Liolophura japonica (common chiton): 135476441
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Entry
135476441 CDS
T09976
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135476441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ljp04131
]
135476441
Membrane trafficking [BR:
ljp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135476441
Protein recycling
Other Rab GTPase associated proteins
135476441
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Rsbr_N
NPH3
Cnd1
Motif
Other DBs
NCBI-GeneID:
135476441
NCBI-ProteinID:
XP_064612539
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All DBs
Position
10:complement(17708492..17721759)
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AA seq
588 aa
AA seq
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MATVKKNVKKLHIDESDLLCKNGCGFYGNVAWQGFCSKCYKEVYQKARQAQLQHDTKRQE
ASKKLPTAPGDTTPSFSKFEEKKTQQLNKRSHTVKSIFRKTKDNQQDIPVRKEPTRRTSW
ESQQVSGDFAEFLKTLRKPAAIDVSKQVRGFIEKISQHGDWPIEDLSELVQDFYQSMAER
MQTHSLFKGSAQETVEILMDYMEKFIMTRLYRSVFCPVTTDDEEKDLAIQNKIRSLHWVT
AQQLDTIINDHDPEIRQMVDQAITDIIEMDSRRAPQDKLTCIVHCSKHIFEVLRKSKESP
ASADEFLPALIYIVLKANPPLLQSNINYITRFANPSRLMSGEAGYYFTNLCCAVAFIESL
TAESLNMNPADYERFMSGEAVPAGSGNEYMCEGLKLMYDNLKTLAELRQRQEKVMAEALQ
LQQDMREFKESFKKEILNVLERTPLVVKPRKCKADIDADDPSSEKLPPPMLPLPIALYPQ
TESVDKPVEEDKHTPLLTEGLSSGSVDRESEQPMETMTEPLEGSGPQVEGGFSEDTSAGQ
AMDPHYVPDADNSVPDPNTQQMETESSGSHGNTVFTGNGGGPDIEAVS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtgaagaagaatgtgaagaagctacacattgatgagtcggatcttctgtgt
aaaaatggctgtggattctatggaaatgtggcgtggcagggcttctgttcaaagtgttac
aaggaagtgtatcagaaagctcgacaggcccagctgcagcatgataccaagagacaggaa
gcctccaaaaagttaccaacagctcctggggacacaacaccttcattttccaagtttgag
gagaaaaaaacacagcagttgaacaagcgaagccacactgtgaaatctatcttcagaaaa
accaaagacaaccagcaagacattcctgtgaggaaggagcctactagacgcacaagttgg
gagagccaacaagttagtggagattttgctgagttccttaagactttaaggaagccagca
gctattgatgtgtccaagcaggtgcgaggcttcatcgagaagatatcccagcatggggac
tggccaatcgaggatttgtctgaattggtgcaggatttctaccagagtatggcagagagg
atgcagacacattccctgttcaaagggtctgcacaggagacagtggagattctgatggac
tacatggagaagttcatcatgacgcgtctgtaccgctccgtgttctgtcctgtcaccaca
gatgacgaggagaaggatctggccatacagaacaagatccgcagcctgcactgggtgact
gctcagcagctggacaccatcatcaacgatcacgaccccgaaatcagacagatggttgat
caggcaattacagacatcatagagatggactcacgtcgtgcccctcaggacaaactcacc
tgtattgtacactgtagtaagcacatatttgaagtcttgaggaagtctaaggagagtcca
gccagtgctgatgagtttctgccggccctgatctacatcgtgctgaaggccaacccacca
ctcctacagtcaaacatcaactacattacccgctttgctaaccccagtaggctgatgagt
ggagaggcagggtattacttcaccaacctgtgctgtgctgtggcattcattgaaagccta
acggccgagtcattgaacatgaacccggctgactatgaacgcttcatgtctggtgaggcc
gtgccggctggcagtggcaatgagtatatgtgtgaggggctgaagctgatgtatgacaac
ctcaagaccctcgccgagctgcgacagaggcaggagaaggtgatggcggaggctttacag
ctgcaacaggacatgagggagttcaaggagagtttcaagaaggaaatcctcaacgttctt
gagcgcacacctctcgtcgtcaagcccaggaagtgtaaagcggacattgacgctgatgac
cccagcagtgagaaactgcctcctcccatgctccccctgccgattgccctctacccccag
acagagagtgttgacaagccagttgaggaagacaagcacacgcctttgctaactgaaggc
ttgtcttcaggctcggttgatagagaaagtgaacaacccatggagacgatgacagagcct
ttagaaggctcaggcccccaagttgagggaggatttagtgaagatacatctgctggacag
gctatggacccacattatgtgccagatgctgataattctgttcctgatccaaacacacag
cagatggaaactgaaagctctggtagccatggcaacacagtatttactggtaatggtgga
ggccctgacattgaagcagtaagttaa
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