Liolophura japonica (common chiton): 135478985
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Entry
135478985 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ljp01002
]
135478985
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ljp04121
]
135478985
Enzymes [BR:
ljp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135478985
Peptidases and inhibitors [BR:
ljp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135478985
Ubiquitin system [BR:
ljp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135478985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
DUF3928
DUF1072
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
135478985
NCBI-ProteinID:
XP_064614745
LinkDB
All DBs
Position
12:3696337..3748328
Genome browser
AA seq
2585 aa
AA seq
DB search
MTIAMQRAPAGGESPPDNHQQPPLQPGQPTAQPNPQGQQQQQQQQQQQLPGAQNPPAEGT
VQVPVGQAAEAGQGDGSIDMSDDQEPDFPHAELAKLDEMINRPRWVVPVLPKGELEVLLE
AAIDLSKRELDTRSEACQRFFREGLTTSFTKVLTDEAVNGWKYDIHKYILRNAEKLVELC
VAKLAYDWFPLLELLAMVFNPQCKFHVYNGTRPSETVPANSQLADDELFARPPDHRTPRG
WLVDLVNRFGDLDGFQILLDRFLQGPQLSVPVIAALIKPFGQCAEVLTPHTIQKYFMPIV
EIVPEFLDSLTDEELKKESKTEAKNDALSSIVKALKQLVARVPNQEETVKSLEIFRLKMI
LRLLQISSFNGKMNALNEVNKVIANVSFHASRQIEEDEWLTAVKMAEWIQENNVLSIVLR
DSLHQPQYVEKLEKILRFMIKEKALSLQDLDKLWEAQSGKHEAIVKNVHDLLAKLAWDFS
PEQLDHLFDCFQGSWANASKKQREKLLELIRRLAEDDKEGIMAHKVLGLLWNLAHSEDVP
TDIMDQALSAHIKILDYSCSQDRDAQKIQWINKFVEELKNDKWVLPSLKQIREICQLFQE
APQNFPHTQRTPHVVYRNHVISQLQSQHAIVMLVAQNLAGYMNKARIFAKDHVDSEPNNI
LPDGRFNHVQQVQERLRFLRFLLKDGQLWLCEPQARQIWNCLAENAIYITDRESCFKWFA
KLMGEEPDLDPEITKDFFESNILQLDPSLLTENGMNCFERFFRHVNVKESKLTTKRRGGH
VMNDLELIGMEYLWRVVLWSPDEVSGKAIALLKDTYTNLGPRLQSSQVDIHEDFIGTCVD
RLKASYDTISILDKEKDSTNRVMQEATRMVRVITVLKEYVAECDDAYGEERSILPLSRAC
RGKLVTLIVRFPSQGRQLEDLDVWSHTNDTIGSVRRQILHRVKANNVNIKVDLYINGELL
DPSEDKRLILQMQLRDKTMITAKLVQVGSNMPSSPDSSSDSSAGSPHNAYDGPNSEAESS
LPGVLMSMNQRYAQFLFQLSDLGCRLLLPKLRDTARQLLKLMPADKNIVDKLRNICSESL
KSDSSSTTLESLFFGPSPTQVLYTLEVSYSMLMPAQDPLSDDAFDFQYNFVRAGGISLAL
NMLTKNNFLPTADLPTRRTAYVTVLKICKLMLTTVGHAKVQVVAEACHADSQGPPITAFE
HNHAVILQQALHSIPNPSAEFTTRNVAMRLGQQLGDQATGVVPNLDTVKAVQKIAWSASS
GSLHLVHASNEDIHKAFEKVKQTQEGEDMSVAREAMEVLTICLALCPSALEALNNNNKAW
QCFIVDLLLLCKNRMVRMAATEQFFLVATKCSSGDRPLIFFILLLFTVLTNTAVENPKQS
QEYFQLLCRLLNYACASETRLPNAEVLLNNEITWLKKIRDQVLTSSDNQIEEAILEGHLG
LTRELLSFQSSEKKFHNGSEKGGANLIKELVEDFIFPASKIVLQCRKLNGELPSENAVPV
CATPMTVIAAFDLLVSLCTGCVQNLKCLANMLIDMYYRDESPLTEWEYLPPIGPRPYRGF
VGLKNAGATCYMNSVLQQLFMIEPIRIGILAVDGAADDIEEDYIDDKAENEINVDLGEEE
RKDEEKPVISKVEERKDYNMGVLKQIQVIFGHLANSKLQYHVPRGFWKHFKLWGEPVNLR
EQHDALEFFNSLVDSLDEALKALGQPTILSKVLGGSFADQKICKDCPHRYQREESFTTLN
VDIRNHQNLLESLEQYVKGDLLEGANAYYCEKCDKKVDTVKRLVIKKLPKIMAIQLKRFD
YDWERECAIKFNDYFEFPREFDMEPYTVHGLAKIEGEIIDDDVNVKCTSTKFRLTGVVVH
SGQASGGHYYSYILHKPPGEPVAKWQKFDDGEVTECKMDDEEEMKNQCFGGEYVGEVFDH
MLKRMSYRRQKRWWNAYILFYERIDEEDPVEDVNKAVQDLSIVPKSSSLKMPCTIERCVR
KQNILFMHDKNQFSVEYFQFMRKLLLCNAQYVSLQSAQDKLSVEAEDLAMISVQLGSKFL
FNVGFHTKKTLRGPANEWYDALSIHLRYSKTVRSWFAHNVLFEPPGRFGEYLLECPSSEV
RSAFAKMIVFVAHFSLPDGQCPPPLISAGQSTESSATLSDHLLLAVLNLLKKEVSEHGRH
LQQYFHLFLMYASLGVAEKVELLKLNVPHMFMLVALDEGPGPPIKYQYAELNKLYSVVSL
LVRCCDVSSRCRSSVNGQPPMPNPHGDQQCTQYLMPIQSQVAEILFSRTSYVKKLIEDCN
NSEDTTKLLRFCSWENPHFSSTVLSELLWQVAYSYTYELRPYLDLLLQMLLLDDSWQNHR
IHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKMMVTLFTHCIPAAQMLQTNGDLKRK
WTWAVEWLNDELERRQYPGNTQYTYNNWSPPAQSNETSNGYFLERSHSAKMTLTKAYELC
PEEEAEDGELTDEQDSSPQPEDSVPGYSQSPSSSSQNGQPRNSGGGGGGGGSSSGGSGGG
SGQVQNNQVTMPATHQPVQPTNQINNQLNQAEPKSRLELLQPQNSPPLDTDTCEEESSNK
GTNSD
NT seq
7758 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgctatgcagcgtgcgccagcgggaggggaatccccgccagacaaccaccaa
cagcctcccctgcaacccggtcagcccacagctcagcccaacccacagggacaacaacaa
cagcagcagcagcaacagcagcagttaccgggtgctcagaaccctcctgctgagggcact
gtccaggtacccgtgggtcaggcggcagaggcggggcagggggacggcagtatagacatg
agtgatgaccaggaaccagacttcccccacgccgagctggccaagctggacgagatgatc
aaccgaccgcgctgggtcgtgcccgtgttgcccaaaggagagctggaagtgctactggaa
gctgctatagacctcagcaagagagaattggacacaaggagtgaagcatgccagagattt
ttcagagaaggtttgaccacatcatttaccaaagtgctgacagatgaagcagtcaatggc
tggaagtatgatatccataaatacattttacgcaacgctgagaagctggtagagctttgt
gtagctaagctggcttacgactggtttcccttgttagagttattggccatggtattcaat
ccacagtgcaagttccatgtgtacaatggcacccgaccctcggagactgtccctgccaac
tcccagctggctgatgatgaactgtttgccagacccccagatcacagaaccccacggggt
tggttggtagatcttgtgaatcggtttggagacttggatggttttcagatattgctggac
aggttccttcagggcccacaactctctgttccagtcatagctgctcttatcaagccattt
ggacagtgtgctgaagttctaacgcctcataccatacagaaatacttcatgcctatcgtg
gaaattgtaccagagtttttagattctttgactgatgaggagctgaagaaagagtcgaaa
acggaagcgaagaatgatgccctgtcaagtattgtgaaggccttgaaacagctggtagcc
agggttccgaaccaggaggagactgtgaaaagtttggagatcttccgcctcaaaatgatc
ctaaggcttctacaaatttcctctttcaatggcaagatgaatgccctgaatgaggtgaac
aaggtaatagccaacgtctcattccacgccagtagacagattgaggaagatgagtggttg
acagctgttaaaatggcggagtggatccaggaaaacaatgtgctgtcgatcgtgttgcga
gacagcctgcaccagcctcagtatgtggagaagttagagaagattctcaggtttatgatc
aaagagaaagctctcagtctacaggatctggataaactatgggaagctcagtctggcaaa
catgaagccattgtgaagaatgttcatgacttgttagcaaagttagcctgggacttttcc
ccagagcagcttgatcatctctttgactgtttccagggaagttgggcaaatgcaagtaaa
aaacagagggagaaactgttggagctgatcaggagacttgcagaggatgacaaggaaggc
attatggcacacaaggtgttgggcttattatggaacttggcccacagtgaggacgtaccc
acagatatcatggatcaggccctcagtgctcatatcaagattttagattacagttgttct
caggatcgagatgctcagaaaatccagtggataaacaagtttgtggaagaactgaagaat
gacaaatgggttctaccatctctaaaacagattagagagatctgtcaattgtttcaagag
gcccctcagaacttcccacacacccagaggactccccatgtggtgtatagaaatcatgta
ataagtcagcttcagtctcagcatgcaattgtcatgctggtggcacagaatttggctggt
tacatgaacaaagccaggatctttgccaaagatcatgtggactcggagcccaacaacatt
ttacctgacggcaggtttaaccatgttcagcaggtgcaggagcgactgcgcttcctcagg
ttcttgttaaaagatggtcagttgtggctatgtgaacctcaggccagacagatatggaat
tgcctggctgaaaatgctatctacatcacagatagagaatcgtgttttaaatggtttgca
aagctcatgggagaagagccagatttggatccagaaatcactaaggacttttttgaaagc
aacatccttcagctagatccgtcacttttgactgaaaatggcatgaactgctttgagagg
tttttccgacatgtaaatgtcaaggaatccaagctgacaacaaaaaggcgtggaggacat
gtgatgaatgatttggagctgattggcatggagtatttatggagggttgtgttgtggagt
ccagatgaagtatcagggaaggccatagcattactgaaagacacttatactaatctgggt
ccaagattgcaatctagtcaggttgatatccatgaggattttattggcacttgtgtggat
cgattaaaagcctcatacgacacaatcagcatcctggacaaggaaaaagacagtacaaac
cgtgtgatgcaggaggcgactaggatggtgcgcgtgatcaccgtcctgaaggagtatgtc
gctgagtgtgatgacgcgtatggtgaggagaggtccatcctgccactgagcagggcttgt
cgtggtaagctggtcacgctcattgtgcggttcccaagtcaaggaagacaactggaggat
ctggacgtctggtcacatacaaatgacactatcggttctgtccgaagacagattctacat
cgggtcaaagccaacaatgttaacatcaaagtagatctctacatcaatggagagctgtta
gatccaagcgaagataaaagacttatattacagatgcagctgagggataaaacgatgatc
acagccaaattggtgcaggtgggcagtaacatgccatctagtccagacagtagctctgac
agctcagcagggtcccctcacaatgcctacgatggaccgaatagcgaagctgagagttct
ctgcctggagtgctgatgtctatgaatcaacggtatgcccagtttctgtttcaactgtct
gacttgggctgtcgtctgttgttgccaaagctccgtgatacagcccgacagctgctcaag
ttgatgcctgcagacaagaacattgtggacaaattacgcaacatctgctcagaatccctc
aagtctgattccagctcaacaacattagaaagtctcttctttggtccatcacctacacaa
gttctgtacacattagaggtgtcgtacagtatgttaatgccggcccaagacccactgtca
gatgatgccttcgactttcagtataactttgttcgagcaggagggatttcgctagccctg
aacatgttgacaaagaacaactttttaccaacagcagacttgcctacaagacgaactgcc
tatgtgaccgtgttaaagatctgcaaactcatgctgacgacagtggggcatgctaaggta
caagtggtggctgaggcgtgtcatgcggattcccagggtccacccatcacagcgtttgag
cacaatcacgcagtgatcctccagcaggctctacacagcatccctaaccctagcgctgag
ttcacaacaagaaacgtggccatgaggctgggacagcagctcggagatcaggctacaggt
gtagtgcctaacctggacacagttaaggctgtacagaagatagcctggtcagccagcagt
ggctctctacatctggtccatgcctctaatgaggatattcacaaagcatttgaaaaggtc
aagcaaacccaggagggtgaggacatgtcagtggccagagaagccatggaggtactgacc
atctgcttagccctctgcccttcagccctagaagccctcaacaacaacaacaaggcctgg
cagtgcttcatagtcgacttgctcctactctgtaaaaatagaatggtgagaatggctgcc
acagaacagtttttccttgtggccaccaagtgtagttctggagacagacctcttatcttc
tttatccttcttctctttaccgttttaacgaatacagctgtagaaaatccaaagcaatcc
caggagtattttcagcttctgtgtaggttattaaattatgcttgtgccagtgaaacccgg
cttcccaatgctgaggttctcctcaacaatgagatcacatggttgaagaaaatcagggat
caggtgctgacatcaagtgataaccagattgaggaggccatcctggagggacatctgggc
cttactcgagaactgctatcattccagtcctcagagaaaaagttccacaacggatcggag
aaagggggtgcaaatctgatcaaggagctagtagaggacttcatatttccggcatcaaag
attgttcttcagtgccgcaaattgaatggggagttgccttctgagaacgctgttccagtg
tgtgcgactcctatgactgtgatagctgcctttgacctcctggtctccctgtgtacgggc
tgtgtgcaaaacctgaagtgtctggctaacatgctgatagacatgtactacagagatgag
tctccgctaacagagtgggagtaccttcccccaattggtcctcgcccgtacagagggttt
gtggggctgaagaacgcaggagccacgtgttacatgaactcagtcttacaacagttgttc
atgattgaacctatccgtattgggatactagccgtggacggggcggccgatgacatcgag
gaggactacattgatgataaagccgagaatgagatcaatgtggacctgggtgaagaggag
agaaaagatgaagaaaagcctgtgatatccaaagtggaggagaggaaagattataacatg
ggagtgctcaaacagatacaagtcatctttggtcacctggccaacagcaaactacagtac
catgtgcccaggggcttctggaaacatttcaaattatggggagagcctgtaaatttacga
gaacagcatgatgccctggaattcttcaacagcctggtggacagcctggatgaagctctt
aaagcactaggccagcccaccattctgtctaaagttttaggaggatcatttgctgaccag
aaaatctgtaaagattgtccccataggtatcagagagaggagtcgttcacgactctgaat
gttgacatccgtaaccatcagaatctcctggagtcactggagcagtacgtcaagggagac
ctgctggaaggggcgaatgcttactactgtgagaagtgtgacaagaaggttgatactgtg
aagagattagtgataaagaaacttcccaaaataatggccattcagctgaagagatttgac
tacgattgggaaagagaatgtgcaatcaagtttaacgactactttgagttccctcgggaa
tttgatatggagccatatacagtgcatggacttgccaaaatagagggggagataatcgac
gatgacgtgaatgtaaagtgcacaagcacaaagttccgattgacgggtgtcgtggttcac
agcgggcaggccagtggcggacattactactcatacatcttacacaaaccaccaggagag
cctgtggctaaatggcagaagtttgatgatggagaggtgacagagtgcaagatggatgac
gaggaggagatgaaaaaccagtgctttggcggggagtatgtaggggaagtgtttgaccac
atgttaaagaggatgtcctaccggcgccagaagaggtggtggaatgcatacatcctgttt
tatgagaggatagatgaagaagaccctgtggaggatgtgaataaggctgtacaggatctt
tccatagtgccaaaaagcagcagtctcaaaatgccatgtacgatcgagagatgtgtgagg
aaacagaacatactgttcatgcatgacaagaaccagttttctgtggagtattttcagttc
atgaggaagttgttgttgtgcaacgcccagtatgtcagcttgcagagcgcacaggataaa
ctgtctgtggaagcagaagacctggctatgattagcgtccagctgggctcaaaattcctg
ttcaatgtgggatttcacacaaagaaaaccttaagaggcccagccaacgagtggtacgac
gccctcagtatccacctccgctacagcaagacagtgcgcagctggtttgcccacaatgtt
ctgtttgagcctccagggaggtttggagagtacctgttggagtgtcccagctcagaggtc
agaagtgcctttgctaagatgatcgtgttcgtggcccacttctccctgccggatggtcag
tgtccacctcccctcatctcagcaggtcaaagcaccgaatctagtgccaccctctctgat
catttgctactggctgtgctgaatctgctaaagaaggaagtctcggagcatggccggcat
ctgcagcagtatttccacctcttcctgatgtatgccagtctcggcgtggcagagaaagtg
gaactcctgaagttaaatgtgccgcacatgttcatgttggtggcgctagacgagggacct
ggtccaccaatcaaataccagtatgcagagctcaacaagctgtactcagttgtctccctt
ctcgtgcgttgctgtgatgtgtcctcacgttgtcggtcgtctgtaaacggccaacctccg
atgcccaacccccacggtgaccaacagtgtactcagtacctgatgcccatacagagccaa
gtggcagaaatcctctttagcagaaccagctatgtgaagaagttgatagaagactgtaac
aactctgaagacaccaccaagttgttacggttctgcagttgggaaaatccccatttctcc
tcgacagtgttgagtgaactcttatggcaggtggcgtattcatacacctacgagctgagg
ccctacctggacctgttgttacaaatgctgctattggacgactcctggcagaatcatagg
atacacaacgctctcaaaggaatccctgatgacagagatggactgtttgacactatccag
aggtcaaaaaaccactaccagaaacgagcataccagtgtattaagatgatggtgaccttg
tttacacactgtataccagcagcccaaatgttacagaccaacggagatctgaagaggaag
tggacctgggccgtggagtggctcaatgatgagttggagaggagacagtacccaggtaac
acccagtacacttacaacaactggtcacccccggcccagtccaatgagacgtcaaatggg
tatttcctggaaaggtcacacagtgctaagatgacgctcaccaaagcttatgagctctgc
ccagaagaggaggctgaggacggagagttgacagatgaacaggacagcagtccgcagccc
gaggacagcgtccctggctacagccaatcaccttcctcctcctcacagaacggtcagcca
cgcaacagtgggggcggaggaggcggtggtggtagtagtagtggcggcagcggtggtggc
agtgggcaggtccagaacaatcaggtgaccatgccagctactcaccagccagtccagcca
accaatcagatcaacaaccagctgaaccaggcggagcccaagtcacgcctcgagctgctc
cagccgcagaactctccacctctggatacagacacctgcgaagaggagagcagcaacaag
ggaactaactctgactga
DBGET
integrated database retrieval system
