Liolophura japonica (common chiton): 135473094
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Entry
135473094 CDS
T09976
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135473094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135473094
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135473094
mRNA degradation factors
3'-5' decay
Pan complex
135473094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
zf_CCCH_4
zf-CCCH
zf-CCCH_4
zf-CCCH_9
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
135473094
NCBI-ProteinID:
XP_064608975
LinkDB
All DBs
Position
8:45211675..45227288
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AA seq
734 aa
AA seq
DB search
MTSAAPAGRKPALCRFFVNTRSCVYGEECQFLHQNPDMMSGVHPPAAYPSSLPAQPESVD
SHGDTIANNGDQFFNATFNSGGQMPEFQQFIQRPRPRTRNNPLTSMARGMKPFVPQMNRG
EPGFADSFAALNLANSSNKSSVNPGANEFVPKAASISHSSSSPSFSSFNNITPMPTSTHS
NHVINSSSTLSTGVSPTPSPGMSPADSPLMMRRNASPVTPLQGPNNNAGTIQENVGGTTY
FYSAEDFAPQYQGMALPNFTMFPALPPHIAHMKVKANMPQFFMPDEIKMDLLNRHALTLA
QLDPEQNPDIPPEVDNYHNLFPLEPPQGNNLQKSTTFGYPTTCYKAVNTKDGMTYCLKRI
HGFRLVNTKCMAVIDMWKKLYHPNIVQLREVFTTKAFGDHSMVFVYDYHPAAETLMARHF
NNPTHLNGFTSPYNLDGSARPYSAGKGANGPRQHAGLLPESLIWAYVVQLSSALRAIHAA
GLACRAMDPTKILICSKSRLRINCMGIFDVLTFDSSQNNPVAMMPHYQQDDLVSLGKVVL
ALACNSVLGIQREHIQTSMELVARNYSADLKNLILYLLTNQTRPRSINDIMPMIGARFYT
QLDAAQLRNDVIENELAKEVENGRLMRLLCKLGTVNERPEFNMDTTWSETGDRYMLKLFR
DYLFHQVDENGAPWVDMAHIVQCLNKLDAGVPEKVCLMSRDEQNIITVSYTELKRCFQSA
FSELLSASHQSGFS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgcggcacctgctggtagaaaacccgcactgtgccgcttttttgttaacacc
cgctcgtgtgtgtacggggaagagtgtcagtttcttcatcagaaccccgacatgatgagt
ggagtccatccgccagctgcttatccaagttctttacctgctcaaccagaatctgtagac
agtcatggtgacacaatcgcaaataatggagaccaatttttcaatgcaaccttcaattct
ggtggacaaatgccggagtttcaacagttcattcagagaccaaggcctaggacacgtaac
aatcccctgacatcaatggcaagaggcatgaagccttttgtgcctcagatgaacagaggg
gaacctggatttgcagacagctttgcggctctcaatcttgccaattccagtaacaagagt
tctgtcaaccctggtgctaatgaattcgtgcctaaagcagcctccatttcccacagttcc
agctcaccttcattctcatcgttcaacaacatcacacccatgccaacaagtacgcacagt
aaccatgtcattaacagtagctccaccctgtcaactggagtgagtcccacccccagccct
ggtatgtctccagcggactctcctctcatgatgagacggaatgcctcaccagttactcca
ttgcaaggcccaaataataatgcaggaacaatccaggagaatgttggaggtacaacatac
ttttattctgctgaagattttgctccccagtatcaaggaatggctcttcctaactttacc
atgttcccagcgctccctccacatattgcccacatgaaggttaaagcaaatatgccacag
ttcttcatgcccgatgaaatcaaaatggacttacttaacaggcatgcccttactttggca
cagcttgatcctgagcaaaatccagatattcctccagaagtggacaattaccacaacctg
tttcctttggaaccaccacaaggcaacaacctacaaaaatctacaacatttgggtatcca
actacatgttataaggctgtcaataccaaagacggaatgacatattgtttgaaaagaatt
catggctttaggttggtgaacacaaagtgcatggctgtcatcgacatgtggaaaaagtta
taccatccaaatattgtccagctgagagaagtcttcacaacaaaagcatttggcgatcac
tccatggtgtttgtgtatgattaccatcctgctgctgagactctaatggctcgtcacttc
aacaacccaactcatctgaatggctttaccagtccttacaatctagatggttcagctagg
ccctacagtgctggcaaaggggccaatggtccacggcagcatgcaggactcttgcctgag
agtttaatttgggcatatgtggtacaactgagctctgccctaagagctatccatgctgct
ggcttggcttgcagagccatggaccctacaaaaatactcatctgcagtaaatccaggttg
agaattaactgtatgggaatctttgatgtgttgacgtttgactcgagtcagaacaatcca
gtggccatgatgcctcattatcagcaagatgatctggtgtctttgggcaaggtggttctg
gcccttgcctgcaactccgtcttagggattcagcgcgaacacatccagacgtccatggaa
cttgttgcaagaaactactcggcagatctcaaaaatctcatcttatacttacttaccaat
caaactcgtcctcgaagtatcaatgacataatgcccatgattggggcccggttttacaca
cagctggatgctgcacaattaagaaatgatgtgattgaaaatgaacttgcaaaggaagta
gagaatggtcgtttaatgcgtttactgtgtaaactgggaactgtcaacgagaggccagag
tttaacatggacaccacatggtcagagacaggagataggtacatgctgaaactgtttcgt
gactatttgttccaccaagttgatgaaaacggtgccccatgggtggacatggctcatatt
gtgcagtgtttgaacaagttggatgctggtgtaccggaaaaggtttgtctgatgtctcga
gatgaacagaatatcatcactgttagttatacagagctcaagcgttgtttccagtcggct
ttttcagagctgttgtctgctagtcaccaaagtggcttttcttag
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