Liolophura japonica (common chiton): 135472203
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Entry
135472203 CDS
T09976
Name
(RefSeq) coatomer subunit alpha-like
KO
K05236
coatomer subunit alpha
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ljp04131
]
135472203
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ljp04147
]
135472203
Membrane trafficking [BR:
ljp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135472203
Exosome [BR:
ljp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135472203
Exosomal proteins of bladder cancer cells
135472203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
GATase
Motif
Other DBs
NCBI-GeneID:
135472203
NCBI-ProteinID:
XP_064607662
LinkDB
All DBs
Position
1:74698150..74716861
Genome browser
AA seq
1227 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGTIQLWDYRMCTLIDKFDEHDGPVRGICFH
NQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTTFHHEYPWILSASDDQTIRIW
NWQSRTCICVLTGHSHYVMCAQFHPSEDLIVSASLDQTVRVWDISGLRKKNVAPGPSSLE
DRIKNSTQTDLFGSSDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQIKMWRMNESK
AWEVDTCRGHYNNVSCVAFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLG
AHPTLNLFAAGHDNGMMIFKLERERPAYAVHNNTLYYVKERYLRKLDFTTSKDVAVMQLR
GGSRSPVYSMSYNPAENAVLLCTRTSNLENSTYDLYSIPKDSDSQNPDAPEGKRSSGLTA
VWVARNRFAVLDRTHSIVVKGIKNEITKKVQAPNCEDIFYAGTGCLLLKDADGVTLFDVQ
QKRTLASVKISKVKAVIWSNEMSHVALISKHVISICNRKLENLCTIHENIRVKSGAWDES
GVLVYTTSNHIKYALTNGDHGIIRTLDLPIYITRIKGNSVYCLDRECRPRVLGIDPTEFK
FKLALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFALALECGNI
DIALEAARALDDQSCWEKLGEAALLQGNHQIVEMAYQRTKNFDKLSFLYLITGNLEKLRK
MMKISEIRKDVSGHFQNALYLGDASERVKILKNCGQKSLAYLTAATHGLEEEAEQLKEGF
EEGEPIPDLYPNAQLLQPPVPIMQQESNWPLLTVTKGFFEGAMTNKGKGTASAMAAVDTA
DEGAGEGWGEDADLGLDDDGFGMPSEGFDDEALEGGEDGGWDVGDDDLELPPDLDVGPAA
GGGSGDEGYFVPPTKGTSQAQVWCNNSRLPVDHVLAGSFETAMRLLHEQVGVVSFEAYKQ
LFLQTFSRARTSYIGLPSLPPLFGTPHRNWKEAGARAGLPAVGLKLADLVQRLQAAYQLT
TGGKFADAVEKFRTILLAVPLLVVDTKQEIAEAQQLIEICREYIVGLSMEVKRKDMPKSN
LQEQKRLCEMAAYFTHCNLQPVHLILTLRTALNLFFKLKNFKTAASFARRLLELGPKPEV
AQQTRKILAACEKNPVDEHELKYDQHNPFDICAATYVPIYRGKPVVKCPLSGACYLPEFK
GQVCRVTQVTEIGKDCIGLRISQLQFR
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaaatttgaaacaaagtcagccagggtgaaaggtttatcctttcaccctaag
cgaccatgggttcttgctagccttcacaatggtaccattcagctctgggactatcgcatg
tgtacactgattgataaatttgatgagcatgatggcccagttcgaggcatttgttttcat
aaccaacagcccctgtttgtgtctggtggggatgactacaaaataaaggtctggaactac
aaacagagaaggtgtctcttcacccttctgggccatctggattacatcaggacgacaacg
ttccatcatgaatacccctggatcctgagtgcctccgatgaccagactatccgcatatgg
aactggcagtccagaacatgcatatgtgtgctgactggtcacagccattatgtgatgtgt
gctcagttccaccccagtgaagacctcatagtctctgcctccctcgaccagacggtcaga
gtctgggatatttctggattgaggaaaaagaatgtagcaccaggcccatccagcctggag
gacaggattaagaacagtacccagacagacctatttgggtcatctgatgccgtcgtgaag
cacgtgttagagggccatgacaggggagtgaactgggcagcctttcaccccacactgccc
ctcatcgtgtctggagctgatgacagacagattaagatgtggagaatgaatgagtctaag
gcttgggaggtggatacctgccgtggtcactacaacaatgtgtcatgtgtggccttccat
cctagacaggagctgatcctgagtaactctgaggacaagagtatccgtgtctgggacatg
agcaaaagaactggggtgcagacattcagaagagaccatgatagattttgggtactgggg
gctcacccgactctgaatttgtttgctgcagggcatgacaatggaatgatgatatttaaa
ctggagcgtgaacgccctgcctatgctgttcacaacaacactctgtactatgtcaaggag
aggtacctgagaaaactggacttcacaacgtccaaagatgtggctgtcatgcagctcaga
ggtggatcccgtagcccggtgtacagcatgtcctacaacccagctgagaatgctgtacta
ctgtgcactaggaccagtaacctggagaacagcacctatgacctctactccatccctaag
gactcagactcccagaaccccgatgcccctgagggtaagcgctcctctggattgaccgct
gtgtgggtggccaggaataggtttgctgtcctagacaggacacattcaattgtggtgaag
ggtatcaaaaatgagatcacaaagaaggttcaggctcctaactgtgaggacattttctat
gctggcactggttgtctgctcctgaaagacgcagatggtgtgacactgtttgatgtgcaa
cagaagaggacattagccagtgtgaagatctccaaggtgaaagctgtgatttggtccaat
gagatgagccatgttgctctcatcagcaaacatgtgatttctatctgtaatcgtaagctg
gagaacttatgtaccatccacgagaacattcgtgtgaagagcggggcgtgggatgagagt
ggtgttctcgtgtacaccactagtaaccacattaagtacgctctgaccaacggtgaccat
ggcatcatccgtaccctggacttgccaatctacatcacccgtatcaaggggaacagtgtg
tactgcctggacagggagtgtcgcccacgggtactgggcattgacccaacagagttcaag
ttcaaactcgccctggtcaaccgcaagtatgacgaggtgttacacatggtgcgtaatgcc
aagctggtgggtcagtccatcatagcctacctacagaaaaaaggctacccagaggtggct
cttcactttgtcaaggatgagaaaactaggtttgctctggctctggaatgtggtaacatt
gatattgcccttgaggctgcccgagcattggatgaccagtcctgctgggagaagctcggg
gaagctgccctcctacagggcaaccatcagattgtggagatggcctaccagaggaccaag
aactttgacaagctctccttcctctacctcatcactggtaacctggagaagctgaggaaa
atgatgaaaatatctgaaatcaggaaggatgtcagtggtcattttcagaacgctctttac
ctgggagatgccagtgagagagtcaagattctcaaaaactgtggccaaaaatcactggct
tacctgacagctgccacccacggcctggaggaggaggcagagcagctgaaggaggggttt
gaggagggagagccaatacctgacctctaccctaatgctcagctcctccagcctccagtc
cccatcatgcagcaggagtctaattggccactgctcacagtcaccaagggattctttgag
ggagccatgacaaacaaaggtaaaggcacagcatcagccatggcagctgtggacacggca
gatgaaggtgcaggagaaggctggggagaagacgctgaccttggattggatgacgatgga
tttgggatgccctcagaagggtttgatgatgaggcactggagggtggagaggatggaggc
tgggatgttggggatgatgatttggagttaccacctgatctggatgttggtccagcagca
ggaggggggagcggagatgaaggttacttcgtacctcccaccaagggaacctcacaggca
caggtgtggtgtaacaactccaggttacctgtcgatcatgtactggctgggtcttttgaa
acagccatgcgactgttacatgaacaagtcggtgtggtcagttttgaggcttacaaacag
ctgtttctgcaaacctttagccgagccagaacatcatacattggcttgccatcattacct
cccttgtttggaactccacatagaaactggaaagaggcaggtgctagagcaggactacca
gctgtgggcctcaagctggctgacttggtccagaggttacaggcagcttaccagctgacc
acaggagggaagtttgctgatgctgtggagaagtttaggactatcttactggctgtaccg
ttactagtggttgacacgaaacaagaaatagcagaagctcagcaactgattgaaatctgt
agagagtatattgttggtttgagtatggaagtgaaaagaaaggacatgcccaagtccaac
cttcaggaacagaagaggttatgtgagatggcagcctatttcacccattgtaacctacaa
ccagtacatcttatcctcacccttaggacagccctaaatctcttcttcaaattaaagaac
ttcaaaacagctgcaagctttgcacggaggttactggagctggggcctaaaccagaagtt
gctcagcagacaagaaaaatcttagctgcatgtgagaagaacccagtggatgaacatgag
ctcaaatatgaccaacacaacccctttgatatctgtgctgccacttatgtacccatttac
agaggaaagccagtggttaagtgtccgttgagtggagcctgttacttacccgagttcaaa
ggccaggtgtgtcgtgtcacacaggtgacagaaattggcaaggattgtatcggcctgagg
ataagccagctgcagttccgataa
DBGET
integrated database retrieval system
