Liolophura japonica (common chiton): 135475141 Help Entry 135475141         CDS       T09976                                  Name (RefSeq) 5'-3' exoribonuclease 1-like   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism ljp  Liolophura japonica (common chiton) Pathway ljp03008   Ribosome biogenesis in eukaryotes ljp03018   RNA degradation Brite KEGG Orthology (KO) [BR:ljp00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     135475141   09123 Folding, sorting and degradation    03018 RNA degradation     135475141  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ljp03019]     135475141    03009 Ribosome biogenesis [BR:ljp03009]     135475141    03016 Transfer RNA biogenesis [BR:ljp03016]     135475141    03036 Chromosome and associated proteins [BR:ljp03036]     135475141 Messenger RNA biogenesis [BR:ljp03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      135475141   mRNA degradation factors    5'-3' decay     5' exonucleases      135475141 Ribosome biogenesis [BR:ljp03009]  Eukaryotic type   Pre-60S particles    RNases     135475141 Transfer RNA biogenesis [BR:ljp03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     135475141 Chromosome and associated proteins [BR:ljp03036]  Eukaryotic type   Gene silencing    piRNA pathway     135475141 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 DND1_DSRM DUF244 Motif Other DBs NCBI-GeneID:  135475141 NCBI-ProteinID:  XP_064610977 LinkDB All DBs Position 9:9900440..9943076 Genome browser AA seq 1943 aa AA seqDB search MGVPKFYRWISERYPCLSEVVKEFQIPEFDSLYLDMNGIVHVCSHPEDDNPHFRITEEKI FTDVSHYIEFLFRMIKPRRCFFMAIDGVAPRAKMNQQRGRRFRSAREAEELEKKAREKGE ILPSEKRFDSNCITPGTPFMARLQEYLKYFVVQKISSDPLWQSVQVILSGHETPGEGEHK IMDYIRYQKSQPGYDPNTRHCLYGLDADLMMLGLVSHEPHFCLLREEVRFGGKKDKNKRP ATPEETTFHLLHLSLMREYIDFEFSSLKEPLSFDYDLERVIDDWVLMGFLVGNDFIPHLP HLHIHHDGLPLLWRTYMKVLPTIDGYLNQGGHLNLPRFEKFMKELSKYDVDTFSDQFQDL KWLEGKVGKDGRGKKGKGQKGKSNKQGQGQTSDGAGGSNQFGVLVNLADDDEDFSNLTKD PPKSAVADLIDLNSRPDTPDTDDGDTFDSEFKMHKANYYMTKMNYVDASREVLQEQARGY VLAIQWILLYYFEGVPSWSWFYPHHYAPYMSDVTDFADMKIEFELGQPFLPFQQLMAVLP AASKEILPLPYQDLMTNPNSPVVDFYPVDFTTDLNGKLQEWEAVVLIPFIDEKHLLKAME PINAVLTDEEKARNRHGPHRLFEYSPEPLGEYPSPQPDSFPDIKVNRARCTDIPMFEFRV PSEKLYKGLPPGVRLDVYFPGFPTMKHISHKAQLKKAGVKVFQMNSRGENMVVSIIRDTE ELATETVAADMLGCPCFAGWPHLFEAKIVEVSDGDMRFKLSEPQSSSKGKALKNVEIIHE RLSESDSAIWSREAGFIKEQYYEKRGIEVGRTSILLKALPVMGRKYVCTNYGQVTLEKQW ATWPVAFALQACVKNISVHDPSYTQFTSLEELYAPSTPVFMLGFPHYGCQGEVLDVDSKM DGRIRVSVTILQEPNLQKICDREQSLSMQYLPGFHLAQRIGVSSHLLSRITGSIFMARGS QDTHKEEDHKVNIGLNLKFNKRNEEVPGFTKKVENQWLYSNKALDAVSQYFRRFPQLFDF ISRQERGGPDFYFEEDVFPSGSKDSLQKVSEFLKTLPCYDVKPMKAGAEIVDELMIKEIE KEVDRIKAVNKKKRKSVKMQVKPHLLFRPVFLHGGIIPDPEVTFMLFDRVVNIREGFSVP FGLRGTVVGIHHAQKEADTMYEVIFDSEFLGGITVRCSPGRGYRCASNCLINISHGERKE RVKQIVQGSANWSSSRTDNKGSNSSLSYAMASGSRGEQAGNSYSSLKNGLASRQTGNQNS NNSIGREADFGSRSSAQFSSARVTTNQTSRKGTGQTQSNKAKGISSEFADMWKEIQASTE AKSSPKKSGVSLSQAARVLDGQYPEKQQRHGIPPQSTPKAEKDLLNRQFEEADKRQGVPP SDATSTSQSGAMTKIDIQSLFGKASSSAPDPNVSEFAAMMNSLEIAGAAQGLSDGSVANV KGSSEDGTGAGLVERQKSLIVDDTLGQRTSPVSPSSQQALSGHSYGRQLSVQELFAGAKQ CASKAPASPTSSLLPASVVGEHTPEHQVQPIQDLASTARGDYPLEAQVRPIPDSAPAVRE HPPPESAPKISSHPANSRQLVPPLPVVNQLLGMHPPGLAPTAIPPPALLHPTLPLPSVPP HSGPHQRVVRNPVMELLELCNSSGMGPPKYDYTSSQKGQIAAYVTLSTGQKFHGSVCSTR EAASESAASMTLRQLEKMSFNMMMMGIPQPPGLQGPRWRPNLPFSPNSAFSPVQPRFGVP FLPPGQAQFTHPPPNFFQPHYLPQMPTGAGSDAGYHHGYSRQLKPADHVTSSGQQKEGER GTASNPFIPLQVIQKQKSPQKPMRSSQDRGEIPAYPTSSETTVPKSSLTTAAADGVPLPS VLTSSNSAQAASNSSLTVSNSTQAASNSAQRVPHTAAPASRASTHKSPAAHKEKTTAPQS DSGSKPQPKRTKSRLAAKFNFPN NT seq 5832 nt NT seq  +upstreamnt  +downstreamnt atgggagtcccaaaattttaccgctggatcagcgagcgatatccctgtctgagtgaagtt gttaaagaatttcagataccagagtttgattcattgtatctggatatgaacgggattgtt cacgtgtgttcacaccctgaagatgacaatccacatttccgtatcactgaggagaaaatt tttacagatgtttcacattacattgagttccttttcaggatgattaaaccacgcagatgt tttttcatggcaattgatggcgtagctccacgggcaaagatgaaccagcagagaggcaga agattcaggtctgccagagaggcagaagagcttgagaagaaagccagagagaagggagaa atcttgccatcagagaaacgctttgattctaactgcatcacaccaggcactccatttatg gccaggttacaagaatatcttaagtactttgtggtacagaagatctcctcagaccctctc tggcagtctgtacaggtcattctctctggtcatgagactccaggggaaggagaacacaag attatggactacatacgatatcagaagtctcagcctggctatgaccctaacactcgccac tgtctgtacggactggatgctgatctgatgatgctgggtttagtgagtcatgaacctcac ttctgtctgctacgagaagaagtgcggtttggaggaaagaaagacaaaaacaagaggcca gctaccccagaagagacgacttttcacctcttacatctttctctcatgagagagtatatt gactttgaattctcatctttaaaagagccactgtcatttgactatgacctggagagggtt atagatgactgggtgctgatgggattcctggtggggaatgacttcattcctcatctgcca cacctccacattcatcacgatggactacccctgctgtggaggacttacatgaaagtgcta cctacaatagatggttatctgaatcaaggtggccatctcaatctaccaaggtttgagaaa ttcatgaaagaattgtcaaagtacgatgtggacacattcagcgaccagttccaggatctg aagtggctagagggcaaggtgggaaaggatggacgtggcaagaaagggaagggtcagaag ggcaagagtaataagcaaggccagggtcagacgtctgatggggcaggaggcagcaatcag tttggggtgcttgttaacctcgctgatgatgatgaggacttcagcaacctcaccaaggat cctccaaagtcagcagtggcagacttgattgacctgaactctagacctgacacgcccgat acagatgatggagatacatttgacagcgagttcaagatgcacaaagccaactactacatg acaaagatgaattatgtagatgccagcagggaagtgcttcaggagcaggccaggggctat gttctggccatacagtggattctgctctactactttgagggggttccgtcatggagctgg ttttacccccaccactatgccccctacatgagtgatgtcacagactttgctgacatgaag attgagtttgagcttggtcaacctttcctcccctttcagcaactcatggcagtccttcct gcagccagcaaggaaattcttcctttaccctatcaggacctgatgacaaaccccaattct cctgtggtggacttttaccctgtcgacttcaccacagacctcaatggcaaactgcaggag tgggaggctgtcgtccttataccctttattgacgagaaacacctgctgaaggctatggag ccaatcaatgcagtgttaacagacgaggagaaagcaagaaatcggcatggcccccatcgg ctgtttgaatatagccctgaacctctgggtgaatacccgtcccctcaacctgacagcttc ccggacatcaaagtcaacagggcaagatgtacagatattcccatgtttgagttcagagtt ccatcagaaaagctttacaagggattgccacctggtgtgagacttgatgtctactttccc ggcttccccaccatgaaacatatatctcacaaggctcagttgaagaaggcaggtgtgaag gtgttccagatgaacagtcgaggggagaacatggtggtttctatcatacgtgacactgaa gagttagctacagagaccgttgctgcagacatgttagggtgtccatgctttgctggatgg ccacatctgtttgaggctaaaattgtggaagttagtgatggggatatgagatttaaattg tcagagcctcagtcatccagtaaagggaaagccctcaaaaatgtggagattattcacgag cgtttatcggagagtgactctgccatttggagtcgagaagctggcttcattaaagaacaa tactacgaaaaacgaggtattgaagttggcaggacgtcaattttgttgaaagctcttcct gtgatgggtcgcaagtatgtatgtacgaattatgggcaggtaactctggagaagcagtgg gccacctggcctgttgcctttgccctacaagcctgtgtgaagaatatatccgtgcatgac ccatcctacacacagtttactagcctggaagagttatatgccccttctacaccagtgttc atgttgggattcccacactatggctgtcaaggggaggtcctggatgtggactctaagatg gacggtcggatccgtgtgagcgttaccatcctgcaggagcccaacctacagaaaatttgt gacagagaacagtccttatcaatgcagtacctgcctggcttccacctggctcagcgtata ggcgttagttctcacctgctgtcacgcatcactggaagcatcttcatggcacgtggcagt caagacacacacaaggaggaggatcataaggtcaacattggcctcaacctcaagtttaac aagaggaatgaggaggtaccaggcttcaccaagaaagtggaaaaccagtggctgtactcc aacaaggccctggatgctgtctcgcagtacttcagaaggtttcctcaactgtttgacttc atcagccgtcaagaaagaggtggacctgatttctactttgaagaggacgtcttcccttct ggcagcaaagacagtttacagaaggtgtctgagttcttgaaaaccttaccttgttatgat gtgaagccaatgaaagctggtgctgaaattgtggatgagctcatgatcaaagagatagaa aaagaagtagacaggataaaggctgtgaacaaaaagaagaggaaatcagtgaagatgcag gtgaaaccacacctcctgttcaggcctgtcttcctgcacggtggcataatccctgacccc gaggtgaccttcatgctgtttgaccgtgtggtgaacattcgagaaggcttctccgtgccg tttgggctgcggggaacagtggtaggcatccaccatgcacagaaagaagcagacaccatg tatgaggtcatctttgattccgagtttctgggtgggataacagtcaggtgttcacctggt cgaggttaccgctgtgcgtccaactgtctcatcaacatatcccatggggagaggaaggag agggtcaaacagatcgttcagggctcggctaactggtcttcctcgcgtacagacaacaag ggaagcaactccagcctgtcctacgctatggcttctgggagcagaggggaacaggcggga aacagctattcctcccttaagaatggcctggcatccaggcaaactgggaatcagaacagt aataacagcataggtcgtgaggcagacttcggctctcggtcttcagcgcagtttagttca gctcgtgtcacaactaaccaaacaagtcgcaaaggcacaggacagactcagtccaataaa gccaaagggatttcatcagaatttgctgacatgtggaaagaaatccaggcatccacagag gcaaagtcctcccctaagaaatcgggcgtgtcgctgtcacaggcagctcgtgttctggat ggccagtacccagagaaacaacagcgccatggaattcctccacaaagcacacccaaagca gagaaagatctgctgaatcggcagtttgaggaggctgacaagcgacagggtgtacctccc tctgacgcaacttcaactagccaatcaggtgctatgaccaaaattgatatccagtcattg tttggtaaggcatcttccagtgctcctgacccaaatgtcagtgagtttgcagcaatgatg aactctctggaaattgctggggctgctcaaggcttgtcagatggttcagtagcgaatgtg aagggcagctcagaagatgggacaggggctggccttgtggagaggcaaaagtcattaatt gtagatgacacgttaggacagaggacttcccctgtctcaccaagttcccaacaggcactg tctgggcacagctatgggagacaactctctgttcaggagctgtttgcaggtgctaagcag tgtgctagcaaagcaccagcatctcctacgtcttcacttctgcctgcgtcagtagttgga gaacacactccagagcatcaggtccagccaatccaagacttggcatcaacagctagagga gattaccctctcgaagctcaggttcggccaataccagactctgcaccagcagtgagagaa catccaccgccagagtctgctccaaagatctccagtcatcctgcaaattcccgacagctg gtacctccacttcctgtggtcaaccagttgttaggaatgcaccctccggggctggcccct acagccatccctcccccggccctgctgcacccgacgctccctcttccatccgttccaccc cactcgggccctcatcagagggttgtccgaaaccctgtaatggagctgctggaattgtgc aattcttcaggaatgggacctcctaaatatgattacacatcctcacagaagggacaaatt gcagcatatgttactttgtcaacgggtcaaaagttccatgggtctgtgtgtagtacaagg gaggcggcttcagagagtgcagcgagtatgaccctcagacaactggagaagatgtcattc aacatgatgatgatgggcatacctcagccccctggtctacaaggacccaggtggcggccc aacttgccgttctcgcctaactcagcatttagtcctgtccagccaaggtttggtgttccg ttccttcctcccggacaagcgcagttcactcaccctccacccaacttcttccaacctcat taccttccacaaatgccgactggagcaggatcagatgctggttatcaccacggttactcg cgacaactaaagccagcagatcacgtgacctcgtctggtcagcagaaggagggagagcga gggacggcgagtaacccgttcataccgctacaggttatacaaaaacagaagtcccctcaa aagcccatgagatcatcccaagacaggggagagattcctgcctatccgacctcatcagaa acgacggtacctaaatcttcacttacaactgctgcagctgatggtgtccctcttccatca gtactgacgtcgtctaactcagcgcaggcggcttctaactcatcactaacggtgtctaac tcaacacaggcagcgtcaaactcagcacagcgggttcctcacacagccgctcctgcatca agggcatcaacccataaaagtcctgctgctcacaaggaaaagacaactgctccacagtct gactccggtagtaaacctcaacccaaacgcacaaaatctagactggcagccaaatttaac tttccaaactga

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