Liolophura japonica (common chiton): 135479022
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Entry
135479022 CDS
T09976
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135479022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135479022
Spliceosome [BR:
ljp03041
]
Common components
Common spliceosomal components
SR proteins
135479022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135479022
NCBI-ProteinID:
XP_064614795
LinkDB
All DBs
Position
12:complement(19288491..19289734)
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AA seq
293 aa
AA seq
DB search
MGTRVYIGRLSYHTREKDVERFFRNYGKIRDLMLKNGYGFVEFDDYRDADDAVYELNGKE
LCGERVVVEHARGRGMSRGDEYRRERDWGFPPRRRGGRGRDKYGPPSRTDFRVIVENLSS
GVSWQNLKDYVRQGGEVTYADAHKQRRNEGIVEFATYKDMKNAIDKLDDTELNGRRIRLV
EDKPSRKRRSSDSRSRSRSRSRSRSRSRRSRSRSRSKSRSRSRSASRSPSRGRDRDHDRK
GSRSVSKSKSKSRSKSRSRSRSKSKSRSRSKSATPEKNGSPERHEDVKQEEQD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgagggtgtacatcgggcgattgtcgtaccataccagggagaaggatgtcgaa
aggtttttcaggaactatggtaaaatccgtgatttgatgttgaaaaacggttatggattt
gttgagtttgacgattacagagacgccgacgacgcggtttatgagctcaatgggaaagag
ctttgtggcgagagggttgtagtggagcatgccaggggacgagggatgtccaggggcgac
gaatatcgacgagagagagattggggcttcccacctcgtcgacgaggtggtcgaggcagg
gacaagtatggtccaccgagcagaacagatttccgagtgattgttgaaaatttgtcatct
ggcgtgagttggcagaatctcaaggactatgtacgccaggggggagaagtcacgtacgct
gacgctcacaaacagcgtcgtaacgaaggtattgttgaatttgctacttacaaggatatg
aaaaatgcaattgacaaacttgatgatactgaattaaatggtagacgaattcgtctggtc
gaggacaaaccatctagaaaacgcaggagcagtgacagccgcagcagatcgcgcagccga
agtcggtccaggtccaggtccagacgtagcagaagcagaagccgcagcaagagtcgaagc
cggagtagaagtgcgagccgtagcccaagtcgaggccgagatcgagatcatgaccgaaag
ggcagccgttctgtgtcgaaatccaaatccaaatccaggagtaaatcaagaagccgaagt
cgatccaagtccaagtcgagatctcgttccaagtctgcaaccccagagaagaacggttcc
ccagaaagacatgaggacgttaaacaggaagagcaagactga
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integrated database retrieval system
