Liolophura japonica (common chiton): 135474729
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Entry
135474729 CDS
T09976
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135474729
Enzymes [BR:
ljp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135474729
Spliceosome [BR:
ljp03041
]
Complex C
Other components
Complex C specific factors
135474729
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
135474729
NCBI-ProteinID:
XP_064610368
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All DBs
Position
9:3381938..3476263
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AA seq
701 aa
AA seq
DB search
MTKFVPKFWKPGTEGPGVLLNEERTASPGGQDTTSVKYNPNSSLSIEKQRQRLPVFKHRT
NILYLVENFQTVVIVGETGCGKSTQIPQYLLEAGWNVQGKLVGVTQPRRVAAVTVANRIA
EERGQVTGQDVGYAIRFEDVTDPETTKIKVLTDGLLIREIMADPLLRQYRVIMLDEAHER
SLNTDIIVGLLKKIQKKRADLRIIITSATLDAEEVRDFFNTNETNDPSKDTAAILTVEGR
TFPVDIYFSIDPVPDYVKAAVETVTKIHVQEKAGDILAFMTGQEEVQQVVSLLIEEARKL
NKTENVMKMKVLPMYGSLPASDQMRVFDRTSHFTRKIVIATNIAETSITINGIVYIVDCG
FVKIKAYQAKSGIESLVVIPVSQASANQRAGRAGRLHAGKAYRLYTEESFLQLPKTAVPE
MQRCNLASPILQLKALGIDNILRFNFLSAPPAQNMVNGLELLFALGALDDNGILTDPLGL
RMAEFPLSPMFAKLLLVSGDYGCSEEALTVSAMMQIQNVFLNPPKQKTTADRAKRKFAVA
EGDHITMINVYAAFLKNNKSSRWCNENFLNYKGLVRAVEVREQLKRLLRKFNVPLKSCQG
DVDVIRRCLTAGFFANAAKFHYTGVYKTIRHGHILHIHPMSVLHTEKPPPWVLFNEVVQT
TREFMRDVTVIRPEWLTELAPHFYQFGTDREIAAKRAKLDE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtttgtccccaagttctggaaaccaggtacagaaggcccaggagtactgctg
aatgaagagagaacagccagtcctggtggtcaggacacaacatcagtcaagtacaacccg
aattcatcactgtccatagagaaacagagacagaggctacccgtttttaagcatcgcacc
aatattttgtaccttgttgagaactttcagactgtggtcattgttggagaaactgggtgt
ggtaagagtacacagataccacagtacttgttagaggctggatggaatgttcagggaaaa
ctggtcggtgttacacagcccaggagagtagctgctgttacagtagctaatcgtattgca
gaagaaagaggtcaggtgactgggcaggatgttggctatgccatcaggtttgaggatgtt
acagatcctgagacaaccaaaatcaaagtgttaacggatgggcttttgatcagagaaata
atggctgatcctttgttgagacaatacagagtgatcatgttagatgaagcccatgagcgg
tctctaaacacagatatcattgtggggctactgaaaaagattcagaagaagagagcagat
ctacgtattataataacatcagctacccttgatgctgaggaagtccgtgactttttcaat
acaaatgagacaaatgacccaagtaaagatacggcagcaattttgacggttgaaggacgt
acttttcctgtggacatatacttctcaatagaccctgtgccagattatgtgaaggctgca
gtggagacagtgacaaaaatccatgtgcaggaaaaggctggagatattctagcatttatg
actggtcaggaagaagtccaacaagttgtttcgcttctgattgaagaagccagaaaattg
aataagacggaaaatgtgatgaaaatgaaagttttaccaatgtatgggagtttgccagca
agtgaccagatgcgtgtttttgatagaacatcacattttaccaggaagatagtcatagca
actaacatagccgagacatccataacaattaatggcatcgtttatattgttgattgtggg
tttgttaagatcaaggcgtatcaggcaaaatcaggaatagagtctcttgttgtgattccg
gtgtctcaagcctcagccaatcaaagagcaggaagggcaggacgacttcacgcaggaaaa
gcctacaggctgtacacagaagaaagtttcctgcaactgcccaagacagctgttccagag
atgcagaggtgcaacctggcatctcccatacttcagctgaaggctctgggcatagacaac
atcctcaggttcaacttcctctccgcccctcctgcgcaaaatatggtgaatggactggaa
ttgctctttgctttgggtgcccttgatgacaacggcatacttaccgacccccttggatta
aggatggcagaatttcctctctctccaatgtttgcaaaactgttactggtctcaggtgac
tatggctgctctgaagaagcactgactgtctcagccatgatgcaaatacaaaatgtgttt
ttgaatcctccaaaacagaagaccacagcggatcgagctaaaagaaaatttgctgttgcc
gagggtgatcacataacaatgataaatgtttatgctgcttttcttaagaacaataagagt
tccagatggtgtaatgagaacttcctcaactacaagggcctagtgcgagctgtcgaagtt
cgagaacagcttaaaagactgttaaggaagtttaacgtgcctctgaagtcctgtcaaggg
gatgtggatgtcattcgtcgatgtcttactgccggctttttcgcaaatgcagcaaagttt
cactacaccggggtttacaagaccatccgccacggacacattcttcacatccatccgatg
tcagtactccacaccgagaaaccgccaccatgggtgttgtttaacgaagttgtgcagact
accagggagttcatgagagacgtgacagtgatacgtccagaatggctgacagagttagcg
cctcacttctatcagtttggaactgatcgtgaaatcgcggcaaaaagagcaaaattggat
gaatga
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