Liolophura japonica (common chiton): 135475426
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Entry
135475426 CDS
T09976
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ljp03037
]
135475426
Cilium and associated proteins [BR:
ljp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135475426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
135475426
NCBI-ProteinID:
XP_064611384
LinkDB
All DBs
Position
9:complement(16280715..16322972)
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AA seq
2188 aa
AA seq
DB search
MPATRLRPYPVTSAAKYTSPHRLLPVVSQTQQNSTKPPYMLYTMEEAMQPGVLSHGQKLE
HSVLRDSEDYILKGDNSSPSAKVPARVREIITRNLAGDDRAATATMTTPTASQLSEENKL
LSSELNRVEDLLAQSRAERDELGIKYNALSERLEQSLKGEGLDGGDQASKPLVQQNIDLR
RKLEEEHNSYKRKLQAYQDGQQRQAQLVQKLQAKLLQYKKKCQDLETMVRSKELDMRRYG
SKVQTSADTLKKKLETAEERLKLAESDHAMDLETALIKLEEEQQRSASLSHVNGMLREQL
DQATVANQSLTSDIQKLTQDWQRAREELEAKEAEWRDEEQSFNEYFSNEHGRLLSLWRAV
VSFRRQFNEMKMATERDMSTMRSDMTRSSRSMHSACLNFSANARNSETQSQVSLDRERGE
KITIETQYREKVREVIELQTKYEAHSADLNSRINELTMANEKLKVQLEERGKTVSTLQKS
ISQLETRAETGNYSDGEMPENEAARQIREDTDVLHAALRDIAQAVINDADQDDSGDGERL
AKTFRERSLSPSRPRSPRLQMKASRTRSISPRGRSRSPAFADATFSAVQAALNKRQLQVQ
ELRAKLNATRDQNTTVRKQMDEVENERKRLEYQVLQLKDEIDIARREREDSSRDRDRIKN
VLTAADTEKSQLEKLRAALNEQIEALSSENEKLQMANAELQQQRDQLEDEKDDMTKDKER
QIKENERCHRVIDQTEQKVSNLKEELVATKEAFNRALLDKEVLEQQRAEVTEALSRTEVH
KAEVEVEISKVKADEASLRDAILKMQALNEGLGQDKIELNKIIMQLEAEYTSLLNEKTAL
EQERLGMREELVRVEQEKMDLDTEKMGLNQTLELSEMTRQQLEDEIQVLVRDKADVTEQL
NSISRQKQSLAEELISTRRDVERQTVTVTTVTKEKEILTQDKAELVVQLTAAERSNRQQS
ETIAALTSEKESLEGSLYEANQSITQLETRKEQLEGENQELLLRKENLQGEIQRLLQEKE
HEVERLERQKEALNTRLLQMEKDLQLALAQEKQAHEEDVERLSREKENHRLQFESEREEM
VHQNAMEKEDMLNRMERERQELSEEILSLQRERDDQLLIAENDKQQALSLVEQEKCTLQE
KLNNLNLDLENSSTEYDRLKREALARQEQDKLCINSLNSELRNFRVQFEESTVAHEKEVK
DLTNQIRDVMRKKESALKEVAELKVQLKMVEEARDNIRRDLIEANRKIREGEEQRELMRK
DILDLKRSLNDETREKETIGQTANDLRNKVKQSEAEKIELSRHLQDSKQRGSILEEQKVG
IQKEAGELRSSLREVEKARLEARRELQELRRQIKQLDGERSKLGKEVVDLQSRVARDEEK
EEESRRASFDLKQKVVETEASREALRKELANLQRKMAELIDESRVKEKDYMMALEDSRRS
EHRLEEQRRILEANLENASSDMADLKMKLSGTEGRVNALEATLARLEGAKRDVEFKLSSV
VSSLRRTIGFRPSRARSPSPSRARSTSPRRSRPSSPTKGFDNTYTTTTDGMGNPIPRTGS
PERSLSRSGSPSRYDTSMVQASDVDPEAVRLALRDFVNQLATAERERDDAVVQVRSLCIQ
LKELEEDKTRTETRLQNLQKNLGAVEEDKRGIDGRLASAQTALMLQEETIRRNERERKAL
TDKVSSLEHKLTSMETEKRQLMEKLAKQKQTETKLDDDKKQLKQMIDDAENRCTKIELSR
RSVEGELQRLRLVMNDKETENQVLQERVDGLNKQIQDLESKAQSLQLTIDRLGVALAKTE
EEGHSHKDKVQALNLSLSDSNSVINELEERVTQLQRALTSSEHDRRVLQERLDTTRQALN
EAKKQNHSLLERLQTLQSEVSEAEVRGAELEGQLRQNSNVLVQRQESEQELNQRLSKLSL
ERQTLQETVISLQRQLGGLETEKKEMERSHIRLEKDKSALRKTLDKVEREKMRTEEIATK
TVVERGSLDRHMQRLEEDNVEMQRQIQQLQAQLAEAEQQHAQRLIDLTTRHRSETEMETE
RLRTAQIQAERTLESRERSNRQKVKGLEEQINTLKDQLSQELRKRQSYISRSARTGDEIK
DIRNILDNSLSNIARDPSLDPILLDQETRKLDDSLRFSSPTRLSPRHRSPVRKSSPARQV
RITSTPTSRSRGSMRRSTTSPSPIAFRN
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaactcgtctgcgaccttacccagtcacatccgcagccaaatacacatcaccc
cataggttactaccagtggtgagccaaacccaacaaaactcaacgaagccaccatacatg
ctgtacacaatggaagaggcaatgcagcctggagttctatcacatggacaaaaactcgag
cactctgtcctacgagacagtgaagattacatcctcaagggagataactctagtccctca
gccaaagtccccgctcgtgtcagggagatcattaccaggaatttagccggggacgacagg
gcagccacagctaccatgacgactccaacagccagtcagctttcagaagaaaataaactg
ttgtcctctgagcttaatcgtgtggaagatcttctggctcagagcagagcagaacgtgac
gagcttggcatcaaatacaatgcactcagtgaaaggttggaacagtctctaaaaggcgag
ggtctggatgggggagaccaggcctccaagcctcttgtccagcagaacattgatctgaga
cgtaagctggaagaagaacacaacagctacaaacgtaagctgcaggcatatcaggatggg
caacaacggcaggctcagctcgtccagaaacttcaggccaagcttttacaatacaagaaa
aaatgtcaagatttggagacaatggtgcgttccaaagaactggacatgcgtcgctatggt
tccaaggtacaaacctctgccgacaccttgaagaagaagttggagactgcagaagagaga
ctaaaattagccgagagtgaccacgccatggatttagagacggcactgataaagctggag
gaagagcagcaaaggagcgctagcctgtctcatgtgaacggcatgctgcgagaacagctg
gaccaggccacggtggccaatcagagcctgacaagcgacattcagaaactgacccaggac
tggcagagagctcgtgaagagttggaggccaaggaagctgaatggagggacgaagaacag
tctttcaatgagtacttcagcaacgaacacggccgtctgttgtctctgtggagagcggtt
gtatctttccgtcgacagttcaatgaaatgaagatggccacagagcgtgatatgtccacg
atgcgctctgatatgacgcgcagctctcgcagcatgcactcagcctgtctcaacttcagc
gccaatgctcgtaactcggaaactcagtctcaggtgtctcttgaccgtgaacgtggggaa
aagatcaccatagaaacacagtacagagaaaaggttagagaggtcattgaactccagacc
aagtacgaagctcacagtgcagatctcaactccagaatcaacgaactgaccatggccaat
gagaagctcaaggttcaattagaagagagagggaagactgtgtccactctccagaagtcc
atttctcaacttgagactcgcgccgagactggtaactatagcgacggagagatgccagag
aatgaggcagcaaggcagattcgtgaagacactgacgtccttcatgctgcactacgagac
atcgcccaagctgtcatcaatgatgctgaccaagatgattctggagatggagagcgattg
gctaaaaccttccgtgagcgctccctgtcaccttcgagacctcgctcacctcgtctccag
atgaaagcctctcgtacccgctccatctcaccaagaggccggtcccgatctcccgcattt
gctgatgccactttctctgctgtgcaggctgcccttaacaaacgccagctgcaggtacaa
gagctgcgcgctaaactcaacgccacacgagaccaaaacacaactgttcgtaagcagatg
gacgaggtggagaatgaacgtaagcgtctggaataccaggtcctccagctcaaggatgag
atcgacattgcacggcgggaacgtgaagactcaagccgagaccgagataggatcaagaac
gtgctcaccgctgcggacacagagaaatcccagctggagaaacttcgagcagctttgaat
gagcagatcgaggctctcagcagcgaaaacgaaaaactacagatggcaaacgctgagcta
cagcaacagcgcgaccagctggaggatgagaaagatgacatgaccaaggacaaggaacgt
cagatcaaagaaaatgagagatgccatcgcgtaatagatcaaactgagcagaaggtatcc
aatttgaaagaagagcttgttgccaccaaagaggcattcaacagagctcttctggataag
gaggtattggaacagcagagagcagaggtcaccgaagcactctctagaacagaggtacac
aaggctgaggtcgaggtggagatcagcaaggtgaaggctgatgaagccagcttgcgagat
gccatcttgaaaatgcaggcgctgaatgaaggtcttggtcaagacaagattgaactcaac
aagatcattatgcagctggaagcagaatacacatcactcttgaacgagaagacagctcta
gagcaggagagactgggaatgagggaggagctagtgcgtgtggagcaggagaagatggac
ctggacacagagaagatgggacttaaccagaccctggagctgtccgagatgactcgccaa
cagctggaggatgagatccaggtgctggtcagggacaaggccgatgtcactgagcagctc
aatagtatttcaaggcagaagcagtccttagctgaagagctgatttcaacacgtcgtgac
gtggaacgtcaaactgttacagtcaccactgttacaaaggagaaggagatcctgacacag
gataaggcggagcttgtcgtgcaactgaccgcggcagaaagaagcaacaggcagcagagc
gagacaattgctgctctcacttcagagaaggagagtttggagggttccttgtacgaggcc
aaccagtccatcacacagctcgagacccgcaaggagcagctggaaggagaaaaccaggaa
ctgctgctgagaaaagagaacctccagggtgagatccaacgactcctacaggagaaggag
catgaggtggagagactagaaaggcagaaggaggccctgaacacccggctcctgcagatg
gagaaggacctacagctagccctggcacaagagaaacaggctcatgaagaagatgtggag
agacttagccgagaaaaggaaaaccatcggcttcagtttgagtccgagcgagaggagatg
gttcaccagaatgccatggagaaggaggacatgttgaacaggatggagagagagcgtcag
gagctcagtgaggaaatcctcagcctacagcgagaaagagatgaccagcttctcatcgca
gagaatgacaaacaacaggccctttcattggtggagcaagagaagtgcacactgcaggaa
aaactgaacaacttgaaccttgacttggagaatagctcaacggaatatgatcgtctgaag
cgtgaggcactcgctcgtcaagagcaagacaaactctgcatcaacagtctaaactctgag
ctccgcaacttccgtgtacagtttgaggaatctacggttgctcatgaaaaggaggtcaaa
gatctgaccaatcaaataagagatgtcatgcgtaagaaagagagcgctctgaaggaggtt
gcagagctgaaggttcagttgaagatggtggaagaggccagggataacatccgcagagac
ctgattgaggccaaccgtaagattagagaaggtgaagaacagagagagctgatgcgtaag
gacattttggatctgaagcgctcactgaatgatgaaactcgtgagaaggaaacaataggt
cagacagcaaatgatctgcgaaacaaggtgaagcagtctgaggcagagaagattgagttg
agtcgtcatctccaagactcaaaacaaagaggctcaattttggaggagcaaaaagtaggc
attcagaaggaggctggagagctgcgatcaagtctgcgtgaagttgagaaagcacgtctt
gaggctcgacgtgaactacaggagctgagacgtcagattaaacagctggacggagaaaga
agtaaactgggtaaagaggtggtcgatctccagtcccgtgtggcacgtgatgaagaaaaa
gaggaggaatctaggagagcctcatttgacctcaaacaaaaggttgtggagactgaggcc
agcagagaggcattgcgtaaagagctggctaacttacagcgtaagatggcagagctgatt
gacgaatcccgtgtgaaagagaaggactacatgatggcgctggaggacagcaggcgctca
gagcaccgcctggaagaacagcgccgcatactcgaagccaacctggaaaacgcctcctca
gacatggccgacctcaagatgaagctgagcggcactgagggaagagttaatgcccttgag
gcaactcttgcacgtctggagggagctaaaagggatgttgagttcaagctgagcagtgtg
gtttccagtctgcgcaggacaattgggttccgtccatcccgtgctcgctccccaagccca
agtcgtgcccgcagcacaagcccaaggagatccaggccttcgtcacccaccaaaggtttt
gacaacacatacaccactaccacagacgggatgggaaatcccatccccaggaccggctcc
ccggagcgtagcctgagccgtagtggctccccaagccgctatgacacttccatggtgcag
gcgtccgacgttgacccagaggctgtcaggttggctctgagagactttgtcaaccagttg
gctacggctgagagagagagggacgatgctgtggttcaggtacgcagtctgtgtattcag
ctgaaggagcttgaggaggacaaaactcgcaccgaaaccaggctacagaacctgcagaaa
aacctgggagccgtcgaagaagataagcgtggtatcgatggccgtctcgccagcgcccag
actgcactcatgctccaggaggagacaatccgacgcaatgagcgtgagcgtaaggcactc
actgacaaagttagctccctggaacacaagctgaccagcatggagacagaaaaacgacag
ctcatggagaaacttgccaagcaaaagcagacagagacaaaacttgatgatgacaagaaa
caactgaaacagatgatagatgatgcggagaatcgctgcacgaagatcgagctgtcacgc
cgttctgtagagggagagctgcagcgcctgcgattggtgatgaatgacaaggagacagaa
aaccaggtgttacaagagcgtgtggatgggttgaacaagcagattcaggacctggagagc
aaggctcagtctctgcagctgaccatcgaccgtctcggggtggcactcgccaagacagaa
gaggagggacactcacacaaggacaaggtacaagctctgaacctgtccctgtctgacagt
aactctgtgatcaacgaattagaggagcgagtcacccagctgcagagagcactaaccagc
agtgaacatgacagacgtgtcttacaggagagactagacactaccagacaagccctgaat
gaagcaaagaagcagaaccacagtttattggagcggctgcagacattacagagtgaagtg
tctgaagcagaggtccgtggagccgagcttgagggacaactcaggcagaactctaacgtt
ttggttcagcgacaggagtctgaacaggagctgaaccagcgcttgtccaaactgagcctg
gagcgccagacgctacaggaaaccgtcatcagtctgcagcggcagctgggcgggctagag
acagagaagaaagagatggaacgatcacacattcgcctggagaaggacaagagtgcactg
aggaaaaccctggacaaggttgagcgtgagaagatgcgaacagaggagattgccacgaag
actgttgttgaacgcggcagcctggacagacatatgcagcgtctggaggaagacaatgtg
gaaatgcagagacaaattcagcagctgcaggcgcagttagccgaggctgaacagcaacat
gctcagagactgattgacctgacgacacgtcaccgctccgagacagagatggagacagag
cgtttgcgcacagcccagatccaagctgagcgcaccctggagtccagagagaggtcaaac
agacagaaggtcaaaggtctggaggaacagatcaacactttgaaagaccagctgagtcag
gaattgaggaaacgccagtcttacatttcccgaagcgcaaggactggagatgaaatcaag
gacattcgtaacatccttgacaactcactgtcaaatatcgcccgtgaccccagtcttgat
cccatcctcctcgaccaagagacccgtaaactggatgactcgctccgcttctcttcccca
acacgcctgtcgccacgtcaccgatccccggtccgcaagtcttcaccagcccgccaggtg
cgcatcacgtccacgcccacgagtcgctcacggggatccatgcgacgcagcacaacaagc
cctagtcccatagccttcagaaactaa
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integrated database retrieval system