Liolophura japonica (common chiton): 135475034
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Entry
135475034 CDS
T09976
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ljp03009
]
135475034
Enzymes [BR:
ljp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
135475034
Ribosome biogenesis [BR:
ljp03009
]
Eukaryotic type
Other ribosome biogenesis factors
135475034
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
FtsJ
Methyltransf_31
Methyltransf_25
RsmF-B_ferredox
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
135475034
NCBI-ProteinID:
XP_064610835
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Position
9:complement(11586194..11596661)
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AA seq
539 aa
AA seq
DB search
MGLYNEAADIIRKVKAKESSVKTLVLSKSTYPNKKQLYALVCETLKNTELLKRIEDKLDL
LKKEDILDGNEDLLHVLLYDQLIGRGIKGAHSYRIAIQRYRSVLKAEFKKLQAEDQAELK
TVRTNDLPRYARVNLLKTTVTEVTAALEEDGWRLLVDRRTEAVQTKSDSLRFADVVSKLS
EGEFMLDPDIPDLVVFPPHTDLHDHRLFVSGEIILQDKASCFPAHILSPPEGAAVIDCCA
APGNKTSHIASLIQNNGRIFAFDKKKARLSTMERLLSKAGVTCATIQHQDFLQVKANDPV
YKDVGYILVDPSCSGSGMVNRLNEKIEDSQERLTSLSHFQISILKHALSFPGIQRVVYST
CSIHQEENEMVVDEVMSQFKGKFFLKEVYPDWTNRGVKGNPCWKECIRMSPDLDLTNGFF
VACFERSLCETRSTTTTTDSESKSFDQKPKKRKKKFKDLEKVTSAEDYSDSTVITEQELP
KRKKKKSKKHKHENENHFENFSTKNCSEEPEPESVVHVMTKCKKHKKKKHKVKKSSVEK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgtataatgaggcagctgacattatcagaaaagtgaaggctaaggaatcttca
gtaaaaacgcttgtcctttctaagagcacatacccgaacaagaaacagttgtatgcactg
gtctgtgagactttaaagaacacagagttattgaagaggattgaagataaattagatctg
ctaaagaaggaagatattcttgatggaaatgaggacttactacatgtcttgctgtatgat
cagctcattggccggggtatcaagggagcacacagttacaggattgctatacagcgttac
cgctcagtgttgaaagctgaattcaagaaacttcaggctgaagatcaggctgaactgaag
acagtcagaacaaacgatcttcctcgctatgcccgtgtgaatctgttaaaaacaacagtt
actgaggtgactgcagcattagaggaagatggttggagattgctggttgacaggaggaca
gaagcagtgcagacaaagtcagactctttgagatttgcagatgtggtgtccaagttatca
gaaggtgagttcatgctggaccctgatatccctgacttagttgtgttcccaccacacact
gaccttcatgaccaccgactatttgtgtctggggagataatcctgcaggacaaggccagt
tgtttcccggcccatattttgtctccaccagagggcgctgctgtcattgactgttgtgca
gcacctggtaacaagacaagccacattgcaagcttgattcaaaacaacggaagaatcttt
gcctttgacaagaagaaagcacgattgtcgacgatggagaggctgctttcaaaagctggg
gtaacctgtgcaaccatacaacaccaggatttcttacaagtcaaagctaatgacccagtt
tataaggacgtaggctacattttggtagacccatcatgtagtggatcggggatggtaaat
cgtctgaatgaaaagatagaagattctcaggaacgtttgaccagtctgtcacatttccag
atttccattttaaaacacgctttgagctttcctggtatacagcgtgtggtctactcaact
tgttccatacaccaagaggaaaatgaaatggttgtggatgaagttatgtctcagtttaag
ggaaagttctttctaaaggaagtgtatcctgattggacaaatcgaggggttaaaggtaac
ccctgctggaaggagtgcattcgaatgtcacctgatctggatttgaccaatggtttcttt
gttgcttgttttgaaagatctctttgtgaaactagaagtacaacaacaacaacagactct
gagtcgaagagctttgaccaaaagccaaagaagaggaaaaaaaagttcaaagatttggaa
aaagttacttcagctgaagattacagtgactcaacagtgatcacagaacaggaattgcca
aaaaggaaaaaaaagaaatcaaagaaacacaaacatgaaaatgaaaatcattttgagaac
tttagcaccaagaactgtagtgaggagcctgaacctgaaagtgttgtacatgtaatgact
aaatgtaaaaagcacaagaaaaagaaacataaggttaaaaaatcatctgttgagaaataa
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