Liolophura japonica (common chiton): 135472178
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Entry
135472178 CDS
T09976
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135472178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135472178
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
135472178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
MnmE_helical
DUF433
Motif
Other DBs
NCBI-GeneID:
135472178
NCBI-ProteinID:
XP_064607623
LinkDB
All DBs
Position
8:complement(12973063..13003308)
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AA seq
1049 aa
AA seq
DB search
MERRERQLRVRNSQGHSIRVVRELYLREDIPCHSPLCLAGCETPLNQGTHTGLAKEVTHY
LIPDAQVTTDYLEILEVTELTGIVFTQSVTDYVQHEGGRRLHNRLKSLIKNGRKGSVLFN
NEFQKFSYCERQAGEALQDWLTRSTYQSSVWYYDHLAGKIPIVMVTENREFLEEHENKKI
NVFVMDMKGYLDTFWSHLSGIDDLFEALTAAKEESVSKAEDEYSGYLPLAVLEAGIKAGR
FVQGNLHVNKHNPMQEAFIKRTSAQSASEASHMDSDILIPGMGTRNRAIHGDSVVVELLP
RPQWKGKSLAIKENEEEQLSNVSGTSPEEEEDMGDVMPTGRVVGILQRNWRDYVVSFSQD
EAGQKNPGRAGKVLVIPWDYRIPKIRISTRQVDTLRECRIIVRIDSWPADSAYPNGHLVK
SLGTIGDIETEVAALLVENTITVAPFSDGQLKELPVNSEDDPWVMEPIEVSRRKDLRTSH
LIFSIDPKGCEDVDDTLSVRKLPNGHLELGVHIADVTYFVPSGSLTDLEAQSRSTTVYLA
DRRYDMLPGVLSSDLCSLISNVDRFAVSVIWELDQQMEVVGVWYGRTVIRSQYKLFYEIA
QAMHDGMSDEELVANIPELQKLHGDTLNKSLAELKEAVNMLMHVSRHLKARRTLGGALEL
EGAEVQVQMDDTKKIEDLTPKAHLEIHDTIAECMIFANHWVARKIADSYPNQALLRHHPL
PREGHFENLIQCAKAKGFEIRTDSNKALAESLDKCVDPEDPMVNKLLRSLATQAMSNAMY
FSTGAISRDQFFHYGLALDRYTHFTSPIRRYADVIVHRQLLSAIGQMESHDLLSNNNLSD
LCQHINNKHRSAQNAQRDSQELFQALFFRDKHPDDECCKVDAVIFQLRANGFLVFIPRYG
IKGPVYLRSKEGQVVYISETEQPEWTSGTVQRSWTSVTVDSVLGSHTYNLFDHVTVKLSL
QLSHAHPSSLRLDLVSNERHQSWVDIALETTEKTDIVKEVHTAAEEKPEKVVNFDLGSDF
NRLQEMYGQTAEKDSLYSLFQSFREMALV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcgtgagagacagttgagagtgaggaattcccaggggcactctataagggtg
gtgagagagctgtacctgagagaagacatcccttgtcacagtccactctgtctggcaggc
tgcgaaactccacttaaccagggtacacatacaggtttggccaaggaagtgacccattac
ctgattcccgatgctcaggtgactacagattacctggagattttggaagtgacagagttg
acaggaattgtatttacacagtcagtgacagattatgtgcaacatgaaggaggaagaagg
cttcacaacagattaaagtctcttattaagaatgggcggaaaggctctgttctgtttaac
aatgaattccagaaattttcttactgtgaacgtcaggctggagaggcgcttcaagactgg
ctgaccagaagcacttatcaatcttctgtttggtactatgatcacctggctgggaaaatt
ccaatcgtcatggttactgaaaatagagagtttctggaggaacatgagaacaaaaagatc
aatgtttttgtgatggacatgaagggttatctggacacattctggtctcatctgtctggc
attgatgacttgtttgaggccctgacagccgctaaagaggagtctgtcagtaaagccgaa
gatgagtacagtggttatctccccttggctgtgctggaggctggcattaaggcaggtcgg
tttgttcagggtaacctccacgtcaacaaacacaatccaatgcaggaggccttcatcaaa
agaacaagtgcacaatcggcaagtgaggcttcacatatggactctgatatattgatacca
ggaatggggacaagaaaccgtgctatccatggagactccgttgtcgtggagttattgccc
cgcccacagtggaaaggaaagtcattagccattaaagagaatgaagaggaacagctgtct
aatgtatcaggtacctctccagaggaagaggaagacatgggagatgtgatgcccacgggg
cgtgttgtgggaatcctacagaggaactggagggattatgtagtctccttcagtcaggat
gaggctggacagaaaaatcccggccgtgcaggtaaagtgttggtgatcccgtgggactat
aggataccgaagatccgaatcagcactagacaggtggataccctgagggaatgcaggatt
attgtgaggatagactcctggcctgcagactccgcctaccctaacggccacctggtgaag
agtttaggaactatcggtgacattgagacagaggtcgccgctcttctggtggagaacacc
ataacagtggcgccattctctgatggtcagctgaaggagctccctgtgaacagtgaggat
gacccctgggtcatggagcccattgaggtgtctcgtcgcaaagatttgagaacatctcac
ctcatttttagtattgaccccaagggctgtgaagatgtggatgacaccctttctgtcaga
aaacttcctaatgggcatttagaactaggtgttcacattgcagacgtaacctattttgtt
ccatcagggtcactgactgaccttgaagcgcagtcaagatcaaccactgtgtacctggca
gatcgccgttacgacatgttacctggagtcctaagctctgacctctgttctctcatcagt
aatgtggacaggtttgcagtgagtgtgatatgggagctggaccagcagatggaggtggtg
ggcgtgtggtatggtagaacagtcatccggtcacagtataagctcttctatgagattgca
caagcgatgcatgatgggatgtcagatgaagaattagttgcaaacattcctgagttacaa
aagttgcatggtgataccctgaacaaaagccttgcagagctaaaagaggccgtgaacatg
ttaatgcacgtgtcacgtcatctgaaggcacgccggactctgggtggggcactggaactg
gagggggcagaggtccaggtacagatggatgacaccaagaaaatagaggacctcaccccc
aaagctcacctggagattcatgacacaattgcagagtgtatgatatttgccaatcactgg
gttgcccggaaaatagctgacagttatcccaatcaggctctgctccgtcaccatcccctg
ccccgagaaggccactttgagaacctgatccagtgtgccaaggctaaggggtttgagatc
cgcacagactctaataaggcccttgcagagtccctggataaatgtgtggaccctgaggac
cccatggttaacaagttgttgaggtctttagccactcaggccatgtccaacgccatgtat
ttttctactggagcgatatcacgagaccagtttttccactatggcctggcgctggacaga
tacactcatttcacatcccccatcaggcgctatgcagatgttattgtacacaggcagctg
ctctctgccattggtcagatggagtcacatgatcttttgagcaacaacaacctaagtgat
ctgtgccagcacatcaacaacaaacacagatcagctcagaatgcacaacgagactcccag
gaactgttccaagcattgtttttccgtgacaaacacccggatgatgaatgttgtaaagtt
gatgctgtcatcttccagcttcgggccaatggctttcttgtatttattccaaggtatggt
atcaaaggcccagtatacctgcgcagtaaggagggtcaagtggtgtacatcagcgaaaca
gagcagccggagtggacgagtgggacagttcagcggtcatggaccagcgtcacagtggac
agtgtacttggcagtcacacctacaatctgtttgatcacgtcactgtaaaactgagcctg
cagctgtcacatgctcacccttcgtctctgagactggatttggtttctaatgagcgtcat
caatcctgggtggatatagccctggagacaactgagaagacagatattgttaaggaagtt
catacagcagcagaagaaaagccagagaaagtcgtgaactttgatctcggcagtgatttc
aaccggttacaggaaatgtatggccagaccgcagagaaggacagcctgtattctttgttt
caatcgttcagagaaatggctcttgtttaa
DBGET
integrated database retrieval system
