Liolophura japonica (common chiton): 135473898
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Entry
135473898 CDS
T09976
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135473898
03016 Transfer RNA biogenesis [BR:
ljp03016
]
135473898
Enzymes [BR:
ljp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135473898
Spliceosome [BR:
ljp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135473898
Transfer RNA biogenesis [BR:
ljp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
135473898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
135473898
NCBI-ProteinID:
XP_064609903
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All DBs
Position
8:41673417..41679152
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AA seq
732 aa
AA seq
DB search
MTAFEEMGVMPEIGKALEEMGWLLPTDVQAEAIPMILGGGDVLMAAETGSGKTGAFCVPI
LQIVHETLRDIREGKGGKISQRATTSAKWKMSVYDRGDALAIDPEGLLCQARDAGDWHGT
RSNKAVVGEGKYFYEATVTDEGLCRLGWSTDKATLNLGIDKFGWGFGGTGKKSHGKQFDS
YGEPFGMNDVMGCYLDLDNGMIKWSKNGVDLGNAYTIPAQLRNEKFYAAVVLKNAEMKFN
FGDSPFKYPPTGGYIGLSKANPSCVVDSRIVGSGSSAANSKPAPNAPQAIIIEPSRELAE
QTLTQLQKFKTHVTNPTVSELLIIGGVSSREQTDALMKGVDIVVGTPGRLEDLISTGQLA
LHQVRFFVLDEADGLLQQGYSPLIDRLHKQIPKVTNDGKRLQMIVCSATLHSFDVKKMAE
RLMYFPTWIDLKGQDAVPETVHHVVCMVEPKEDTSWMNLRQHVTTDGVHLKDRLQPGSNH
AETLSEAVKILKGEYTLKAIDEHKMEKALIFCRTKLDCDNLEKYMVERNKSNYTCVCLHG
DRKPQERKANLQKFKDGKVRFLICTDVAARGIDITGLPNVINVTLPDEKQNYIHRIGRVG
RAERMGLAISLVASVKEKVWYHSNCNNRGRGCYNTDLTDYGGCCIWYNEPQLLNEIQDHL
DITIDKVAPDMKVPVNEFDGKVVYGEKRKVGGSLYKGHVEFLAPAVSDLAQLEKRAQSSF
INLKYRKPFAAR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctttgaagagatgggagttatgccagaaattggcaaagctttagaagaaatg
ggctggttgttgccaacagatgttcaggccgaggccattcctatgatcctgggtggcgga
gatgtcttaatggcagcagaaacgggaagtggcaaaactggtgcgttctgtgttcccatt
ctccagatagtccatgaaactctgagggatattagagaaggtaaaggtgggaagatatcc
cagagagccactaccagtgccaagtggaagatgagtgtgtatgatcgaggagatgcattg
gccattgatccagaagggcttctttgtcaagctcgggatgcaggtgactggcatggaaca
agaagcaacaaagcggttgtcggagaggggaagtatttctatgaagctactgtcacagac
gaaggactgtgcaggctgggatggtccactgataaagctactctgaatctaggaattgat
aaatttgggtggggatttggtggaactggtaagaagtctcatggaaagcagtttgattct
tatggcgaaccttttggaatgaatgatgtaatgggatgttaccttgaccttgataacggc
atgatcaaatggtccaagaatggagttgacctgggaaatgcgtacacaataccggcgcaa
ttgagaaatgaaaagttctatgccgctgtggtgcttaagaatgctgaaatgaagtttaac
tttggagacagtcccttcaagtatccacctacagggggctatatcggattgtccaaggca
aaccccagttgcgtggtggattccagaatcgttggttctggatcctctgctgcgaattct
aaaccggcacctaatgcccctcaggctattatcatagaaccttcaagagaacttgccgag
caaaccctgacccagttacagaagttcaaaacacacgtcacaaacccaacagtgagtgaa
ttactgatcattggaggtgtgagttccagagagcagacagacgccttgatgaaaggtgtg
gacatcgtagtgggcactccaggtcgtctggaagatcttatctctacaggtcagctagcg
ctacatcaggtccgatttttcgttctggacgaggctgatggactgttacagcagggctac
agcccgttgatagatcgcctgcacaaacagatccctaaagttaccaacgacggtaagagg
cttcagatgattgtctgcagtgccacgctgcactcctttgacgtgaagaagatggctgag
cgactaatgtacttccccacgtggattgacctgaaaggtcaggatgcggtgcccgagacg
gtgcatcacgttgtttgcatggtggaacccaaagaggatacatcctggatgaatctgagg
caacacgtgacaacggatggagttcatctgaaggacaggctacagccaggttctaaccat
gcggaaaccctgtcagaagctgtgaagatcctcaagggagagtacactctgaaggccata
gatgaacacaaaatggagaaagccctcatattttgccggacaaagcttgattgtgacaac
ttggagaagtatatggtggaaaggaacaagagtaactatacctgcgtttgcctccacggt
gatcgcaaacctcaggaacgtaaagccaatcttcaaaaatttaaggacggcaaagttcgt
tttttgatttgcactgatgtggctgcccgcggcatcgatattacaggcctccccaatgta
atcaacgtcaccctgccagacgaaaaacagaactacatccatcgcattggtcgcgttggc
cgagctgagaggatgggtttggcaatctcactggtggccagcgtgaaggaaaaggtttgg
tatcactccaactgcaacaaccgaggcagaggatgctacaacacggacttgacagattac
ggaggatgttgtatctggtacaacgagccacagttgctcaatgaaatccaagaccatctt
gacatcactatcgataaggttgcaccagatatgaaggttccagtcaatgagtttgacggc
aaggtggtgtacggggagaagcggaaagtaggcggcagcttgtataaaggtcacgttgag
tttttggcgccagccgttagtgatttggcccaactggagaagcgcgcacaatcttccttc
atcaacctgaaatacaggaagccatttgctgctcgttga
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