Liolophura japonica (common chiton): 135472409
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Entry
135472409 CDS
T09976
Name
(RefSeq) endoribonuclease rege-1-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135472409
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
135472409
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
KH_N4BP1_1st
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
135472409
NCBI-ProteinID:
XP_064607974
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All DBs
Position
1:52409133..52427024
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AA seq
961 aa
AA seq
DB search
MEDEFIISRSKLPLFQQYQSHISSLFAVCLQISTPGTFIPANYGSLIWIKVKSGSPELSL
QQQQQDVKSAKEYILSLTGDNEDCCTESLRLSPERFDWLQRHVTEIEINSRAVISLHNDD
SSVQIHGHPENRALAHSCIDFLLQGNASRESTSLIPDAQMPAGFKSRGEMGGHRTKLPLP
QPCLSPGADSCYGSSDDCLACPPPPPPRTDKPCVREPQIPSTPGSTSPSAHSDSPPSSDP
ELDTIKSDSYLSKLQFGIRLGFSEAQVSSVLQKRGIDVPQNELLSELVSLGSGSHMPPTT
SRVSGNLDSGDMDSGWLSGSGAGVESSGVTGESGSKTELSLPLTTDNDLSSHNTDTSYRP
IVIDGSNVAMSHGNKAVFSCRGIQLAVDWFKKKGCKDITVFVPQWRKESPRQDAPIDDQH
ILTELEQEQILSFTPARRIGGKRMVCYDDRYVLKLAAEIGGIVVSNDNYRDLLEENKEFK
RVVEERLLMYSFVRDMFMPPDDPLGRHGPSLENFLRKEPTEPEPKPPPCPYGKKCTYGNK
CKYYHAERGNLPQKTITEKLAEQAKQNLLEVTERSKTDKKKTGKKQKQPEKKVLTRTHSC
TTALLSEDLVPPPRPPRKPISSPNPRLSPFSDILDTQAVENPEFKAYNDKLSELSKNIPV
DNYGQRTSKDALDVPPGYCETGLWAPPELGKARASPQLVTGHLELAQTLSDEANREQRQK
SLLQQQEELKQDLKRGLQPLVYEPSGEDHLQRITQQQLHIQEIPHPRGTSPNHGWPKEDN
QQYSQPRYASDLSTSYATSSMNCQNSTSDPMLDKPDVMSSRTQYGHLVNPMFTHRQPSYP
QSYHSHQPYNAPSGQYPLGSSSNFVPHGYFQMPGPQLGMMRTEVGSMGTGNWPHQTVPPS
SLLSEGSFPADTPILPTDQRYNLYYHLCGLFKEPDVRAIMNRLPNETNPQVLCAHLLSLN
H
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaatttatcatttctcgctcaaaattgcctctgttccagcaataccagtct
catatttcctcacttttcgctgtgtgtttacagattagtactccaggaacgtttattcca
gcgaattacggctccctgatctggattaaagtgaaatccgggtcacccgaactgtcacta
caacaacaacaacaggatgtaaaaagtgcgaaggagtacatcttatccctgactggagat
aacgaggattgctgcacagaaagtctacgcttgagtccagagaggtttgattggcttcaa
aggcatgtcacagagatagagataaattccagggcagtcatcagtctgcataatgatgat
tcctccgtgcagattcatggacatcctgaaaacagagccttggcacactcctgtatagac
tttctcctccagggaaatgcttccagggaaagtacttccctaatccctgatgctcagatg
ccagcaggttttaaaagtcgtggggaaatgggtggacacagaactaaactgcccctcccc
caaccatgtttgagccctggggcagactcttgttatggttctagtgatgactgtttggcc
tgcccaccacccccacctcctagaacagataagccttgtgtgagagaaccacagatcccc
tccacacctggtagtacctcaccctcagctcactcagacagtccaccgtcctctgatcct
gagctggataccatcaagtctgacagctacctttctaagctacagtttggcataagactt
ggcttctcagaagctcaagtgtcgagtgttttacagaagcgaggaatagatgtaccacag
aatgagttgctgtcagaactggtaagcctggggtcgggttctcacatgcccccgacaacc
agtagggtgagcgggaatctggacagcggtgacatggacagtggctggttgtctggcagt
ggagctggtgttgagagcagtggagtaacaggagaatcaggaagcaaaacagagttgtct
ctccccctaactacagacaatgacctgtcctctcacaacacagacacaagctacagaccc
atcgttattgacggtagtaatgtggccatgagtcatggcaacaaggcagtattttcctgt
cgaggaatccagctagcagtggactggtttaagaagaaagggtgtaaagatatcacagtc
tttgtgcctcagtggaggaaggagagccccaggcaagatgcaccaattgacgatcagcat
attctgacagaactagagcaggagcagatattgtcatttaccccagccaggaggatagga
gggaagcgtatggtgtgctatgatgaccgctatgtccttaagctggcggcagaaattggg
ggcattgtcgtgtccaatgacaattaccgtgacttgctagaagagaacaaggaatttaaa
agagtagtggaagagcgacttctcatgtattcatttgtgcgtgacatgttcatgccccct
gatgaccccttaggcagacatggccccagcctggagaatttcctccgtaaagaacccaca
gagccagaacccaaaccaccaccctgtccatatgggaagaagtgtacgtacgggaacaag
tgcaagtattaccacgcagagaggggcaacctgcctcaaaaaaccatcacagagaagctt
gctgagcaagctaagcagaacctgctggaggtgacagagagaagtaagacagacaagaag
aaaactggtaaaaagcagaaacagcctgagaaaaaggtattgactcgaacccactcttgt
acaacagcactattgagcgaggacttggtcccaccaccccgaccccccagaaagcctata
tcctcccccaaccctcggctctcaccctttagtgacatcctggatacccaggcagtggaa
aaccctgagtttaaggcctacaatgacaagctgtcagaactgagcaaaaacattccggtg
gataactatggacagaggacaagtaaagatgctctggatgtgcccccaggttattgtgaa
actggcctgtgggccccaccagagctgggtaaagcccgtgctagtccacagttggtgact
ggtcacttagagctggcccagaccctctctgatgaggccaaccgagagcagagacagaag
agcctgctacagcaacaggaagagctgaagcaagacctcaagcgaggccttcagccgctg
gtttatgagccatcaggggaggatcatcttcagaggatcacacagcagcagttacacata
caagagatcccacatccccgagggacctccccaaaccatggctggcccaaggaggacaat
caacagtacagtcagccaagatacgcgtcagacttgtctactagttatgccacatccagt
atgaactgtcagaacagtacctctgatccaatgttagataagccagatgtcatgtcttct
agaactcagtatggacatttggtcaatcccatgttcacccacaggcagccatcctaccct
cagtcttaccactctcatcaaccgtataatgcccccagcggacagtaccccttgggtagc
tcgtcaaacttcgttccacatggatatttccagatgcctggtccacaactcggcatgatg
aggacagaagtagggagtatggggacaggaaattggcctcatcaaactgttccaccttca
tcactgctctcagagggaagttttccagcagacacgccaattttgcccacagaccaacgg
tacaatttatattaccacttatgtggtctctttaaggaacctgatgtacgtgcgattatg
aacagactccctaatgaaactaaccctcaagtcctctgtgcccaccttttgagtttaaac
cactga
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