Liolophura japonica (common chiton): 135480263
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Entry
135480263 CDS
T09976
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135480263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ljp04121
]
135480263
Enzymes [BR:
ljp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135480263
Ubiquitin system [BR:
ljp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135480263
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
135480263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
zf-C3HC4
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
zf-RING_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
zf-RING_UBOX
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_DCAF4
zf-C3HC4_3
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR75_1st
zf-RING_5
WD40_RFWD3
Beta-prop_WDR35_TULP_N
zf-C3HC4_4
WD40_like
RING_XB3-XBAT31
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
zf-rbx1
zf-RING_10
Sina_RING
WDR54
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
135480263
NCBI-ProteinID:
XP_064616122
LinkDB
All DBs
Position
13:complement(2172945..2209254)
Genome browser
AA seq
623 aa
AA seq
DB search
MAGRSSNQPRRRKRTQPPVYCGVDGTYEDKDSDFVCPICFDTIEEAHMTRCGHTFCYKCI
KQSLEQANRCPKCNFVVESAEDIFPNFTLNELIMKSREKLNDKRIRVEQQNGPSHNSEMK
QLILEDNLDLSHVNQMLELLVAKKQQLEADSRAVQMQILKDFLQQVRVKKKEQLDRLKEE
VNQIEDDIDRVETVQREHCGKFPVCNNIQSPMVNGLDRTSPSTSDGSSQDGFNGSKSVST
QTGKPWLQTMAARRKKVSQHFEDLEQCYLTTRKEGPAEEGQPDGFERFTESLSKFTRFSN
FRPLATLSYASDIYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYDTVIKDAVDIHYPA
NEMVCNSKISCVTWSAYHKGLLASSDYEGTVTLWDAFTGTKSRLFQEHEKRCWSVDFNRM
DPKLLASGSDDAKVKLWSSNTEHSVACLEAKANVCCVKFNPESRYHLSFGSADHCVHYYD
LRNPKQPLMVFRGHRKAVSYVKFVNAEEMVSASTDSQLKLWHMSRPNCVRTFKGHANEKN
FVGLATDGDYIACGSENNSLYVFYKGLTKHLLAYKFDTVRSVLEKDKKEEDANEFVSAVA
WRPGSNVVVAANSQGTVKVLELV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcggtcttctaaccagccccggcggagaaagcgaacccagccgcccgtttac
tgtggggtcgacggtacctacgaggacaaagatagcgacttcgtctgccccatctgtttt
gacacgatagaagaagcccacatgacacgctgtggtcatactttctgttacaaatgtatc
aagcagagcttggagcaggcaaaccgctgtccaaagtgtaactttgtggtggagagtgca
gaagacatctttccaaactttacattaaatgaactcataatgaaatccagggaaaaacta
aacgacaaacgaatcagagttgagcaacagaatggcccgtcccataactctgaaatgaag
caattgatcttagaagacaacctggatctctctcatgtcaatcagatgttagagctcctg
gtggccaagaaacaacaactggaggctgactccagagctgtacagatgcagattttaaaa
gattttctccaacaggtccgagtgaaaaagaaagagcaattagacaggttaaaagaagaa
gttaatcagattgaagatgatatagacagggttgagactgttcaaagagagcattgtgga
aaattcccggtgtgtaataatatacaatcgcccatggtaaatggcttagacaggacgtct
ccctccaccagtgatggctccagtcaggacgggtttaacggcagtaagagtgtgagtact
cagactggtaagccctggctacagacaatggcagcacggaggaagaaagtcagccagcac
tttgaagacttagagcagtgttaccttacaacacgaaaagaggggccagcagaagagggc
cagcctgatgggtttgagaggtttacagaaagtctatccaagttcacccgctttagcaac
ttccgaccgttagcaactctcagttacgctagtgatatttataatggctctagtattgtt
tccagtattgagttcgacagagactgtgattattttgctatagcaggagttacgaaaaaa
ataaaggtatttgaatatgatacagtgataaaagacgctgtagacatccattatccagcc
aatgagatggtgtgtaactcgaaaataagctgtgtgacatggagcgcgtatcacaaaggt
ttactggccagttcagactacgagggaacggtcacactttgggatgctttcacaggcaca
aaatcaagattatttcaggaacacgaaaaacgatgttggagcgtcgacttcaacagaatg
gatcctaaattattagcctcaggttcagacgatgctaaggtcaaactgtggtcgtccaat
acagagcactctgtggcatgtctagaagccaaggctaatgtgtgctgtgtgaagtttaac
cctgaaagtcgttatcacctctcgtttggctcggcagatcactgtgtgcattattatgac
ctgcgcaaccccaaacagccgctgatggtgtttcggggacacaggaaggccgtgtcatac
gtcaagtttgttaatgctgaagagatggtgtctgcatctacagacagccagctgaaactg
tggcacatgagtcggcctaactgtgtgaggacattcaaggggcatgccaacgagaagaac
tttgtggggctggccacggatggggattacatagcctgtggcagtgaaaataattccctg
tacgtgttctataaaggcttaaccaagcacctgctggcctacaaatttgacactgtcagg
agtgtgctcgagaaagacaaaaaggaagaagatgccaatgaatttgttagtgctgttgcc
tggcgaccaggctctaatgttgttgtggctgccaacagtcagggcaccgtcaaggttctg
gagctcgtttga
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