Liolophura japonica (common chiton): 135480109
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Entry
135480109 CDS
T09976
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135480109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135480109
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135480109
Complex C
U4/U6.U5 tri-SnRNP related factors
135480109
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
135480109
NCBI-ProteinID:
XP_064615936
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Position
13:complement(12675558..12685047)
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AA seq
382 aa
AA seq
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MAPNNPLPTWGNEKTMNLNPLILTNIQSSPYFKVNLYELKTYHEVIDEIYYKVSHLEPWE
KGSRKTAGQTGMCGGVRGVGAGGIVSSAYCLLYKLFTLKLTRKQVNGLLTHCDSPYIRGL
GFMYIRYTQPPQDLWTWFEEYLFDDEEVDVKAGGGCVMTIGEMLRQWLMKLEWFSTLFPR
IPVPVQKSLDAKLRSLPVAQPEPEPAPEHIPDENVSFGEAERQASMRDGNRSPVDDSRKP
RPVHRSPPPSRSPHRRPSPHRRNSPHRRPSPHRHASPARRTGTSRHSSPPRHSSSRSSDF
SRELAREKERQRRERDGSRERRRSRSRERHPDRHHDRRSKDSEKRHKHRSRSRSRSRERR
KDREERRERHGHRSHKSRNGDF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcccctaacaaccccttacctacatggggtaatgaaaagacaatgaatttaaaccct
cttattctaacaaatattcagtcctccccttacttcaaagtcaatttgtatgagttgaag
acgtaccatgaggtcattgatgaaatctattacaaggtgagccatctagagccatgggag
aagggcagtcggaagacggcggggcagacaggcatgtgtggaggggtgcgaggtgtgggt
gcagggggcattgtctcaagtgcttactgtttactgtacaagctgttcacattgaagctg
acccgtaaacaagtgaatggtctcctcacacactgcgactccccctacatcaggggactc
gggtttatgtacattcggtacactcagcctccccaagacttatggacatggtttgaagaa
tatctttttgatgatgaggaggtagacgtaaaagcaggtgggggctgtgtgatgacgata
ggagaaatgctgcgccagtggttgatgaagcttgaatggttcagcactctcttcccaaga
attccagtccctgtacagaaaagtttagacgcaaagttacgatctctgccggttgcacag
cccgagcctgagccagcaccggagcacatccctgatgagaacgtgtcgtttggagaagcc
gagagacaagccagcatgagagacggaaacagaagtcctgtggatgacagtagaaagccg
cgccctgtgcatcgctcccctccgcccagcagatccccccatcgtcgcccctcccctcac
cgtcgcaactccccccatcgtcgcccttcccctcatcgtcacgcctctcctgcgcgacgc
acaggcacctcacggcactcttcacctcctcgacactcttcaagcaggtcaagtgatttc
tcccgtgaattggctcgcgaaaaagaacggcagagacgagagcgggacggctcgcgagaa
cggaggcgatctcgctccagagagcgccatcctgatcgtcaccacgatcgacgatcaaaa
gactctgaaaaacgccacaagcataggtccagatccaggtcaaggtcgcgggaacgacgg
aaagaccgagaggaacgacgtgagcgacacggtcaccgctcacataagtcacgcaatgga
gatttctaa
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