Liolophura japonica (common chiton): 135472232
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Entry
135472232 CDS
T09976
Name
(RefSeq) structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljp03400
]
135472232
DNA repair and recombination proteins [BR:
ljp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
135472232
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran_CTD
AAA_25
RdRP_helical
Motif
Other DBs
NCBI-GeneID:
135472232
NCBI-ProteinID:
XP_064607700
LinkDB
All DBs
Position
8:complement(41989522..42028837)
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AA seq
1050 aa
AA seq
DB search
MTAAGDNAADYVEGSILRVKLENVLTYDSVEFQCGPYLNVIIGPNGTGKSTIVCAICLGL
GGKTSFLGRAHQPSDYIKYGNDKAKIELELFNPDGENYIIQRQIFKNNTSNWMVNGRGAA
HRTVEETVSRLNIQLGNLCQFLPQEKVADFAKMTQQELLENTEKAVGTPEMYENHQKLKH
TRNDSRNLELGYNNLFQRVEQEVQKNSHLEHEVKNYEERQRHLEKIKLLEMKKPWVEYEE
QRRHYQAEKLKKDAMSEELRKAQREFRPLKQKLEEAESKVKKLHNEMVKLVDKVKGHATQ
AHEKSNQIEAESDKVLEVYEELKFRQQEEVTRKKLLHDLRRQLGALENELASSSHGEDIQ
PAIDKVNQEARAINASLTHNQQAANTIQGEVESGRQEMYGYQRELQQLQNVSNRRLELLR
QCHRHTYEAVIWLRANKHRFKATIHEPMILTVNVKDASDAKYIESHVSFNDIRAFVCEES
EDLNLFMDVMRDEQKLKVNAISMPSQPLSSFKPAFRLEDFRKYGFRCYLKDMIECPEAIM
RYLCLQYHVHSIMIGTEKTKAMVERVIQENPRLTSFYTANNQYAIRRSKYDGELARRNTQ
LKKPSLLTVALDNQRIARLQQSIQDCQTTLQAAEQKYSKLQQDSRELDTRLNQLRNEKKE
LSKQKDRKRTLLSQIETKKQSISRKEKEGLDMEGEKRKAADKIRQITVKKCQHLQVLKDQ
TKHCFELGMARVRLSLAHALAKKETTDIETLISDQSQSLQNLERANIEMKERLRQTKDRA
KQLLDIAKQATGTSNSEELSSELKQAFEALPRTVDEIDSCIHEQRVRADCKFQTDERIVK
EFNTRKRDIAQMQRELANKKDALERHQTVMEKAKQEWLTPLKSLVNRISQNFSLFFQSLH
CSGEVDLSVPENPEDYEKYGIRIKVKYRDTEPLRELTPFHQSGGERSVATVLYMMALQEL
TNCPFRCVDEINQGMDPINERKVFELVVHTVCKRSSSQYFLLTPKLLPDLEYSDNMRVLC
VYNGPLMMNHTEWRLKKFIHRRQRLTEEVG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagccggtgataatgcagccgattatgtcgaaggatccatactaagagtcaaa
ctggaaaatgtattgacttatgactcggtggaatttcagtgtggaccttatctaaatgtt
atcattgggccaaatggcacaggaaagtcaaccattgtctgcgcaatctgtcttggactt
ggcggaaaaacaagtttcctcggtcgtgctcaccagccttcagactatattaaatatggc
aacgacaaggcaaaaattgaacttgagctatttaatccagatggggaaaattatatcatc
cagcgacagatattcaagaataacacatcaaattggatggtgaatggcaggggagccgca
catagaacagttgaagagactgtttcaagactgaacattcagctgggaaatttgtgtcaa
tttttacctcaagaaaaggtggcggattttgccaagatgacccagcaagaactgcttgaa
aacacagagaaagcagtaggcacgccagagatgtatgaaaatcaccaaaagctgaaacat
actcggaatgattcgcggaacttggagctgggatacaacaacctttttcagcgagtggaa
caggaggtccaaaagaactcacacctggagcacgaggtcaaaaattacgaagaacgacag
cgccaccttgagaaaatcaagttacttgagatgaaaaagccttgggtggaatacgaggag
caaagaaggcattatcaggctgagaagctcaagaaagacgcaatgtcagaagagttacgg
aaagctcaaagagagttcagacccttaaagcagaaactggaagaggcagagagtaaagtg
aaaaaactccacaatgaaatggtgaagctggtggacaaagttaagggacatgctacccag
gctcatgagaagagtaaccagattgaagcggagtcagacaaggtgctggaagtgtatgag
gagttgaagttcagacagcaagaggaggtaacaaggaagaaattactgcatgacctcaga
cgacagcttggagcattagaaaatgaactggcatcttcatctcatggagaagatatacag
cccgccattgacaaagtcaatcaagaagccagagcaatcaatgcaagtcttactcataac
cagcaggcggcaaatactattcaaggagaggtagagagtggtcgtcaggaaatgtatggt
tatcagagggaacttcagcagctacaaaatgtcagcaatcggcgtctggaactccttcgt
cagtgccaccgtcacacctatgaggctgtcatctggctgagggctaataagcaccgcttt
aaggccactatccatgagccaatgatacttacggtaaatgtcaaagatgccagcgatgcc
aagtacattgagtctcatgtgtcctttaacgatatccgggcgtttgtttgcgaggagtca
gaggatttgaacctgttcatggatgtgatgagggatgaacagaaactgaaagtaaacgca
atcagtatgccgtcacagcctctttcttcattcaagcctgccttcaggctggaggacttc
aggaagtacggtttccgttgctacctgaaggacatgattgaatgcccagaggccatcatg
aggtacctgtgtcttcagtaccatgtccactccatcatgattggtacagagaagaccaag
gctatggtggagagagttatccaggaaaacccacgcctcacctccttctacactgccaat
aatcagtatgcaatccgacgctcaaagtatgatggggaacttgcgaggaggaatacacag
ctcaaaaagccgtccctgctaacagtagctttggacaaccagaggatagccagattacag
caaagcatacaggactgtcaaacaactctgcaagctgcagaacagaaatacagcaaactc
cagcaggattcaagagagctggacactaggctgaaccaactgagaaatgagaagaaagag
ctgagtaaacagaaagacagaaaaaggacattattatcacagattgaaaccaaaaaacag
agcatctcacggaaggaaaaggaggggctggacatggaaggcgagaaacggaaagcagca
gataaaatacggcagattactgttaagaaatgtcagcatcttcaggtcttaaaagatcaa
acaaagcactgttttgagctggggatggccagggttcgcctcagcctggcacacgccctc
gccaagaaggagacaactgatatagagaccttaatatctgaccagtcccaaagcctgcaa
aatctagagagagctaatatagagatgaaggagcggttacgtcagaccaaagatcgtgcc
aaacagttgttagacatagctaaacaggcaacaggtacaagcaattccgaagaactctct
agtgaactcaaacaggccttcgaggcattaccaaggacagtggacgagattgactcgtgt
attcatgaacagagagtgcgagcagattgcaaattccagacagatgaacgaattgttaaa
gagttcaacacaagaaagagagatatagcacagatgcagagagagttggccaataagaaa
gacgccctggaaagacaccagacagtgatggagaaggccaaacaagagtggctcactcca
ctgaagagcctagtcaacagaatcagtcaaaactttagtctgtttttccagagcctgcac
tgttcaggggaggtagatctcagtgtaccagagaatccagaagactatgagaagtatggc
attcggatcaaggtgaagtaccgggacacagagcctctaagggagttaactccatttcac
cagagtggtggtgagaggagtgttgccacagtgctgtacatgatggctctacaggagtta
accaattgtcccttcaggtgtgtcgacgagatcaaccagggaatggatccaatcaatgag
agaaaggtgtttgagttagttgtgcatacagtctgtaagaggagttcctctcaatacttc
cttctcacaccaaagttgttgccagacctggaatactcagataacatgagagtcctgtgt
gtgtataatgggcctctgatgatgaaccacacagaatggagattgaaaaagttcatccac
cgccggcagagacttacagaggaagtaggctga
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