Liolophura japonica (common chiton): 135475157
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Entry
135475157 CDS
T09976
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135475157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135475157
Spliceosome [BR:
ljp03041
]
Complex B
Other components
Prp19-related factors
135475157
Complex C
135475157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
RRM_3
zf-CCCH
zf-CCCH_4
RRM_PARP14_3
zf-CCCH_10
zf-CCCH_3
zf-CCCH_12
RRM_5
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
135475157
NCBI-ProteinID:
XP_064611008
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All DBs
Position
1:24205520..24214152
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AA seq
428 aa
AA seq
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MAMSKGANTYNRQNWEDSEFPILCQTCLGDNPYIRMTKEKYGKECKICARPFCVFRWCPG
ARMRFKKTEVCQTCSKMKNICQTCLLDLEYGLPVQVRDAALKLQDDIPKSDVNKEYYTQR
MEREAAKTDGTNPLGALSGKAQAPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRYYGMDDPVADKLLKRYANMPKLDPPEDKTITTLYVGNL
GEKVAEKELRDHFYQFGEIRSVNVVSKQQCAFVQFTNRQSAETAAEKCFNKLIINGRRLN
IKWGRSQAQQAGVRMDGEEPVYEPVPGLPGVLPPPPQDMGNNFFNLQQPPPMMPPPPPGG
PPRGPPPMHPMGGPMAPMGHMMRGPPPPGMRLPPPPPGMMPMRPPPMPPRGALPVHYPSQ
DPTRMGAK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtcaaaaggagctaacacttataatcggcaaaactgggaggattctgaattc
cccattctgtgtcagacatgcttgggagacaacccttacattcgaatgacaaaagagaaa
tatggaaaagagtgtaaaatttgtgcacgccctttctgtgtatttcgttggtgccctgga
gcaagaatgaggttcaaaaaaacagaggtctgccaaacctgttcaaagatgaagaatatc
tgtcaaacatgtctacttgatctggaatatggcttacctgttcaggtgagagatgctgcc
cttaagttacaagatgatattccaaaatcagatgtaaataaggaatattatactcagcgc
atggaaagagaggctgccaagacagatggaactaaccctctaggtgctctgtcagggaag
gctcaggcccctagtgacatgttactgaagctagccagaactaccccatactacaagaga
aacagacctcacatctgctctttctgggtcaaaggagagtgtaagagaggtgaagagtgc
ccctataggcatgagaaacccacagatccagatgacccgttggcagatcagaacataaag
gacagatattatgggatggatgacccagtggcagataaactgttaaagagatatgcaaat
atgccaaagctagatcccccagaggacaaaaccatcaccaccctgtatgtgggtaatttg
ggagagaaggtggcagagaaagagttaagggaccacttttaccagtttggtgaaatccgc
tcagtcaatgtggtcagtaagcagcagtgcgcatttgtacagttcacaaaccgccagtcc
gcagagacagctgccgagaagtgcttcaacaagctcataattaatggtagaaggttaaac
attaaatggggccgatcccaggctcagcaggccggagtaaggatggacggagaggagcca
gtctacgaaccagttccaggtctccctggagtgctaccacctcctccacaagatatgggt
aacaacttcttcaacctccagcagcctcccccaatgatgcccccaccccctccaggtgga
ccacccagaggccctccacccatgcaccccatgggaggtcccatggcgcccatgggacac
atgatgagaggaccaccacccccagggatgaggttaccacccccaccacctggaatgatg
cccatgaggccacccccaatgccgccccgaggggctcttcctgtacactacccatctcaa
gacccaactcgtatgggagcaaaataa
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