Liolophura japonica (common chiton): 135476938
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Entry
135476938 CDS
T09976
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135476938
03036 Chromosome and associated proteins [BR:
ljp03036
]
135476938
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135476938
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
135476938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
RRM_occluded
LSM_int_assoc
RRM_7
HAT_Syf1_M
UTP6_C
Nup35_RRM_2
Lsm_interact
RRM_MARF1
NumbF
Motif
Other DBs
NCBI-GeneID:
135476938
NCBI-ProteinID:
XP_064613155
LinkDB
All DBs
Position
10:complement(17533104..17580016)
Genome browser
AA seq
1007 aa
AA seq
DB search
MAGGEIQLMSENENKPTEDEAEKEEEALQADDDVEEESDSNDSADDAETDKRLTELESQV
KENPFMYAGHVELISALREAGELERLRAARETMSTIFPLSEDLWLAWLKDEISMASGESA
EQRAVVERLFERAVQDYLSVPVWLEYVQFSIGGMGHEGGIQRVRDVFERALTAAGLHVTK
GAMIWEAYREFEAAVLAGLMPAAGSVPTKEQEEKFTKQNQRVISLFKRQLSVPLNDMEET
YSEFRQWMSDIEVDQKTAAAYNKARDKLKKIQPFEDALLSAPGLESYQSYIQFELKENDP
ARIQCLFERALQQHCLQPDLWIQYTQYLDRKLRVKQIVMAVYKRAVRNCPWSAALWEKYL
VAMERYGEPWAEIRETLEQALQSGLTEPGDFLLLWTAYCDYLKRRIDWDKDHAVELEDFR
NTIQRAVEHLAEYFGSAGDPRCSLKQFWAFVEARFCKNMEKARELWGSVMAEGHGNEAVM
WLEYLKLERLFGDTKHCRKLLQRALNSASDWPESIVEAFLNFEREEGTFETYDQAVIKCE
AQMERVSERRAVAAEKEALMEDSKKSVKPGKKDIKAKQNQKLSHKSTREETGGQKMKVKP
TRQSQKGMPSEQSEIPELKPYKRKLDGSGDTAGSGSKMSSSTVSEAMAPPDGEPPVKKVK
GPGEAITTQGVRVSVFMCIPGPGEAVATEAVCVSVFMCIPGPSEAIARQAACVNVFMCIP
GAGEAIATQAVPHDASKEHRTVFISNLLYSIDEERLREIFSQCGEITEVRLPKNFKGKSK
GFGYVEFRTEDSVSAALRMDRKDVEGRPMYVSPSIDRSKQPATFRFSTDLEKNKLFVRGL
PFTCSKEALENIFGQHGKLRSVRLVTHKSGAPKGLAYIEFENETEAAQAVLKTDGLQIGD
HTISVAISNPPDRRAPLKTRAETFVPSLGGGKKESEIRGKARTQLSLVPRAVQKKPPPGY
TPAPKTNAPDAQSKDRQNGAGQTTAKDQTIPSQKMSNSDFRNMLLKK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggtgaaattcagttgatgtcggaaaacgagaataaacccacagaagatgaa
gcagaaaaagaggaagaagcactgcaggctgacgacgatgtggaagaggaatcagactcc
aatgacagtgctgatgatgccgaaactgacaagagactaacagagttggaatcacaagta
aaggaaaatccattcatgtacgctggacatgtggagctgatttctgccttgcgtgaagct
ggtgagctggagagattgagagctgcccgagaaaccatgagcaccatattcccactttca
gaggatctgtggctggcatggctgaaggatgagatcagcatggcgtctggagaaagcgca
gaacagagagcagttgtggaacgtctatttgagagagctgtacaggattatctgtctgtt
cctgtgtggttggagtacgtgcagttttctattggtggaatgggacatgaaggagggatt
caacgtgtccgtgatgtgtttgagagggcgctgacagctgccggacttcacgtgacaaag
ggtgcgatgatttgggaggcgtatcgcgagtttgaggctgcagtgctggcaggtttgatg
cctgcagccgggtctgtgcccaccaaggaacaagaggagaagtttaccaagcaaaaccag
agagttatttcccttttcaagagacaactgtctgtcccgttaaacgacatggaggagact
tactctgaatttcgacagtggatgtcagacattgaagtagatcagaaaacagcagcggcc
tacaacaaggccagggacaaactgaagaagattcagccatttgaagacgcattgttgtct
gcccctggcctggagagctatcagtcctacatacagtttgaactgaaggagaatgaccca
gcgaggatccagtgtttgtttgagagagccttacagcagcactgtctgcagcctgacctc
tggatacagtacacacagtatctggatagaaagttaagggtgaagcagattgtgatggct
gtatataagagagctgtaagaaactgtccctggtcagcagcactctgggagaagtatctg
gttgccatggagagatatggagaaccttgggcagagatcagagagactctggagcaagcg
ttacagtctggccttactgaaccaggggacttcctgcttctgtggacagcctactgtgac
tacctaaagcgcaggattgactgggacaaagaccatgctgtggagttggaggacttcaga
aacactatacagagagctgttgaacatttggcagaatactttggctcagccggtgatcca
agatgttccctgaagcagttctgggcctttgttgaggcaaggttttgtaaaaatatggag
aaggcacgagaactgtggggatctgtaatggcggaaggacacggtaatgaggcagtgatg
tggcttgaatacctaaagctagaaaggctctttggagacacaaagcattgtcggaagttg
ttacagcgagccctgaactcagccagtgattggccagaaagtattgtcgaggctttccta
aattttgagagggaagaagggacgtttgagacatacgatcaagcagtcataaaatgtgaa
gctcagatggagagagtctctgaaagacgagccgtggcagctgaaaaagaagcgttgatg
gaagactctaagaaatctgtgaaaccaggaaaaaaagacatcaaggcaaagcaaaaccaa
aagctttctcataaatctacaagagaggagactggagggcagaaaatgaaagtaaaacct
accaggcaaagccagaagggtatgccctctgagcaatcagagattcccgagctaaaaccc
tacaaacgtaagttggatggctctggagatacagcaggttccggatccaaaatgtcttcc
agcaccgtctcagaagccatggcaccaccagatggggaacctcctgtaaagaaagttaaa
ggtcccggtgaagcaataaccacacaaggtgtccgtgtaagtgtatttatgtgtattcca
ggtcccggtgaagcagtagcaacagaagctgtctgtgtaagtgtatttatgtgtattcca
ggtcccagtgaagcaatagccagacaagctgcctgtgtaaatgtatttatgtgtattcca
ggtgccggtgaagcaatagccacacaagctgtgccacatgatgcatcaaaggaacatcgc
actgtgtttatcagcaacctgctgtactccatagatgaggagagactaagagagattttc
agccagtgtggtgaaataacagaagtgcgattgcccaaaaacttcaaagggaagtcaaaa
ggatttggctatgttgaattcagaacagaggattcggtgtcggcagcattgcgcatggac
cgtaaggatgtggagggcaggcctatgtatgtgtccccatccattgacagatccaaacag
cctgcaacattccggttttcaacagatttggagaagaataaactgtttgttagaggtctt
ccatttacctgttccaaagaggccttggagaacatcttcggtcagcatggaaaactgaga
tctgtcaggcttgtgacacacaagagtggagcacccaagggactggcttacattgaattt
gaaaatgagacagaggctgctcaggctgtgctgaagacagacggcctacagataggggac
cacaccatctctgtcgccatcagtaacccgcctgacaggagggcaccactcaaaaccagg
gcagagacctttgtcccctcactcggaggtggcaaaaaggaatcagaaatacggggtaag
gctcgtacacagttgtccctggtcccccgggctgtccagaagaagcctcccccggggtat
actcctgccccgaagaccaacgctcctgatgcccagtctaaggatagacagaatggagca
ggccagacaacagccaaagaccagactatcccctcccagaaaatgagcaattcagacttt
cgcaacatgttgttaaagaagtga
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