GGGMTNSRPRFGRKKNSLIAEPSPKPSSSEFQNGHKDKSEASKAFDGTFAGNKKSTGLFS
SSKQNVMSSGELLSRMRARNVSSCQDDGEEDRTAPPSDAADDKHMELITDIRNFIAFQCH
IDGQASTQELLDEFGVKLPPGDSAKFKAMLRQICDFDRSSDVGIWRLKAAYR
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatgatactggtatactggtaaagagcaagaaagcaatggaacctacatgtatt
cagctagtatcgaaagagagtggaataagtgcagagtccatggatggaatgatggagagg
gaagaaagtttgttagtaaatgaggaaaccagccagtcgtctgaggtgccagatggtcat
gacagtgaacatgaccaccttgttgaggaaggactggggagtgacggtgcaactcagcct
gcacccagtgccagtgttcttctaaatgacaaccacagcacacccaagatccagaatcag
ttccacattcagactaaccttatacccaaggcgtcagtggaggaacagaattcagagttg
gtagggctggggttggaagtctacaatcaggatgatttagaacagggtataatggcccag
gtagatcaagcaatggctaaggaagaagaagagaggcttaagaagttgattgagagacag
ttaaccagtgtacaggaggatctaagagccacttgtgaggagttagggaggattggcaga
gtaattcggactgtaaccagctcaaaacaggcagagaccaacaaagaggcaaaaaaacac
ttggaggctgctaaaaggcagagagaaaacaagctaagccagatgaaaaaacttaaagca
aagaagagagctcttttgtctaagttggatggcaaagaaatggatgctagtcttatggat
aatgatgaagatcttcagttctttgaccaagcccttactaagggaggcaatgtggaaaca
gaagaagaacgcatgatcaagttaggtgagatgacaccttttggaactgtaatgaaaaca
actgatgccaagaagcagagtgctgctgtagtaaaggtagcagtgaagaataaagccccg
gttgtgtctgactttgaggtgttcctacagaagaaagatgacacatactcgagtaaaaaa
ggaaaggcgttgaaacacaaacctctgggttgttccaaatcaagtcatcgtaaaccccac
gattcaggtgccaaagtgacttatggtcagcccatggccagtacttcaaaatctaacaaa
tccaactggtttgatgagcacgataaaaaagtgtacaggactgacagggacttctcaagt
gctggtattaagaggaagttaccaaaactgaagcataactttagtggtgaccctgagtta
agtgatcctcccagtgatggtgaggaggattgggaagatcaggaggatgacagtgaagaa
gaatatcgtccagacagggactggggggaggaggatagtgactatgaaggtcagccctct
cctaggaagaagataaaggcaggtctaaagagaaagaaaccattaggccagagctgttca
gatgaagacagtggactaggtgttataaagggaaaatgcaagacggagaaggacaactac
ctgtcaaggacaagggatgatgggaactataactattaccagaagagattaaagacgtac
aaaaagacagaggctgctcggaaaaggaaacaacaagaggaaggtttgtcagattctgat
gatgaagagacagagtttgagggaggcctgaaagtccctgggaagctctggagcaaactg
tttggctatcagagaacaggtgtcaagtggctctgggagctacactgccagcaggctggg
ggcattgtaggtgatgagatgggactaggcaaaaccatacaaactatcagcttcctagca
tcaatcaaaactagcaagattaaacagaggccatttagatatgtgggactggggccttgt
atcattgtgtgtccagctaccgtccttcaccagtgggttcgggaattccacaagtggtgg
ccggaatttagggtggcaatcctccactcttcaggctctttcactggcacagaggacgct
cttatccataacatcgtgaatcagcatggcattttgataacgtcttacaccagcctggtt
cacaagcaggatgcgttaatccagcatgactggcactacatcatcctggatgagggtcac
aagatcagaaatcccgatgctcaggtcactctggcctgtaaacaattccgcactccccac
cgcatcatcctgtctgggtcacccatacagaacaacctgaaggagttgtggtcgctcttt
gactttgtcttcccaggtaaattgggcacattacccgactttatgacccacttctcagtg
cccattgtccagggaggatatgcaaatgcttcacaagtccaggttcagacagcatacaag
tgtgcctgcatcctaagggatacaattgctccatacttgttgcgcagaatgaaggcagac
gtaaaatcatctgtgcagctgccaggcaaaagtgaacaggttctgttttgccggctgact
gatgagcagagagacatttatcaggaatatttagattccaaggagtgcagtgcaattctg
gctggtcgatataaggtgtttgcaggtttgattacactgaggaagatctgtaaccaccca
gacatctccacaggaggccctcgggttctcgtcggccagtccacagagggggatgaaagt
ctggagtatggctactggcgacgctccggaaagctaattgtggtggagtcactgttaaaa
ttgtggcataaacagagccagaaggtgttgctcttcactcagagtaaacagatgttggat
atcttggaaagttttgttaaggacgttggttacagttacttaagaatggatgggggaaca
agtatatcagcccgccaaccactcattaataaatataatagtaaccctgacatctttgtg
tttctactgacgacccgtgttggagggctgggtgtaaatctaactggggcaaatcgtgtt
gttatttttgaccctgattggaaccccagtacagatatgcaggctcgtgagagggcttgg
agaattggtcagagcagacaagtcaccatctacaggttactcaccacaggtacaatagag
gagaaaatataccacagacaaatatttaaacagttcctgacaaacagagtattgaaagat
ccgaagcaaagacgctttttcaaaaccaatgacttgtatgaactgtttaccctgggaaca
aatgacaacaaggagggcacagaaaccagtgctatattcgctgggactgggtcagagatc
acagtgagccaaaaggtaaatcgttttgatgcaatgaagaatgaagctctacctgtcaaa
agaaaggagaccaagaacaaagtaaatgatgcagacacagaaacttccaatgacaagaca
gataaactgcgagctctagcaagaaaattgagcctaaagattgggcaaggaagtctgggc
tctcattcaccctccaatggggtgacgaaggacaatgctgagctgacatcatcagacagc
tgcagtcagaggagaaagaaaaagaagaaatcaaagaggaacaaagatgcagagtttgag
ggtgaaaggatttctcacctgtctaaacttagtgaatatcagcccaataagaaagctgag
gacacaacagaaaatatctcctcacatcaagatgattatgtgctgaaaaaactcttcaag
aaaacgggtattcaaggtgccttaaagcacgatgtgattgaggaggctagtaagatggac
tatgccttagtggagggggaagcggaaaaagttgctcgggaagccgcagctgctttaaag
aagtcccgccgacattgtatgaatgcactcagtggagttcctaattggactggccagcaa
ggaggtgggatgaccaactcacgaccaagatttggccggaagaaaaacagcttgattgct
gagcctagcccaaaaccctcatcttcagaatttcagaatgggcataaggacaagtcagaa
gcttccaaggcctttgatggaacttttgctgggaataagaagagcacgggtttgttcagt
tcttccaaacagaatgtgatgtcgtcaggggagctgctgtcacgtatgagggcgcggaat
gtcagtagctgtcaagatgatggggaggaggacagaacagccccacccagtgatgctgca
gatgataaacacatggaactcatcacagatatcagaaactttatagcatttcagtgtcac
atagatgggcaggcttccactcaggaactgctggatgaattcggtgtgaaactcccacct
ggtgattcagccaagttcaaggccatgcttagacagatctgtgactttgatcgctcaagt
gatgttggaatttggcgcctcaaagcagcatatagataa
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integrated database retrieval system
