Liolophura japonica (common chiton): 135473728
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Entry
135473728 CDS
T09976
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135473728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135473728
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135473728
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
135473728
NCBI-ProteinID:
XP_064609666
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Position
8:complement(51111400..51124792)
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AA seq
536 aa
AA seq
DB search
MAAPESVVEDDEAWLYGDSEEKDEKPEIAKGVPGRRESGVKGPADKEAGELVSGDGSGEE
EQADKNGQTEKPEGDEAENGGDAVEGSDDDDDDDDDVQVTIGEIKTGPAVYEAPRNLFKS
SGTYQKPAASTQKAPSKGLDLESQGSINGTPVYEFDLDSLQADDKPWRKPGADITDYFNY
GFNEDTWRQYCEKQRRLRMELGDRKGFIPSTPVSRPSTKEGSTTSSPSTSAVTPSNKDLF
RSAQPPPNRKMSGTIDVIGSTARDSRRPSAAAEPITTTDSSNYRRYPAGPPPPGIPPPLH
PPDYSMPPPGMPPPGMAPPGVPPIPGVSVPPPGYSAPPVSSYDNLVYYPPPGSGPPADRS
SSSYENRTTYPYNTQYNTPYNSTPSWDSRPTEYNWNYENRRGSPDSDSDFSVSDEERDYR
YSGSSSSRRDYYDRGDSRDSYYRDRERDRDRDRDRERGRERDRDKSRDRDRDRSHRDRDR
SERDSEKHRSSRRKARDAGEEESDHHRSKHKKSKRSKRDREEENMETTTATEEAAA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccagaaagcgttgtcgaagacgacgaagcatggctgtatggagactcagaa
gaaaaggatgaaaagccggaaattgctaaaggggtgcctggtcgccgcgaatctggggtt
aaggggcctgccgacaaagaggctggtgagctggtgagtggagacggaagtggcgaggaa
gagcaggctgataagaatggccagacagaaaagcctgaaggggatgaagctgagaatggc
ggggatgctgtagaggggtcagatgatgacgatgacgacgatgatgatgtacaggttact
attggagaaatcaagactggacctgctgtctatgaggccccaaggaatcttttcaagagc
tctgggacataccaaaaaccagcagcatctacacagaaagctccgtctaaaggtttagac
cttgagtctcaagggtccatcaacggtacacctgtctatgagtttgacctggacagtctg
caagctgatgacaagccatggagaaaaccaggtgctgacatcacagattacttcaactat
gggtttaatgaggacacttggaggcagtactgtgagaaacagcggaggttgaggatggag
ttgggagatagaaagggatttatcccatccacaccagtcagtagaccgtcaaccaaagag
ggatccacaacatcatcgccttccacatcagcggtcaccccctccaacaaagacctcttc
agatcagctcaacctccccccaacagaaagatgtctggcacaatcgatgttattggtagt
acagccagagactcacgcagacccagtgctgcggctgagccaatcacaaccactgattca
tccaactatcggcggtacccagcgggtcccccacccccaggcattccaccccctttgcac
cctccagactacagcatgccacccccaggtatgcctcctccaggcatggcccctccaggt
gtgccgcctataccgggtgtctctgtgccaccccctgggtactctgcaccacctgtcagt
tcctatgacaatttagtgtattacccgcccccagggtcaggacctcccgctgacaggagc
agcagttcatacgaaaaccggacgacgtatccttacaatacccaatacaacacaccatac
aattccacaccctcatgggattccaggccaacagagtacaactggaactatgaaaaccgc
aggggaagtcccgactcagactcagattttagtgtttctgatgaggagagggattacaga
tattccggcagctcttctagcaggagggattattatgataggggggatagtcgggactca
tattatcgtgaccgtgagagggaccgtgaccgagatagggacagggagcgaggacgagag
cgtgatcgggacaagtcacgggatcgagacagggaccgtagtcatagagaccgtgatcgc
tcagagcgagactctgaaaaacacaggtcatctcgcaggaaagctcgggatgctggagaa
gaagagagtgatcatcacagatcaaaacacaagaaaagtaaacgttctaaaagagaccgc
gaagaggaaaacatggaaaccaccacagctacagaagaggcagctgcgtaa
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