Liolophura japonica (common chiton): 135476681
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Entry
135476681 CDS
T09976
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
135476681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljp03400
]
135476681
DNA repair and recombination proteins [BR:
ljp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
135476681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
135476681
NCBI-ProteinID:
XP_064612860
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All DBs
Position
10:22742181..22750644
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AA seq
295 aa
AA seq
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MVHEVENFYGVYLLYNVNPKFKGRTYIGFTVDPNRRVKQHNTGKHAGGAWRTSGKGPWEM
VIITHGFPNEISALRFEWAWQNPGKSRRLSHLPGKTRKETAYQYRFRIFSEMLRTGPWNR
LALTVRWLKQEYQLDFSPECPPPLHMAIAYGPVKAVRLKDAPSKRKKKQPDSEESNTEMS
AGEDVTSVSGEMCCICQGGFMCKAEIMRCYRPECHMTAHMVCLSRLFLTGAGAATEDGCC
PLQVIPVGGMCPSCAQELLWGDLIRYKQGCFQAIQEETSSDGHWTNDLQASQDNI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggtccatgaagtggagaatttctacggagtctacctgctgtacaacgtcaacccaaag
ttcaaaggtcgcacctatatcgggtttacggttgaccctaatcgacgtgtcaagcagcac
aacacaggcaagcatgcagggggcgcatggagaacgagtgggaagggaccgtgggagatg
gtgatcatcactcacggttttcccaatgagatctctgccttaagattcgaatgggcctgg
cagaaccctggcaaatctcgcagactatctcatctgccgggcaaaacccgtaaggaaacc
gcctaccagtaccgattccggatattttccgaaatgttacgtacgggtccctggaaccgg
ctggcgctgacggtgcgctggctcaaacaggagtaccagttggatttctcaccagaatgc
cctccccctcttcacatggccattgcgtacggcccagtcaaggccgtcaggctcaaagac
gcaccgtcaaagcgaaagaaaaaacagccagattccgaagagagcaacactgaaatgagc
gcaggtgaagatgtgacttcagttagcggagagatgtgctgcatttgccagggaggcttc
atgtgcaaggcagaaattatgcgctgctacaggccagagtgtcacatgactgcccacatg
gtctgcttgtctcggctgttcctcacgggagcaggagccgccacagaggacggctgttgt
ccactacaggtgatacctgtgggtgggatgtgcccatcctgtgcccaggagctgttatgg
ggagatctcatcagatacaaacagggctgtttccaagccattcaagaggaaacgtcttca
gatggtcactggacaaatgatttgcaggcaagtcaggacaacatatga
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