Liolophura japonica (common chiton): 135473286
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Entry
135473286 CDS
T09976
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135473286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135473286
Enzymes [BR:
ljp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135473286
Spliceosome [BR:
ljp03041
]
Complex A
U2 snRNP components
U2 related factors
135473286
Complex B
135473286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
DUF3928
Motif
Other DBs
NCBI-GeneID:
135473286
NCBI-ProteinID:
XP_064609207
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All DBs
Position
1:complement(11346651..11377561)
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AA seq
1047 aa
AA seq
DB search
MPRDSRHRRRSRSRSRSRSTSRDRKKRSPDRSRRNRRSRSRERRDNRSRSRERRRSRSRE
RKDRGRDRDERGRDRDRRDKDKDQKDRDRDREKDRKKSRSKSPQKDRKPSAKPTVHQDRP
LLRDRRSKSKSKSRSVSPAKVKFREGELRVKDEPLDKEEEQKRLELEMQKRRERIEMWRS
ERKKTQELTPINIAPPTKKWSLEDDDDDDEENQVKKENDNGEDEIDPLDAYMQTVIEDPK
PKGEKEVKKSAAVKMETDASANTVTSTQSGKFTIITAVAKKKVDPSKRKGELMLSNMDLM
EYSSEEEEEDLDMTMANMAKKKKELNVVDHNRIYYAPFRKDFYVEVPEISRMTPEEVDEY
RAELEGIKVRGKTCPKPIKTWAQCGVSKKIMDTLKRQNYEKPTPIQAQAIPVIMSGRDMI
GIAKTGSGKTLAFLIPMFRHILDQPPLEEDDGPISLILTPTRELAMQISSECKRFAKALG
LSVVCVYGGTGISEQIAELKRGCEIIVCTPGRMIDMLSANNGRVTNLRRCTYVVLDEADR
MFDMGFEPQVTKIVDNIRPDRQTVMFSATFPRQMEALARKILTKPIEVQVGGRSVVCKDV
VQEVILIDEDSKFLKLLELLGLYHEKGSVLIFVDKQEHADDLMKDLMKHSYPCLSLHGGI
DQYDRDSTIVDFKQGNVKLLVATSVAARGLDVKHLILVVNFDCPNHYEDYVHRCGRTGRA
GNRGYAYTFITHEQERYAGDLIKALELSGSPVPPDLEALWQEYKDRAKAEGKEIRSTSGF
KGKGFKFDETEAQLDNERKKLQKAALGLQDSDEEDAGVDIDQQIEDMFASVKRVTDVAKP
NPNQQLTAQATPPQPAQPTSASNQQKLELAKRLAARINKSLGPDAQDITQQAAAAFLKGE
MATPQVASKTIAEQMAEKINAKLGYRPQSEEEKEGQEQTQETFKRYEEELDINDFPQTAR
WKVTSKEALAQICEYSEAGITVRGTYILPGKEIKEGERKLYLAIEATSELAIQKAKKEIT
RLIKEELVRLQNSYSYQSGNKSRYKVV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgccaagagacagcagacatagacgacgttcccggtccagatcaaggtccagatcaaca
tctagagatagaaaaaaaagaagcccagacagatcgcggagaaacagacgttcccgttcc
agagagcgtagagataacaggtcacgctcgagagagaggaggcggtcgcgtagtcgggaa
aggaaagatcgtggtcgtgacagagatgagcgagggagagatcgtgacagaagggataaa
gacaaagatcagaaagatcgtgatcgtgatcgcgagaaagacaggaagaaatcccgctct
aaatctcctcagaaagacagaaaaccctcagcaaagcccactgtacaccaggataggcct
ttgctacgggataggcgttccaagagcaaatccaagtcccgctccgtcagtcccgccaag
gtgaagttccgcgagggggaacttagggtgaaggatgaaccactcgacaaggaagaagaa
cagaagagattagagctggagatgcagaaacgacgagaaaggatcgaaatgtggagatct
gagcgtaagaaaacccaggagttaactcccattaacatagctccacccaccaagaaatgg
tcactggaggatgatgatgacgatgatgaagagaaccaggtgaagaaggaaaatgacaac
ggggaggatgagattgacccactggatgcctacatgcagacagtaatagaagatccaaaa
cccaagggagaaaaggaagtaaagaaatctgcagcagttaaaatggaaactgatgccagt
gcgaacacagtaacatccactcagtccggtaaattcacaatcatcacagctgtggccaaa
aagaaggtggatccgagtaaacgcaagggggagttaatgttaagtaacatggatctgatg
gagtattcctctgaagaagaggaggaagacttggatatgaccatggcaaacatggccaag
aagaaaaaggagttgaatgtggtggatcacaatcgtatatactatgctccattccgtaag
gatttctacgtggaagtccctgaaatatcaaggatgactccagaagaggtggatgagtac
agggcagaactggaggggatcaaggtgcgagggaagacctgccccaaacctatcaagacc
tgggcacagtgtggggttagcaagaaaattatggacaccctgaaaagacagaactacgag
aagccgactcccatccaggctcaggccattccagtgataatgtcaggcagggacatgatt
gggattgccaagacaggtagcgggaaaactctggcctttctcattcccatgttcagacac
atcttggatcaaccgccactggaggaagatgatggacctatatctttgattttgacaccg
acacgagagctggccatgcagatctcatctgagtgtaagcggtttgccaaggccctgggc
ctgagtgttgtctgcgtgtacggagggacgggcatctcagagcagattgctgagctcaag
cgaggctgtgagatcattgtgtgcacaccaggccggatgattgatatgctctcagctaac
aatggtcgggtgacaaatcttagacgatgtacatatgtggtactggatgaggcagacagg
atgtttgatatgggatttgaacctcaggtcacaaagattgtggacaacattcgacctgac
cgacagactgtgatgttttctgccactttcccgcgccaaatggaagcactggccaggaag
atcctgacaaaacccatagaggtgcaggtcggagggcgcagtgtggtgtgtaaggatgta
gtacaggaggtgattttgatagacgaggacagtaaattcttgaagctgttagaactgctt
ggcctgtaccacgagaagggcagcgtgctgatatttgtggacaagcaggagcatgccgat
gacttaatgaaggacctgatgaagcactcctacccctgtctctctttgcacggcggcatc
gaccaatacgacagagacagcaccattgtagacttcaaacagggcaacgtcaaactattg
gtggccacatcagttgctgctcgagggttggatgtgaaacatttgatactggtggtaaac
tttgactgtcccaaccactatgaggattatgttcacagatgtggtcgtacaggccgtgcc
gggaaccgtgggtacgcttacacgtttatcacccatgagcaggagcgttatgcaggggac
ctgatcaaggctctggagctgtcagggtcgcctgtccccccagacctggaagccctgtgg
caggagtacaaggacagagccaaagcggaaggtaaagagatccgcagtacctcagggttt
aaaggcaaggggtttaagtttgatgagactgaagctcagctggataatgagaggaagaaa
ttacagaaggctgccttaggcttacaggactctgatgaggaggatgctggtgtggatatt
gaccagcagatcgaggacatgtttgccagtgttaagcgtgtgacagatgtggctaagccc
aaccctaaccagcagctgacagctcaggccacgcctccacagcctgcccagcccacttca
gccagtaatcagcagaaactggagctggccaaacgtctggctgcccgcattaataaaagt
ctggggcctgacgcccaggacattacgcaacaagccgctgcagcctttctcaagggcgag
atggcaactcctcaagtcgcatcaaagacgatcgctgagcaaatggctgagaagatcaat
gctaagttgggctaccgtcctcagtctgaagaagagaaggagggtcaagaacagacccag
gagacgttcaaacgttacgaggaggagcttgacattaacgacttcccacagactgccagg
tggaaagtcacctccaaggaggctttggcccagatctgtgagtattcagaggctggtatc
acagtcagggggacatacatcctaccgggcaaggagatcaaggaaggggagcgtaaactg
tacctggccattgaggccaccagtgaactggcaatacagaaagctaagaaagaaatcaca
aggctaatcaaggaggagttagttagattacaaaattcctattcgtatcagtccggcaac
aagtcccgctacaaggttgtgtga
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