Liolophura japonica (common chiton): 135475178
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Entry
135475178 CDS
T09976
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135475178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135475178
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135475178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Vps39_1
RepB_C
DUF3908
TPR_3
Motif
Other DBs
NCBI-GeneID:
135475178
NCBI-ProteinID:
XP_064611037
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Position
9:complement(31162126..31185743)
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AA seq
823 aa
AA seq
DB search
MDLGTDGFGDLLHQAEQLTAEMDSGTDLPRVERNLQQILETGQRLWTRTAQISQDATDVK
ASILLGSKGFDVPRISQKLEGLSAAKTFEPLEPILDTDVQGFLRNERENTVLAVIEQTRN
RTFEEAEKRHWECAENEWEREKQKILNALIGAGQELDLQPESESILGESISMHGRSALDN
VEMAYARQVFAYNDQIIKGGLRPNLVEMFSEVAQIIDDKNIIELWEMVRFMVDVPVASGT
SIQNTRTSRKTQQGFVRQARKYLEQNYVKYITTTIYGNLQQAQLGGIPGTYHLVRSFLNV
KQMNLRGLEDGTVEGHPVWAMLYYCLRCGDLKAAQQVVDKAPHNLGEHFPNFLQEYSSYE
GHRLSPSNETMIRLQYRRAIKNSSDPYKRAVYCVIGQCDFSEDHTEVADKIDDYLWVKLC
HIHPETNDMGSETFTLQRLQSILYEDYGESHFNAYHQPHLYFQVLWLTAQFEAALEFLSR
IEKLRSHAVHVALALHELHILHTPHTIQAQMLSKDSSDPDPLRRLNIARLIMMYTRKFEA
TDPREALQYFYFLRGLRTSQGENLFMSCISELVQETREFDMLLGRLEADGTRRPGVIDKF
HGDTQKIIELVAKDTEVKGLLEDSIKLYDLAGKHDKVLELLNKLLGQVVSQPSSAQSSRD
RVKNLAVSVAQRYRATGHDGNQSNSVTFYLLLDLVTFFDLYNSGNYDQAIEVMQELKLLP
LTTDLVEGKVNDFKHYTVEVRKCLPDILLATMNIVLNKYKNAKNTSLQSPGGRLFGAADG
GKETYLNYLRSQARALIMFTGMLPYRMPGDTNARLVQIEVLMN
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggacttgggtacagatgggttcggagatctgctccatcaggcggagcagttgaccgct
gagatggacagcggtactgatctgccgagagtggagagaaacttacagcaaatcctggag
actggccagagactgtggacaagaacggcgcagataagccaagatgccacagatgtcaag
gcctcgattttgcttggttccaaaggctttgatgtgcccagaatttcacagaagttagaa
ggtctcagtgcagccaagacgtttgaacctttagaaccaatacttgatacagacgtacag
ggttttttgaggaatgaacgtgaaaacacagttcttgctgttattgagcagaccagaaac
aggacatttgaagaggcagagaaacgccactgggaatgcgcagaaaacgaatgggagcga
gaaaaacagaaaatcctgaatgctctgataggagcaggtcaggaattggacttacaacca
gaatctgagagtattctaggagagagcattagcatgcatggccgcagtgcattggacaat
gtggagatggcctacgccagacaagtttttgcctacaatgaccaaataatcaaaggtgga
cttcggccaaatttggtggaaatgttttctgaagtggcccaaattattgatgacaagaat
atcattgaattgtgggaaatggtgcgttttatggtggatgttcccgtggcaagtggcact
agcattcagaacacgagaacttccagaaaaactcagcaaggatttgtcagacaggcccga
aagtatttggagcaaaactatgtgaaatacatcaccacgaccatatatggcaacctgcaa
caagcacagctgggcgggattccaggcacctatcacttggtgcgcagctttctgaatgtg
aagcagatgaacctgaggggtcttgaggatggtacagttgaaggacatcctgtgtgggcc
atgctgtattactgcttacgctgtggagaccttaaagccgctcaacaggttgttgacaaa
gccccacacaatcttggagaacacttcccgaattttcttcaagaatatagcagctatgaa
ggacatagattgagccctagtaatgaaacaatgatcaggttacagtacagaagagcgatc
aaaaacagcagtgatccttacaaaagggctgtgtactgcgtgattggacagtgtgacttc
agcgaggaccacacagaagtcgctgacaagattgacgactacctatgggtgaaactttgc
cacatccatccagagacgaatgacatggggtcagagaccttcaccttacagcgactacag
tctatactttatgaggactacggtgagagccatttcaatgcgtaccaccagccccacctg
tacttccaggtgctctggttaacagctcagtttgaggctgccttggagttcctgtcccgc
attgagaagctccgctcccacgctgtccatgtggccctagccctgcatgagctccacatc
ctccacaccccccacacaatacaggcgcagatgttgagcaaagactctagtgatcccgat
cccctccgacgtttgaatatcgcccgacttatcatgatgtacactcggaagttcgaggcc
actgaccctcgggaagccttacagtatttctacttcctcagaggtttgcgtaccagtcaa
ggggagaaccttttcatgtcctgcatcagtgagcttgttcaggagaccagagagtttgac
atgctccttggcaggctggaggcagatggtacaagaaggcctggagtgattgataaattc
catggtgacacccagaaaataatagaattggttgccaaggatacagaagtgaaagggctg
ttggaagattccatcaagttgtatgacttagcagggaaacatgacaaggtgttggagttg
ttgaacaagctgttaggccaggtggtctcccagccaagctccgcccaatcctcaagagac
cgagtgaagaacctggctgtcagtgtggcacaaagatacagagctactgggcacgatggt
aaccaaagcaacagtgtaaccttctatctcctccttgacttagtgaccttttttgacctg
tacaattcgggaaattatgatcaagcaatcgaggtgatgcaggaactaaagcttcttccc
ctcactacagacctggtggaagggaaggttaatgacttcaaacattacactgttgaggtg
aggaagtgtttacctgacattctgctggccaccatgaatatcgtcctcaataaatacaag
aatgccaaaaacacgtctttacagagtccagggggcagactatttggtgcagcagatggc
ggaaaagaaacgtacctaaactatctgaggagtcaggctcgggcgttgatcatgtttact
gggatgctaccgtaccggatgcctggggataccaatgctagactggtacagatcgaagtc
ctcatgaactga
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