Liolophura japonica (common chiton): 135476121
Help
Entry
135476121 CDS
T09976
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljp03021
]
135476121
03036 Chromosome and associated proteins [BR:
ljp03036
]
135476121
Transcription machinery [BR:
ljp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135476121
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135476121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
S1
SPT6_acidic
Spt6_S1
Tex_YqgF
HHH_9
SH2
HHH_3
S1_RRP5
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
135476121
NCBI-ProteinID:
XP_064612097
LinkDB
All DBs
Position
10:complement(29971284..30013899)
Genome browser
AA seq
1738 aa
AA seq
DB search
MDFMEDEAEVSSGGDISDMDEDDEMNVKKSKKEKKKKKHRISDDDDDDDEEEEDDEELLR
EEMKDLINDDVEEEEEEEEEDNKRKHESDEEDDVMDDEDYDLIEENLGIKVQRKEKKRKR
IKKIIASDDEDSDKEGGQHSPTDDRDVIANELFDDEEEAQERPQPKEDDETHDLDLEASE
EESDVDDFIVDEEGQPISKKAKKKKHIIHSDSALQEAQDIFGVDFDFDEFATYGEEEGEE
EEEDYEDEYIDEEAEGEGAVSRRKSKKSHKKQTKKSIFDVFEPSELERGHLTDVDNEIRI
ADMPERFQLRSTPVQPTEEGELEKEAEWIYKQAFMTMPTSRQNTFDQIDAHGAQYNYYKR
KGPNTVNKIKDAINFMRNQQFEVPFIAFYRKEYVEPELTINDLWKVWYWDEKWTQLETRK
KNMVRLFEKMQNYQFDQNSDPEKVLETNFRALTEDDIDRVKGIQTQEELRDVYQHFLLYY
GADIANMHNAEKLKQRQTVEERGENSEQAPEQEIIKQPARKSGYTICAEAKLGDIAEKFG
LKPEQFGENLRDNYTRHDIEQCPIEPLELAKDYVCSQFPTADDVLKGARHMVAMQIAHEP
LVRQCLRETYYERAKLKVTPTKKGIKEIDENHGCYGMKYLKNKPVKDLKDDDFLKLSMAE
DDHLLTLTLMIDGEDMGTQSYFEEIKQLYYRDEFSHLVEQWNEQRTQALERALKQILYPQ
MQKEIRARLLQEAKEGVVKACCRKLYNWLKVAPYQVDQQLDDDDDEDSSRGLRVMGLAFV
QQRDTAAFCAMIDGDGEVTDYLRLEYMLTRRNAWGRELDIKGKKRDLEKLKEFIASKKPH
VVAVTAESRDATMIMEDVKEVIAELEQEDQMSPISVELVDNEVAQVFQASNRAEADFREY
PPVLRHAVSIARRLQDPLIEFAQLCNPDEDILCLRYHSLQDHVSKEELINGLYLEFVNRV
NEVGVDVNRAIEHPHMAPLVQFICGLGPRKGSHMVKILKQGNTLLENRSQLVTTCHMGPK
VFLNCAGFIKIDTNSLGNSTEVYVEVLDGSRVHPETYEWARKMAVDALEYDDTAEDANPA
GALEEILESPERLKDLDLDAFAEELERQGYGNRHITLYDIRAELNHRYKDLRTPYRSPTN
EEKFHMLTKETPQTFYIGKLVLGRVVGIAHKRPQGDQLDRADPVRDEDTGLWQCPFCRRN
DLPELSDVWSHFDSGSCPGSAIGVRVRLDNGISGFLHVKKISDKHVANPEERVKVGQTLH
CRITKIDTDRFSVDLTSRSSDLIDKELQWKPPRDDYYDADLEMSQIQHEEEKKKQQARQT
YVKRVIAHPSFHNIAYKDCEKLMADMEQGDVIIRPSSKGSDHLTVTWKVTDNVLQHIDVK
EEKKENAFSLGQSLWINKEEFEDLDEIIARHIQPMAAFARDILYFKYFKDSEGGKREILD
KVLIDEKKKAPSRIPYVFSSCKQFPGKFLLGYLPRKKPHYEYVTVNPEGIRYRSQNFHSI
GSLIRWFKEHFRDPVPMSGTPSRTPMMGRTPGARTPNPRTPMPGTGRTPGTSRTPMTSGR
TPQVGGINLQTVDPATIQRAAAGLPSNIYNTLAQVAGATPQQFGNSSNFAGGYSGGYSYR
PASTPMMTPLMTPSYHTSQNVQGTPAHQMAATPSYQPTPRSGWPGATPRTPAAQTPRQHP
SQQTSTAGTDWAKAAAQWAKHRARKPATPRSGQSPRAHPSASPMDSPRGDATPLIDER
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatggaggatgaggctgaggtctcttctggaggagacatctcagacatggat
gaggacgatgaaatgaatgtgaagaagtccaagaaagagaaaaagaagaagaagcacagg
ataagtgatgatgatgatgatgatgacgaggaagaggaggatgatgaagagttgctgcga
gaggagatgaaggacttgatcaatgacgatgtggaggaggaagaagaagaagaggaggag
gataacaaacgaaaacacgagtcagatgaggaagacgatgtcatggacgatgaggactat
gacctgattgaggagaatctcggtatcaaagtacagaggaaggagaagaaaagaaagaga
attaagaagatcatagcatctgacgatgaagacagtgataaggaaggaggtcaacactcg
cccactgatgaccgtgatgtgattgctaacgagctgtttgatgacgaggaggaggctcag
gagaggccacaaccgaaagaggacgatgagacacatgaccttgaccttgaagcttcagag
gaagagtctgatgtagatgattttattgtggatgaggaaggtcaaccaatcagcaagaag
gcaaagaaaaagaaacacatcatacacagtgattctgcactgcaggaagctcaggatatt
tttggagttgactttgactttgatgaatttgccacatatggagaggaagaaggggaggaa
gaggaagaggactatgaggatgagtacatagatgaagaggctgaaggggaaggagccgtt
tcaagacgaaagtcgaagaaatctcacaagaaacagaccaagaaaagtatatttgatgtg
tttgagcctagcgagctggagagaggtcacctgactgatgtggataatgagattcgtata
gcagacatgccagagaggttccagctgcggtccactccagttcaacctacagaagaagga
gagttagagaaggaagctgagtggatttacaaacaagctttcatgaccatgcctacttcc
agacagaacacgtttgaccagattgatgctcatggggcacagtacaactattacaagagg
aagggacccaatactgtcaacaagatcaaagatgccatcaacttcatgaggaaccagcag
tttgaggtgccatttatagcgttctacaggaaggagtatgtagagcctgagctgacaatc
aatgacctatggaaggtctggtactgggatgagaagtggacacagctggagaccaggaag
aagaatatggtgcgtctgtttgaaaaaatgcagaactaccagtttgaccagaactctgat
ccagagaaagtcctggagacaaacttcagagctttgacggaagatgatatcgacagagtg
aagggtatccagacccaggaggaactgagggatgtctatcagcacttcctgctctactat
ggagcagacatagccaacatgcacaatgccgagaaactcaaacaaaggcagacggtcgag
gaaaggggagagaactctgaacaagcacctgagcaggaaatcatcaaacagcccgccagg
aaaagtggatataccatctgtgccgaggccaagctaggtgatatagcagaaaagtttggt
ctgaagccggagcagtttggggagaacctgagagacaactacactcgtcacgacatagaa
cagtgtcccatagagcccctagagctggccaaggactatgtctgcagtcaattcccgaca
gcagacgacgtattgaaaggagcacgtcacatggtggctatgcagattgcccatgagccc
ctcgtcagacagtgtctcagggagacttactatgagcgggccaagctcaaggtcacaccc
actaagaagggcattaaggaaattgatgagaaccatgggtgttacgggatgaagtacttg
aaaaacaaaccagtaaaagatctaaaggatgatgatttcctcaaactctccatggcagaa
gatgaccacctgctaacactgacactgatgatagacggagaggacatgggaactcagtct
tactttgaggagatcaaacagctgtattatagagatgaattcagtcacctagtagagcag
tggaatgagcagagaactcaggctctggagcgagccctcaagcagattctgtacccacag
atgcagaaggagatccgtgcccggctcttacaggaggcgaaggagggcgttgttaaggca
tgttgtcgtaagctgtacaactggctaaaggtggctccgtaccaggttgaccaacagctg
gacgatgatgatgacgaagatagtagtcgtggactgagggtcatgggactggcatttgta
caacagagggacacagctgcgttctgcgctatgatagacggtgatggagaggtgacagat
tacctgcgcctggagtacatgctaacgcgccgtaatgcctggggtcgggaactggacatc
aagggcaagaaacgtgacttagagaagttaaaagagttcattgcttctaagaaacctcat
gttgttgctgtcaccgcagaatccagagatgcgacaatgatcatggaggatgtgaaggag
gtgatagctgagttagagcaggaggatcagatgtccccgatcagtgtggagttagtggac
aacgaggtggcccaggtgttccaggcctccaacagggcagaggctgatttccgggagtac
ccgcctgttctccgtcatgctgtgtcaatagcccgcaggttacaggaccccctgatagag
tttgcccagctgtgtaaccctgatgaggatattctctgtctccgttatcactcactgcag
gatcatgtgagcaaagaagaactgatcaacggtctctaccttgagtttgtgaaccgtgtg
aacgaggtgggggttgacgttaatagagctatagaacacccccacatggccccgctggtg
cagtttatctgtggtctggggcccaggaaaggctcacacatggtcaagatcctgaagcag
ggtaacaccctcctggagaaccgatctcagctggtcaccacctgccacatggggccaaag
gtcttcctcaactgtgcaggcttcatcaagatagacacaaactcattaggcaacagcacg
gaggtgtatgtggaggtgctggatgggtccagggtccacccggagacatacgaatgggcg
cggaagatggctgtggatgccctggagtatgatgacacggctgaagatgctaatcctgcg
ggagcactggaggaaatcctggagagtcctgagaggctgaaggatctggatctggatgct
tttgctgaggagttagagagacagggctatggaaatcggcacatcacactctacgatatc
cgtgcagaactgaatcaccgttacaaagacctgcgaactccttacagatcaccgacaaat
gaagagaagttccacatgttgacaaaagaaacccctcaaacgttctacataggtaagctg
gtgctgggccgagtggtggggattgcccacaaacgcccccagggggatcagttggacagg
gcagaccctgttagggatgaggacacaggactgtggcagtgccccttctgtaggagaaat
gacctgccagaactcagtgatgtatggagtcactttgactctggcagctgtccaggatcg
gccatcggagtccgtgtacggctggataatggcatctctggattcctgcatgtcaaaaag
atcagtgataaacatgtcgccaatcccgaggaaagggttaaggtgggtcagacgctacac
tgccgtattacaaagattgacacagatcgtttcagtgtggatttgacctccaggagctct
gacctcattgacaaagaattacagtggaagcctcccagagatgattactatgacgcagat
ctggagatgagtcagattcagcatgaagaggagaagaagaaacaacaggccagacagacg
tacgtgaagagagtgatagctcacccctcatttcacaacatagcgtacaaggactgtgag
aagctaatggccgacatggagcagggggatgtgatcatcaggcctagcagcaagggctct
gatcatctgacagtcacatggaaggtcacagacaacgtattacagcacatagatgtgaaa
gaagagaaaaaggagaatgccttcagtcttggccagtccctgtggattaataaagaggag
tttgaggatcttgacgagatcatagctcgtcacatccagcccatggctgcctttgccagg
gatatcctctatttcaagtacttcaaggactctgaaggcggaaagagggaaatcctcgat
aaagttctcattgacgagaagaaaaaggctccttcaaggataccatatgtgttcagcagt
tgtaagcaatttcctggaaagtttttgttgggttacctgccacgtaagaagccccactac
gagtacgtcacagtcaaccccgaggggatcagatacagaagccagaacttccactctata
ggctccctcattcgctggtttaaagagcatttcagggaccctgtgccaatgagcggaact
ccttccagaactccaatgatgggtagaacacctggggcccgcacccccaacccaagaaca
cccatgcctggaactggccgcacaccgggcacatccagaacacccatgacaagcgggaga
actcctcaagtaggggggataaatctgcagactgttgacccagcaaccattcagcgagct
gcagcaggtctccctagcaacatttacaacacgttagcacaagtggctggagcgacgcct
cagcagttcggcaactcctcgaacttcgcaggcggttacagcggtggttacagctatagg
cccgcctccactcctatgatgacacccttgatgaccccgtcttaccacaccagtcagaat
gtgcaaggcactcccgcccaccagatggccgccacgccttcctaccagcccacccctcgc
tctggctggcctggggcaacacccaggacaccagcggcccagaccccacgccagcaccca
agccagcagacctccactgctggcaccgactgggcaaaggcagctgctcaatgggccaaa
catcgtgccaggaaacctgccacccctcggtctggacagagtccacgtgctcacccttct
gccagcccaatggactcgcccagaggggatgcgaccccactgattgatgagcggtga
DBGET
integrated database retrieval system
