Liolophura japonica (common chiton): 135472188
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Entry
135472188 CDS
T09976
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135472188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135472188
03036 Chromosome and associated proteins [BR:
ljp03036
]
135472188
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135472188
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135472188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
135472188
NCBI-ProteinID:
XP_064607636
LinkDB
All DBs
Position
8:complement(55315779..55349906)
Genome browser
AA seq
1849 aa
AA seq
DB search
MSIFGAKTGFGSSFGTQNSTFGTSTPFGQASNTFGTKPAGTTGFGTPSAFGAQTPATGGL
FGAGTNTNTGGLFGQTSTSTFGQPATGGFTGFGVAPSTSSNLFGQTTQANSLFSTPASNS
AFGTKTPGGFGAFGNTTASTNLFGNQQNAGGSLFGASSGGLFGSSAATTNGTTVKFNAPQ
GSDTMVKNGVSQNISTRHQCITAMKEYESKSLEELRLEDYSSNRKGKQQSSLFGASGPTT
QTTAFGFGAQNTTTGFGNTGGFGTQTSSAAGSLFGNTQTQSSTGGLFGTQNKSLFGSNSA
GFGLGQNQNTTNVFGQNQQQNKSLFGTNTTTQATGGLFGNTNTSTFGTAGFSGFGNTNQS
TGSLFNKPVFGSTTTTAPSAFNFGQTSGSLFAKPATTNAFTFGAPNTATTGFGGQANTGL
FGNKATTGFGTAATGLTGSTFGTGFNAANNSLFGANQNKPAFNFGGTNNTFGTSSLSLGG
GLTGNTNTTFSFGNSTSNIGTTGTDSTTAQTAQLQQQLLALTNSPYGDSPLFWNLRQGGA
KREDILKPTNPAAQKAVLNSSNQYKVSPRPSAKIKPKSLHSLMNGSKAQIFDGLEEDDFS
FGNDSLVQRKSVKKLVIKNHGTGSVSSGNQLSHNEDFSESQRFSDSQRFSEPQRFSEEPH
RISSNGYDSPQVSVHMATVNTGIDIRNHSVSETPAMSAPQKRLEFNETITVPPTPELDNS
GDRSEVQLEDSQHEDLQQDEIIELPPHPAGIVLRRPGYYCVPTLEELAVLYEKTGECVVE
NFTIGREGFGSIFFPGMTDVTGLNLDEIVHFRRKEVIVYPDDEKKPPLGEGLNKRAEVTL
DCVWPVDKTSKSPIKSPDSLRMMNYQAKIELATAKLGAKFVDYRPETGSWVFEVKHFSKY
GLLDDSDEEELSEQEKKKLKLLQQQTLAVQKQKMKLLPVIGKDGMEGEKVRGAETRSDLP
AEGVRGESLPQQDVPMMDEEDFVPAVISQGKYSDGYISSEPEEMAGLEEPSSHRLATSMG
VNTRRMQIMKASFFSADVPDEQDPELAHTVMSETRSASPLLKKTEPLVRHTSLFGSALKS
KFPAPVRREPQSLMADHHREAENIFPPRIPSAEVLKPVQAFFPAPPEHMPIPSGMTQERP
RLIVGSRIQRALPDIKESFMYGKQQILHDAGCYMGRSFRVGWGPGWTLVHSGQPSETTEV
TKAKPISILHGQSGSSTPKVGESPWKVNIETIKVAGYFNSQDELLLNNHRHNLEVQLEHA
VSTEEDGSPIFHLGPGTDALHQYAQRTTKDLEKSESHPELPTMLHMEMVYNLCVALWGNL
RGYDTQAMLEVDTNSYRYHQARREAVSSWLSDVCGKTVKEEADQTRFKSDRYLTVILRML
SARKIQEACSLAQKSGDHRLALLLAQAVGSHVPRHMIAQQLINWCELKADHYVDTERLKI
YLLLSGQLLWLASDRMINTCDGMDWKRALAFHLWFKCPPSGLLTEAIHLYDQSYQGTDTC
DKYATSPCPPYLESDPLAAEEETLEGGQFLIQDTCYHLLKLYADRSHRLEILLCPTTHTP
NQMDYRLSWHLCQVLQSLGFLHLSDYHLSVIHTSYAAQLEALGLWEWAAFVLLHISDSQR
RRKAVIDLLSRNADLLKDGVSLEREKLLVERFHVPKVWIHQAKALRARYIGEPYDEAWHL
MKARHWDESHKVLLQHIAADAIINENYDYLKRYLVELVPERGGLIENWHTGGSVFLDYIN
LCQQLDTLRQGEPSLFELEKLQPEVISLCNRVGSLKCVTAKDRLCQCEMAKKAANLLRTL
ISLQHATTPDHVPVRLLAPHISHLPMPEDYSLQELRQLTRGYLLKMNTA
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatttggagcaaagactgggtttggcagctcatttggcactcaaaattcaaca
ttcggaactagtactccttttgggcaggcttcaaacactttcggtacaaaacctgcaggt
acaacaggctttggcacaccatcagcgtttggtgctcagacaccggctactggagggctg
tttggagcgggaaccaacacaaatactgggggcttgttcggacaaacctcaacgtcaacg
tttggacaaccggctacaggaggtttcacagggttcggagtcgcacccagtacttccagt
aacttgtttgggcagactactcaggcaaacagcctgttctcaacgccagcctcaaacagt
gcctttgggactaagacaccagggggctttggggcctttggcaatacaacagccagtaca
aacctgtttggaaatcagcaaaatgctgggggatctctgtttggtgcttcatctggtggg
ctgtttggaagcagtgccgctaccactaatggaaccaccgtaaagttcaacgctccccag
ggatccgacaccatggtgaagaacggtgtgtctcagaacatcagcactcgtcatcagtgc
atcacggccatgaaggagtacgagtccaaaagcctggaggagctgagactggaagactac
agcagcaaccgtaaagggaaacagcagagcagtctgtttggtgcctcaggtccaaccaca
caaaccacagcctttggcttcggggcccaaaacaccacaacaggctttggaaacactggg
ggatttggcacccagacgtcgtcggctgctgggagtctatttgggaatacccagacccag
agctcaacagggggcttgtttggaacccagaacaagtcactgtttggtagtaacagtgcg
ggcttcggccttggacagaatcaaaacacgacgaatgtgtttggtcagaatcagcaacag
aataaaagtttatttggaacaaataccacaacacaggccactggaggcttatttggtaac
acaaacacatccacgtttggaaccgcagggtttagtggctttggaaacacaaaccagtcg
actggaagcctcttcaacaagcctgtgtttggaagcacaaccaccactgcaccatcagcc
tttaactttggccagacgtctggaagtctctttgcgaaacctgccactacaaatgcgttc
acctttggggcccctaatactgcaacaacaggatttggaggtcaggccaacacaggcctg
tttgggaacaaagcaacaactgggtttgggaccgctgccactggtctcactggctccaca
tttggcacagggtttaatgcagcaaacaactcactgtttggtgcaaaccagaacaagcca
gcatttaattttggtgggacaaataatacatttggaacaagttcattatctctggggggc
ggactcaccggaaacacgaacaccacgttcagttttgggaactccacaagcaacattgga
acgactggaacagactcgaccacagctcagactgcacagttacaacaacaactcctggct
ctcactaactcaccgtacggggattccccactcttctggaacctaagacagggtggagct
aagcgtgaagatatactgaagcctacaaaccctgctgctcagaaggctgtgctgaactcg
tctaaccagtacaaggtcagccctcggccatctgctaagatcaagccaaagtctttgcac
tccctgatgaacggtagcaaggctcagatctttgatggattggaggaggatgacttcagt
tttgggaacgactcgctggtacagaggaagagtgtgaagaaactggttataaagaaccac
ggcactggctctgtgtcctccggtaatcagctgtcccacaatgaagacttctctgaatcc
cagcgattctcggactctcagcgcttctctgagcctcaacgatttagcgaggaaccacac
cgcatcagcagcaacggatatgattccccccaagtgagtgtgcacatggccactgtgaac
actggcattgatatcagaaatcactcggtgtctgaaacgcccgctatgagcgccccacaa
aaacggttggagtttaatgagacgataactgtgcctcccactccagagctagacaacagt
ggggataggagcgaggttcagctggaggatagccagcatgaagacctgcaacaggatgag
atcattgagctaccccctcacccagctggcatcgtgctgcgaagaccagggtattactgt
gtccctaccctagaagagctggcggttctgtatgagaaaactggggagtgtgttgtagag
aactttaccattggccgtgagggatttggcagcatcttcttcccagggatgaccgatgtc
acagggcttaacctggatgaaatagttcactttcgtcgtaaggaggtcattgtgtaccct
gatgacgagaaaaagcctccgttgggggagggactaaacaagagggcagaggttacactc
gattgtgtctggccagttgataagacgtccaaaagtcctattaagagcccagacagcctg
cgaatgatgaattaccaggctaagatagagctcgccacagccaaattaggggccaagttt
gtggactacaggcctgagactggttcctgggtgtttgaggttaaacatttctctaaatac
ggcctgttggatgactcagacgaggaagaattgagcgaacaggagaagaaaaaactgaaa
ttgttacagcagcagacattagcagtacagaaacagaagatgaagctgttacctgtgata
ggtaaagatggtatggagggggaaaaggtgagaggggcagagacccgctctgacctcccg
gctgagggtgtcaggggtgagagcctgccccaacaagatgtacccatgatggatgaggag
gactttgtacccgctgtcatctctcagggaaagtacagcgatggctacatctcatcagaa
cctgaggagatggcggggttagaggagccctcttctcacagactggccacaagcatgggg
gtcaacactcgaaggatgcagatcatgaaggcctcattcttctcagctgatgtcccggat
gaacaagaccctgagctggcacacacagtcatgtctgagaccaggtcagcctctccctta
ctgaagaagacagagccacttgtcagacacaccagtctgtttggatccgccctcaagtcc
aagttccctgcccctgtcagacgagaaccacagagtctgatggcggatcatcacagggag
gctgaaaatatcttccctcctcgtattccctcggcagaggtactaaagcctgttcaggcg
ttcttccctgccccaccagagcatatgcccatccctagcgggatgacccaggagcgtcct
cgcctcatcgtgggatcccgcatacagcgcgctctgcctgacattaaggagtcattcatg
tatggcaagcagcaaatccttcacgatgcaggctgttacatgggtcggtcattccgtgtg
ggctgggggccaggctggacactggtacacagtggtcaaccttctgagactacagaagtt
actaaggccaaacctatatcgatactgcatggtcagtctggcagctccacacctaaagta
ggagaatccccatggaaggtcaacatcgagaccatcaaggttgctggctatttcaattca
caggacgagcttttgctgaacaaccatcgtcataacctggaagtacagctagagcatgct
gtcagcacagaggaagatggttcccctatatttcacctgggccctgggacagatgccctt
catcagtatgctcagcgaaccacgaaggatctggagaaatcagagtctcaccccgagctg
cccacaatgctgcacatggagatggtgtataacctgtgtgtggccctgtgggggaacctt
cggggctacgacacccaggctatgctcgaggtggacacgaacagttaccggtaccaccag
gccagacgggaagctgtgtcctcgtggttatctgacgtgtgtggaaagactgtgaaagag
gaggctgatcagacccgctttaagtctgataggtacttgacagttatcctgcgcatgctg
agtgccaggaagatccaggaggcctgctcattggctcagaagtcaggtgaccatagactg
gctctcctattggctcaggctgttggtagtcatgttcctcgtcacatgattgcacagcag
cttatcaactggtgtgaactgaaggcggaccactatgtggacacggagcggctgaagatc
tacctgttgttgtctggtcagctgctgtggctggcctcagacaggatgattaacacctgt
gacgggatggactggaagagagctcttgcctttcacctgtggtttaagtgtcccccctcg
gggctcctgacagaggcaatacatctgtatgatcagtcctaccagggcactgacacttgt
gataagtacgccacatcgccctgccccccgtacctggagagtgatcccctggcagcggag
gaggaaacgttggaggggggtcagtttctaatccaggacacctgctatcacctgttaaaa
ctgtatgctgaccgctcccaccgtctggagatacttctctgtcccaccacacacaccccc
aaccagatggactacagacttagttggcacttgtgtcaggtgttacagtctctgggcttc
cttcacctctctgactaccacttgtccgtgatccacaccagctatgcggctcagctcgag
gccttgggactttgggagtgggctgcctttgtcctcctacacatatctgatagtcaaagg
cggaggaaggctgtgattgaccttctgagcaggaacgcagatttgctgaaggacggagtg
agtctggagagggagaaactactggtggagagatttcatgtgccaaaggtgtggatacat
caggcaaaggccctacgagcccggtacataggggagccgtacgacgaggcctggcatctg
atgaaggccagacactgggatgagagccacaaagtcctgctccagcacatagctgccgac
gctatcatcaatgagaactatgactacctgaagcgttacctcgtggagctggtacctgag
agaggagggctgatagagaactggcacacagggggcagtgtcttccttgactacattaac
ctctgtcagcagctcgacactctcagacagggtgagccaagtctgttcgagctagagaag
ttgcagcctgaggttatctccctttgtaatcgtgtaggcagtctcaagtgtgtcacggct
aaagacagattgtgtcagtgtgagatggcaaagaaagctgctaatctgctgagaactctg
atcagtcttcagcatgctacgactccagaccatgtacctgtcaggttactggctccccat
atcagtcacctgccgatgccggaggactacagcctgcaggaattgagacagctgacccgt
ggttaccttctcaagatgaacactgcatag
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integrated database retrieval system
