Liolophura japonica (common chiton): 135479095
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Entry
135479095 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4A-like
KO
K10609
cullin 4
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03420
Nucleotide excision repair
ljp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135479095
09124 Replication and repair
03420 Nucleotide excision repair
135479095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ljp04121
]
135479095
03400 DNA repair and recombination proteins [BR:
ljp03400
]
135479095
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ljp04147
]
135479095
Ubiquitin system [BR:
ljp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
135479095
DNA repair and recombination proteins [BR:
ljp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
135479095
TCR (transcription coupled repair) factors
Cul4-CSA complex
135479095
Exosome [BR:
ljp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135479095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
135479095
NCBI-ProteinID:
XP_064614887
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All DBs
Position
12:11735276..11762980
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AA seq
812 aa
AA seq
DB search
MPLSKVHKAPILDSSTREENPLSRKRKFSENYIFASTSKRAREHLENESQTTTTMTDAPK
RANFSALNPSNGIARHASPLSNNKSGAIKKLVIKNFKEKPKLPVNFQQETLEKLKEAVEA
IHTSHSIKSSLEELYKAVENMCSHKMSAMLYDELKKICENFVKSNLEQFLGDTTHYEQYL
KLMDSCWQAHCRQMIMIRSIFLYLDRTYVLQNNSVLSIWEMGLDLFRQHIISHNTVQLRT
VDGLLLLIEKERNGEAVDRHLLKSLLRMLSDLQIYQSAFEKKFLEATDRLYAAEGRRLMQ
ERDVPEYLTHVDKRLNEETERLLHYLDQSTRKPLIAIVEKQLLEQHLSSILGKGLDQLLD
ENRVTDISLLFQLFVRVKDGIKELCSAFATYIKLTGRMVVVNTDSDPEKDKDMVQKLLDF
KDKIDNIISVCLGRNEKFINSMKESFEHFINQRQNKPAELIAKYVDSKLRAGNKEATEEE
LERLLDKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGAGFT
SKLEGMFKDMELSKDIMLAFKQHMMNLDAPGGIDLTVNILTMGYWPTYPPMEVHLPTEMV
QYQEIFKKFYLSKHSGRKLQWQPTLGHCVLKAEFRDEVKKELQVSLFQTLVLLLFNDAVE
FVYEDIKQATSIEEGELKRTLQSLACGKARVLLKVPKGKDIEDGDKFTFNEDFKHKLFRI
KINQIQMKETQEENVNTTERVFQDRQYQVDAAIVRIMKTRKSLSHNLLISELYNQLKFPV
KPSDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttcaaaagtacacaaagccccaatcttagattcgtcaacgcgagaagagaat
ccgttgagcagaaaacgcaaattcagtgaaaattatatcttcgcctccacgagcaaaagg
gctcgagaacatttggaaaacgagagccaaacaacaacaacaatgactgatgcgcctaaa
agggcgaacttttccgccctaaatcccagtaatggcattgccagacatgcctcgccactg
tctaacaacaagtctggggctatcaagaagctagttatcaaaaatttcaaagaaaagccc
aagttgcctgtgaacttccaacaggagaccctggagaagctgaaggaagctgtagaagct
atccacaccagccactccatcaaatccagcctagaagaattgtacaaggctgtggaaaac
atgtgttctcataagatgtcggctatgctctatgatgaattgaaaaaaatctgtgaaaac
tttgtgaagtcaaatcttgaacagttcttgggagataccactcattatgaacagtacctg
aagttgatggatagctgctggcaagctcactgtagacagatgataatgatcaggagtata
tttctttacttggaccggacatatgtactacagaacaactctgtattgtctatatgggag
atgggtctagacctgtttcgtcagcacattatcagtcacaacaccgtccagctgaggacc
gtggacggtctgctgctgctgatagagaaggagaggaacggggaggctgttgacaggcac
ctgctgaagagtttgctcaggatgctgtcagatctacagatatatcagtcggcgtttgag
aagaagttcctggaggcaacagacagattgtacgcggcagagggaaggaggctcatgcag
gagagagacgtgccggaatatctgactcatgtcgacaagaggctgaatgaagagacggag
aggctgttacactacctggatcaaagcacaagaaaacctttgattgctatagtagaaaag
caactgttggaacaacacctgtcttctatattaggcaaaggactggaccagctgttggat
gagaaccgggtcacagatatcagccttctctttcagttgtttgtcagggtcaaagatggc
atcaaagagctctgctctgccttcgctacttacatcaagctgactggccgcatggttgtg
gtgaacacagacagtgatccagagaaagacaaggatatggtacaaaaattattagatttt
aaggataagattgacaacattatatcagtgtgtttggggaggaatgagaagtttatcaac
tccatgaaggagagttttgagcacttcattaaccagagacagaacaaaccagctgagctg
atagctaagtatgtggattctaaattaagagcaggaaacaaggaagcaacagaagaggaa
ttagagcgcttgctggataagatcatggttctctttaggtttatacatggtaaagatgtg
tttgaagcattttataagaaagatcttgccaaacggttactggtgggcaaaagtgcctca
gtggatgccgaaaaatccatgttgtcgaagttaaaacaagaatgtggggcaggttttacc
agtaaactggaggggatgtttaaggacatggagctctccaaagacatcatgctcgccttc
aaacagcacatgatgaatctggatgcccctggtggtattgatctgacagtgaacatcctg
accatgggctactggccaacctaccctcccatggaagttcaccttccaacagagatggtc
cagtatcaggaaatcttcaagaagttttacctgagcaaacacagtgggagaaagttacag
tggcaacccactttaggacattgtgttttaaaggcagagtttcgggacgaggtgaagaaa
gagctacaggtgtctctgttccagactttggttttattattgttcaacgacgcagtggag
tttgtgtatgaagacatcaaacaagctacatccatagaggaaggggaactaaaaaggacg
ttgcagtcattggcttgtggaaaagcaagagttctcctgaaggttccaaagggtaaagac
atagaagatggtgacaagttcacgtttaatgaggatttcaagcacaaacttttccgcatc
aaaatcaaccagattcagatgaaggagacgcaagaggagaatgtcaacactacagaacga
gtattccaggatcgccagtatcaagtcgatgctgcgattgtgcgcatcatgaaaacaaga
aagagcttgtcccataacctgctgatatctgagctgtacaaccaactcaagttccctgtc
aagccctctgacctgaagaagaggattgagagccttattgacagggattacatggagaga
gacaaggacaatccaaaccagtatcactacgtggcctag
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