Liolophura japonica (common chiton): 135479129
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Entry
135479129 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ljp03000
]
135479129
Transcription factors [BR:
ljp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135479129
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
135479129
NCBI-ProteinID:
XP_064614949
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Position
12:10713232..10716189
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AA seq
331 aa
AA seq
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MVAGSHGSHGPHVPPGMQHHHPGQHPSQHSPHPSQQTSHTATRPARSPEWTESGQQGSPS
SKAAANDRVKRPMNAFMVWSRGTATKNGPGDPKMHNSEISKRLGAEWKLLSESEKRPFID
EAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYAIPGMSPAPVQQVGRDVYMNGYMPNGY
PMMAPDPHAAYSSQHMAAQMSGLTHGQYGNYLSAQSMSPQMTTGSYMPNGTSGYTMSMAS
MSPYASMPHAHSQMSQLSQIKREPGSGQGTPPVIRTPRAPGDIGEMISMYLPVDANDPNS
HARLQMQSAQYAHQVSSGESGVNNTVPLTHM
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggtagcgggcagccacggctcgcacgggcctcatgtaccgccggggatgcaacatcac
cacccgggccagcacccctcccagcactcaccgcacccctctcaacagacctcacacaca
gcaacccggccagcccgttccccagaatggacagagtccggccagcaaggttcgccgtcc
tcgaaagccgctgccaacgacagagtcaagcgtcccatgaacgccttcatggtgtggtct
agggggacagcgacgaaaaatggcccaggagaccccaagatgcacaactctgagatcagc
aaacgtctcggggcagagtggaagttactgtccgagtctgagaagaggcctttcatcgac
gaggcgaagcgattgagggctctacatatgaaggagcaccccgactacaagtaccgaccc
agacgcaagacgaaaactttgatgaaaaaggacaaatacgctataccaggtatgtcgcca
gccccagttcaacaggtggggagggacgtgtatatgaacggttacatgccgaacggctac
cctatgatggcaccagacccccacgccgcctactcctcacaacacatggccgctcagatg
tcgggtttgacccatggacagtacggtaactatctctcagctcaatccatgtccccgcaa
atgacgacgggctcgtacatgccgaatggcacgtcagggtacactatgtcgatggcctcc
atgtcgccttacgcctcaatgccgcatgcccattcccagatgtcgcagctttcacagatc
aagcgggagccaggcagtgggcaggggaccccaccggtgatccgcaccccccgggccccg
ggagatataggtgaaatgataagtatgtacttacctgtggatgctaatgatcctaactca
catgcaagactccaaatgcaaagtgctcaatacgctcatcaggtgtcgtcaggtgagagc
ggagtgaacaatacggtacccctaacgcacatgtag
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