Liolophura japonica (common chiton): 135472580
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Entry
135472580 CDS
T09976
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135472580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135472580
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135472580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Nucleoporin_FG
SHE3
Sharpin_PH
NTR
DUF1779
Motif
Other DBs
NCBI-GeneID:
135472580
NCBI-ProteinID:
XP_064608210
LinkDB
All DBs
Position
8:24177917..24196937
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AA seq
534 aa
AA seq
DB search
MAFSFGQTTQNQATPSLFGTGSTAAPTSLFGTVAKTTAAPTFGFGTATNTASTGTGLFGT
TTATTQPSTSFGGFNFGGTPSSTATTTTASTGFSGFGGFGTTTSALGGTSGFGTGTTFGT
GTTGTGLFGQQQQQQQQQQQQQQQPGNELANIVTSVTMPQVFNDERDLVLSNWNQMQAYW
GTGKGYFSANGVVEFKPDNPFCRFKAIGYSQLPKAKNEDGVVSLIISQKEKDVKDVQQQF
VDALHKILGSKPTLSICVQGVRPLPDDKTEMIMYILERPAVGPSKRLSASEVSNFMNTAN
IKTQLTNQLKIESVLPKIGLTPEQIKHYLDHPPAGIDPLLWNQAKLENPDPETLIPVPMI
GFKELHQRLKHQDQQTKLHINRLDVIAADLTELQRSRSNMLAKLEECKRKQLELGHRVLQ
VVGKQEINRKLGYGIQAEEEQLRVQLEAIQADLNHPTQFKGRLNELMSQIRMRNQLGISK
SDVSYQMDSSLQDEIRQLLAHQQEGLQHLMHIIKEDVENLNLIEQGLADSSHLR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctttctcgtttggccagacgactcaaaaccaggcaaccccgtcattattcggcacg
ggttcaacagcagcccctacttcgttatttggaacggtggccaagacgacagctgcccca
acatttggatttggtactgccactaacactgcatccacgggaacagggttatttgggacc
actacagccacaacacagccctcaaccagctttggcggattcaattttggtggaacacct
tcttctactgcaactacaacaacagcctctacaggattcagtggttttggcgggtttgga
acaaccacaagtgctctgggtggaacatctgggtttggcactggcactacttttggaact
ggaacaacaggcactgggctttttggccaacaacaacaacagcagcagcagcaacaacaa
caacagcagcagcctgggaatgagctggctaacatcgtcacatctgtgacaatgcctcaa
gtgttcaatgatgagcgagacttggtgctgtctaactggaaccagatgcaggcttactgg
ggcacgggaaaaggctacttcagtgctaatggcgtggtggaattcaaacctgataacccc
ttctgcaggtttaaggccattggttatagccagttgcccaaggccaagaatgaagacgga
gttgtgtcccttattatcagtcagaaagagaaagatgtgaaagatgtccagcagcagttt
gtggatgctcttcacaaaattctcggcagtaaaccaacgttgtccatttgtgtacaggga
gtgcgacctctgccagatgacaaaactgagatgatcatgtacatactggagcgtccagct
gttggtccgtccaaacgactctctgcttctgaggtctcaaacttcatgaacacagcgaat
atcaaaacccagttgaccaatcagctgaagatagaaagtgtcttaccaaagattggtttg
acacctgaacagattaagcattatttggatcatcctcctgcaggtatagaccctttattg
tggaatcaagccaaactagagaacccggacccagaaactcttatcccggtacccatgata
ggattcaaggagctgcaccagcggttaaaacatcaagaccagcagaccaagctgcatatc
aacaggctcgatgtgatagctgcagacctaactgagctacagcggtcacggagcaacatg
ctggccaaactagaagagtgcaagaggaaacagctagaattagggcatagggtattgcag
gttgttgggaagcaagagattaaccgtaagctgggctatggcatccaggccgaggaggag
caattgagggtacagttagaggccatacaggcagaccttaatcaccccacacagttcaag
ggtcgactgaatgaactgatgtcacagattcggatgaggaatcagctgggtatttcgaag
tcagatgtcagttaccaaatggacagcagtttgcaggatgagattagacagttattggcg
catcaacaggaggggttacaacatttaatgcacatcatcaaagaagatgtggagaattta
aaccttatagagcagggtttagcggacagtagtcatttgagatag
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