Liolophura japonica (common chiton): 135479009
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Entry
135479009 CDS
T09976
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135479009
03041 Spliceosome [BR:
ljp03041
]
135479009
03036 Chromosome and associated proteins [BR:
ljp03036
]
135479009
Enzymes [BR:
ljp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135479009
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135479009
mRNA cycle factors
Common to processing body (P body) and stress granule
135479009
Spliceosome [BR:
ljp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135479009
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135479009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
135479009
NCBI-ProteinID:
XP_064614777
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All DBs
Position
12:21628592..21650824
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AA seq
752 aa
AA seq
DB search
MSAMPNDSTQNGKGLEQQFAGLDLNAGGRVSRGRGDYHQGYQRNNYQGQPQGQRYVPPHM
RSQAGGPPPQPDLTGYPRGPGRGWFPAEWLPTPDAYRGGYGGGGGRGGFPPQFNGMLPPG
YNPQAMPPGPPPNQGSYQPYNNRGGAPGGYNNYRGGRGGGGQYRGNNRSYDNNRWGGNDG
QRWNDNRSQGGSRWDNLDDDRDMRRGGGGGGGGGWGGSNRWDRNDRGWKDEPVANDVDWS
VPLQRNERMEQDLFGGGNTGINFDKYEDIPVEASGDNCPEHIDDFHQLNSLGEIIRNNII
LSKYEKPTPVQKYAIPIVLGKRDLMACAQTGSGKTAAFLVPILNQIYENGPPDVQNQGRT
SGRRKQFPLALVLAPTRELASQIYDEARKFAYRSHVRPSVVYGGADIGGQMRDLDRGCHL
LVATPGRLVDMIERGKIGLDHCKYLVLDEADRMLDMGFEPQIRRIVEKDTMPPCGKRQTL
MFSATFPKEIQILARDFLDNYIFLAVGRVGSTSENITQKVVWVEESEKRSFLLDLLNASG
PESLTLVFVETKKGADALEHFLAGEGYPATSIHGDRSQREREDALRSFRTGMTPILVATA
VAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNKNVVRDLLEL
LVEAKQEVPSWLESMAYEARHSSGPNRRGGARRFGGSGFGARDYRQNTRGAKHGGMAQPY
GSMPYNNFTQYQNYGGSYGGAYTQQPVDWFGN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctatgcctaatgattccactcagaatggaaagggtctagaacagcagtttgct
gggctagacttgaatgccggagggcgtgtcagccggggtcggggtgactatcaccaaggc
taccagagaaacaattaccaaggccaaccccaaggacagcgctatgtgcctccacacatg
cgaagccaagctggtgggcccccaccgcagccggacctgacgggctaccctagggggccg
ggaagaggttggttccccgcagaatggctgcccacgccagatgcttaccgtggtggttac
ggaggtggaggtggacggggaggattcccaccacagttcaatggaatgcttcctcctgga
tacaacccacaagccatgcctccaggaccaccccctaaccagggttcctatcagccgtac
aacaaccgtggaggagcccctggtggttacaacaactacagaggcggccgtggtggtggc
ggacagtaccggggaaacaatcgctcttatgacaacaaccgctggggcggaaatgatgga
cagcgctggaacgacaaccgctcccagggaggaagccgctgggacaacctagatgatgac
agagacatgcgtcgtggcggcggcgggggtggtggaggaggttggggtggcagcaaccgc
tgggacaggaacgaccgtggttggaaggatgagcctgtagctaacgatgtggactggtca
gtgcccctgcagcgaaacgagagaatggaacaagacctgtttggaggcggtaacaccggc
attaactttgacaaatatgaggacatccctgtggaggcttctggagataactgccctgaa
catattgatgatttccaccagctgaactctttgggagaaatcattcgcaacaatattatc
ctgagcaagtacgagaagccaacaccagtacagaagtacgctattcccattgtgctgggc
aagagggacttgatggcctgcgcccaaacaggttctggtaaaactgcagctttccttgtc
ccaatcctgaaccagatctatgaaaatggcccccctgatgtgcagaaccagggtcgcacg
tctggtcggcgtaagcagtttcctctggctcttgttttggcccccacccgagaacttgcc
tcgcagatctatgatgaagccagaaagtttgcgtaccggtcccatgttcggccgagcgtg
gtgtatggcggagcagacatcggaggtcagatgcgtgaccttgatcggggatgtcatctg
ctggttgccacaccaggccgacttgtggacatgattgagaggggaaagattggactcgac
cactgcaagtatttggtgttggatgaggccgatcgtatgttggacatgggatttgagcca
cagatccgccgcatcgtagagaaggacaccatgccgccctgtggaaagcgacaaaccctc
atgttcagcgccaccttccccaaggaaatccagatcctggctcgtgacttcctggataac
tacatctttctggcggttggccgtgtaggcagcacaagcgagaacatcacccagaaagtg
gtgtgggtggaagagagtgagaaacgctccttcctgctcgatcttctcaatgcctctggc
ccagagtccttaactctggtgtttgtggaaaccaagaaaggcgccgatgccctcgagcac
ttcctggctggtgaaggatacccagcgaccagtatccatggcgaccgttcccagcgcgag
agagaggatgctcttcgctcgttcagaactgggatgaccccaatcctggtggctacagct
gtggctgcccgaggtctggatatcagtaatgtgcgtcatgtcatcaactttgatcttccc
agtgacattgaggagtacgtccaccgaatcggcagaactggacgcgtgggcaatcttggt
cttgcaacatctttcttcaacgagaagaacaagaacgtggtgcgtgacctgctagagctg
ctagtagaggccaaacaggaagtgccgtcttggctggaatctatggcatacgaggctcgc
cactcgagtggaccaaaccgccgaggtggtgcaagacgatttggaggatctggatttgga
gctcgtgattatcggcagaacactcgaggagctaagcacggtggaatggcccaaccttac
ggctccatgccctacaacaacttcacccagtaccagaactatggtggctcgtacggtggc
gcctacacccagcagccggtcgactggtttgggaactaa
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