Liolophura japonica (common chiton): 135475565
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Entry
135475565 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135475565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljp03021
]
135475565
03036 Chromosome and associated proteins [BR:
ljp03036
]
135475565
Transcription machinery [BR:
ljp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135475565
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135475565
PBAF complex
135475565
GBAF(ncBAF) complex
135475565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
135475565
NCBI-ProteinID:
XP_064611563
LinkDB
All DBs
Position
1:81154074..81172986
Genome browser
AA seq
1126 aa
AA seq
DB search
MAVQRKKDGGPNVKFFESVETIAQFDSVRTWLHKNCKKYIQAEPPTNKNLASLVVQLLHF
QEDAFGKQVSNPALTKLPMRCFLDFKPGLALCHILAAVYKFKSDQGWRRFDFQLPSRMDR
NVEMFMQIEKSLVQNKCLTLPHIFIRPDNDRGLIPKLKDIIKRHQGTIADNPDDATHIIH
PLPVNSNPEDEFLRPVLKRDRHTMVHWWYFPDSYDTWVADVNIDQDVEPPTTPNGAWEVN
ARWLLDLEEFNEWMNEEDYLVDEDSSSESSGGKKGKRSSSRVKLSLDDITPSPDSDRRDK
KKQGKRKRSPSPGADKKKRKSLRSPAVTGPKKKSWREEEEDLTKDMEDPTPEPNIQEVQL
AKQVPGSRSQKDSEVQPVKGGTMMDLDEDQEEKVEKDEGTGTREGTPAGEEGKEGEKKDE
QDDNVTEQTHHIIIPSYSAWFDYNSIHAIERRGLPEFFNGKNKSKTPEIYMAYRNFMLDT
YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDAESRPTPMGPPPTSHFH
ILADTPSGLQPVNPPKTSQPSAAQQVMNFTDRNKDKDGDKERDQNFGLRTDMYAKKALKD
KGAATRSREWTDQETLLLLEAMEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLED
DNGQLGPLTYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPPAL
IDAHVRSVEAAINSGKGGDATFGLDKSGIAGTSSDKEEGTTTTTEEPKKEAGEEEKETKE
EKTEESMDTSETKKEEVAEVKKEADTEENKDSEEGEKEKKQEEDGEKKEEEEEKKPEDGT
VSIAKPKDDGGNIATAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRH
FEELETIMDREREALEYQRQQLLQERQQFHMEQIRAAEYRARQIAAQQLDKEQRQQQGDP
GAGGPGGASAASQNPALAAAVAQGYPSHGSPMPPQGPATHPQAVAHGSPAPPSGSHQATP
MNSGMSSSAPTPLGQSSSMSPSYPNQGTPISHQNIGGHFPSSHCQGFTGVTHGPPMASHM
PAMPSPGPPMGSPLPQMGMRPMGSGTPGPEGERFGTPSPATPSPKP
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcagaggaagaaggacggtgggcccaacgtgaagttttttgagtctgtagag
acgatcgcacagttcgattctgtgcgaacatggctccacaaaaactgcaaaaagtacatt
caagcagaaccgccgacgaacaagaacctggcaagtcttgtagtacagctgctacatttc
caggaggatgcttttgggaagcaagtcagcaacccagccctgacaaaattgcctatgcga
tgcttcttagatttcaaacctggcttggcactgtgccatattttggctgcagtttacaaa
ttcaagagtgaccaaggatggcgtcggtttgacttccagctgccatcacgcatggacagg
aatgttgaaatgttcatgcagatagagaaaagtttggtacagaacaaatgcctaactcta
cctcatatattcataagacctgataatgaccgtgggctgattcccaaactgaaggatatc
atcaagcgtcaccagggcacgattgcagacaatcctgatgatgccactcacatcattcat
cctcttcctgttaacagtaaccctgaagatgagtttttgcgacctgttctaaagagagat
cgccacacaatggtccactggtggtacttccctgacagctatgacacctgggttgcagat
gtgaatatagatcaggatgtggagcccccaaccacacccaatggagcctgggaggtgaat
gccaggtggctgttggatttggaagagtttaatgagtggatgaatgaagaggattacctt
gtggacgaggacagcagcagtgagagcagtggtggaaagaagggcaagcgtagcagtagc
cgggtcaagctcagtcttgatgatataacgcccagcccagactcggacaggagagacaag
aagaaacaaggcaagaggaagcgctccccgtcaccaggtgcagacaaaaagaagagaaaa
agcttgaggagcccagcagttacaggacccaagaagaaatcatggcgagaagaagaagaa
gatttaacaaaagacatggaggatcctaccccagaacctaacatacaagaagtgcagcta
gccaaacaagtacccgggtcacggagtcaaaaagatagtgaggttcagcctgtgaagggt
ggcactatgatggatctggatgaagatcaggaagaaaaggtggagaaggatgaggggaca
gggacaagagagggaacaccagctggggaggaagggaaggaaggggagaagaaagatgag
caggacgacaatgttacagaacagacccatcacatcatcattcccagttactcagcatgg
tttgactataacagtatccacgccatagagaggagggggctgcctgaattcttcaatggc
aagaataaatcaaaaacacctgaaatctacatggcatacaggaattttatgctggacaca
tacagattaaacccccaggagtatctcacaagtacagcatgtcggcgaaacttggcagga
gatgtttgtgcaataatgagagtgcatgcttttctggagcagtggggcttggtgaattac
caggtagatgctgagagcagacccaccccaatggggcctcctccaacttcacattttcac
attctggctgatactccatcaggccttcagccagtcaaccctcccaagacatcacagcca
tctgcagctcagcaggtgatgaatttcacagacaggaacaaagacaaggatggtgacaaa
gagagggaccagaactttgggctgaggacagatatgtatgctaagaaggcccttaaggat
aaaggcgcagccactcggtccagggaatggactgatcaggagacattgttgttgttggaa
gctatggagatgtacaaggatgactggaataaggtgtctgagcacgtgggtagcaggacc
caagatgagtgtatcctacactttctgcgtctacccattgaggacccatacctggaagac
gataatggtcagctgggtcccctgacgtaccaacctgtgcccttctcacagagtggcaat
cctgtcatgtccacggtggccttcctggcctcagtcgttgacccaagggtagccagtgcc
gcagccaagtctgccttggaggagttctcaaagatgaaggaagaggttccgcctgccttg
attgacgcccatgtgcgctcagtggaggcagccatcaacagcgggaagggaggtgacgcc
acattcggactggataagagcggcattgcgggtacaagctctgataaggaagaaggtacc
acaaccacaacagaggagccaaagaaagaggctggggaagaggagaaggaaacaaaagag
gaaaagactgaggagagcatggatactagtgaaaccaagaaggaagaggtggcagaggtg
aaaaaagaagcagacaccgaggaaaacaaggattcagaagaaggcgaaaaagagaagaaa
caggaagaggatggggagaagaaggaggaagaagaagagaagaagcctgaagatgggact
gtatccattgccaagcctaaagatgatggtggtaacattgccactgctgcagcagccgca
cttgctgcagctgctgttaaggccaagcacctagcagctgttgaggagaggaagatcaag
agtctggtcgctctcttggtagagacgcagatgaagaagttagaaatcaaactgagacac
tttgaggagctagaaacaattatggacagggagagagaagctttggagtaccagagacaa
cagctgttacaggagaggcagcagttccacatggaacaaatccgtgcagctgagtaccgc
gcccggcagattgctgctcaacaactggacaaggaacaacgacagcagcagggagatcca
ggagctggaggacctggtggtgcaagtgctgcaagtcagaatccagccctagcagcagct
gtggctcagggttacccctctcatggctcacccatgccaccccagggtccggccacccac
ccccaagctgtcgcacacggctctcccgctcctccgtcagggtcacatcaggccacaccc
atgaacagtggaatgtctagctcagctcccacaccactgggtcagagctcatccatgtca
cccagctaccctaaccaaggcacacccatcagtcatcagaatataggcggccacttcccc
tcctcacattgccagggtttcacaggggtcacccatggtccccccatggccagccacatg
cctgccatgcccagcccagggccccccatgggatcacccctgccacagatgggaatgaga
ccaatgggatcaggtactccaggtcctgaaggggaaaggtttggcacaccttccccagct
acaccctcccctaaaccatag
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