Liolophura japonica (common chiton): 135480342
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Entry
135480342 CDS
T09976
Name
(RefSeq) protocadherin Fat 4-like
Organism
ljp
Liolophura japonica (common chiton)
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GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Ig_Cad99C_N
Motif
Other DBs
NCBI-GeneID:
135480342
NCBI-ProteinID:
XP_064616239
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Position
13:complement(15896475..15917325)
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AA seq
1990 aa
AA seq
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MQVVATDGGTPARSASTVVCVDVLNENDNSPVFSTDVFPASVSDGDAPGVFVTQIKATDL
DADSAIRYDFVTTNNYFQIDAISGNVTVSTTINRADILTANPNSQVDITVRASDGDKSTT
AFLRITIVATNRFPPKFTETVYTSDVNEGVSGVQVIQVSASDDDNPQEVITYSIHNSTLP
NIFTIDPSRGEVRLVQALDREALPAGFVEAVIVARDSGNPLPQRTATATLRLEVNDLNDN
VPQFDKDSHDLDIFQNFTSGQSFGLPKATDKDVSDTIVYELSDNAKQFFTLDPTSGVVTT
RTDCDASCRKLEDCHEMTFTLSAYNPGTPLQKDTLTVRLTLLSLGTTRTPAAGMKSCSDA
NSPNDHDPKFTEDNYDGTVNEGVPPNTVVLIVNTTDEDWGNSGKVTYTITNSTRFGIDDD
GQIYTTGDLDYEKPEDRRTCMQVVATDGGTPARSASTVVCVDLINSNDHRPKFVRPLFTA
VINDGALPGTFVTTISATDKDADSQITYDFALPNDYFQIDPASGNVTVSKTIVRSEILLT
DPKALITVQVRANDGKFLEITQLMVTVLEVNRFAPEFNQTIYNAAVDEGISNVVVGQVTA
NDRDVPKQQITYSIYNSTIPNIFTIDPSSGEVRLVQALDREALPVGFVEVVIMARDSGNP
PPQRTATATLRLQVNDVNDNVPQFDEDSHDLDIFQNFTSGQSFVLPKATDKDVSDTIVYE
LSDNAKQFFTLDPTSGVVTTRTDCDASCKKLADCNYMTFTLWAYNPDAQDRRDSLTVRLT
LLALTNTRTPATDIKSCSDTNSPNNHDPKFTKDNYEGTVDEGVPPNTVVITVNTTDEDWG
DSGKVTYTITNSTRFGIDDDGQIYTTGDLDYEKPEDRRTCMQVVATDGGTPARSASTVVC
VDLINSNDHRPKFVRPLFTAVINDGALPGTFVTTISATDKDADSQITYDFVLPNDYFQID
PASGNVTVSKTIVRSEILLTDPKALITVQVRANDGKFLEITQLMVTVLEVNRFAPEFNQT
IYNAAVDEGISNVVVGQVTANDRDVPKQQITYSIYNSTIPNIFTIDPSSGEVRLVQALDR
EALPVGFVEVVIMARDSGNPPPQRTATATLRLQVNDVNDNVPQFDKDSHDLDIFQNFTSG
QSFVLPKATDKDVSDTIVYELSDNAKQFFTLDPTSGVVTTRTDCDASCKKLADCNYMTFT
LWAYNPDAQDRRDSLTVRLTLLALTNTRTPATDIKSCSDTNSPNNHDPKFTEDNYDGTVN
EGVPPNTVVITVNTTDEDWGDSGKVTYTITNSTRFGIDDDGQIYTTGDLDYEKPEDRRTC
MQVVATDGGTPARSASTVVCVDLINSNDHRPKFVRPLFTAVINDGALPGTFVTTISATDK
DADSQITYDFVLPNDYFQIDPASGNVTVSKTIVRSEILLTYPKALITVQVRANDGKFLEI
TQLMVTVLEVNRFAPEFNQTIYNAAVDEGISNVVVGQVTANDRDVPKQQITYSIYNSTIP
NIFTVDPSSGEVRLVQALDREALPVGFVEVVIMARDSGNPPPQRTATATLRLQVNDVNDN
VPQFDKDSHDLDIFQNFTSGQSFVLPKATDKDVSDTIVYELSDNAKQFFTLDPTSGVVTT
RTDCDASCKKLADCNYMTFTVWAYNPDAQDRRDSLTVRLTLLALTNTRTPATDIKSCSDT
NSPNNHDPKFTKDNYEGTVDEGVPPNTVVITVNTTDEDWGNSGKVTYTITNSTRFGIDDD
GQIYTTGDLDYEKPEDRRTCMQVVATDGGTPARSASTVVCVDVRNKNEHTPTFTRPTFST
FVYDRDAPGTFVIQILATDRDSGATVRHTLVPGTSEYFQIDAISGNITVKKTINRDAMLQ
NTGADFVTLTVRATDGVLDSTAQLRVTVVKKNDFAPEFGQEVFPVTVIEETVVDPLITVT
ATDRDSINEIVTYRIVNVTSLVSIDSSTGVIRLHRAIDRESLGGDGIVDIVVEAKDSGRP
PSLPLSNRHC
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggtggccacagatggaggaacgccggcccgatccgcctccaccgtcgtctgt
gtggacgtgctgaatgagaacgataactcgccggtgttttccactgatgttttcccggcc
tctgtgtccgatggagatgccccgggagtgtttgtcacccagattaaggccacagatctg
gatgccgattctgccatccgctacgactttgtgacaacaaacaactatttccagatcgat
gccatcagtggaaatgtgacggtgtcgacgacgataaacagggctgatattctgacagca
aatcccaattctcaagttgacatcactgttagggcaagcgatggtgacaaaagtacaaca
gcttttcttcgtattactatagtggccacgaacaggtttcctccgaagtttaccgagacc
gtgtacacctctgacgtgaacgaaggggtatccggggtacaagtgatccaagtatccgcc
agtgatgatgacaacccacaagaggtcatcacctacagtatccacaactccacattacca
aacatcttcacgatcgacccatccagaggggaagtccgcttagttcaggctctggatcgg
gaggcgctccctgcggggtttgtggaggctgtgatcgtggcccgggacagcggcaatcct
ctcccacagaggacagccacagccacactccgtctcgaggtgaacgatctcaacgacaac
gtgccccagtttgacaaggattcacatgacctcgacattttccaaaattttacatcaggg
caaagtttcggtctgcccaaagccacggacaaagacgtatccgacacgatcgtgtacgag
ttgtctgacaacgccaagcagttctttactctggatcctacttccggcgtggtcaccacc
cggactgattgtgacgcaagctgtagaaaacttgaagactgtcatgaaatgacgttcaca
ctgtcagcatataaccctgggaccccactacagaaggacacacttactgtcagactcaca
ctactctcactgggcaccacacggaccccagcagcgggtatgaagtcatgttcggacgca
aattccccgaatgatcacgatccaaagtttacagaagacaactacgacggcacagtgaat
gaaggagttcccccgaacactgtcgttctcattgtcaacacaacggacgaggactgggga
aacagtggtaaggtgacctacactatcaccaactctacccgattcggcatcgatgacgac
ggccaaatctacacgacaggagacctggattacgagaagcctgaggatcggcgcacctgt
atgcaagtggtggccacagatggaggaacgccggcccgatccgcctccaccgtcgtctgt
gttgatctgataaattccaatgaccaccggccaaagtttgttagacctttattcacagct
gtcataaacgatggtgctctcccgggtacattcgtgaccacaatttcggctacagacaag
gacgcggattcacaaataacctatgattttgccctgcccaacgactatttccagattgac
ccagccagtggtaacgtcactgtctccaaaaccatcgttagatcggagattctccttacc
gacccaaaagccctgatcactgtccaagtgagggcgaacgatggcaagttcctggaaatc
acacaactgatggtcacagttctggaagtaaaccgtttcgctccggagttcaaccagaca
atctataacgcagctgtcgatgagggcatatccaatgttgttgttggtcaagtaacagcc
aatgatagagatgttcccaagcaacaaataacctattccatctacaactcaaccattccc
aacatcttcacgatcgacccgtccagcggcgaggtccgcctagtccaggctctggatcgg
gaggcgcttcctgtggggtttgtggaggttgtgatcatggcccgggacagcggcaaccct
cccccacagagaacggccacagccacactccgtcttcaggtgaacgatgtcaacgacaac
gtgccccagtttgacgaggactctcatgaccttgacatttttcagaattttacatcaggg
caaagtttcgttctgcccaaagccacggacaaagacgtatctgacacgatcgtgtacgag
ttgtctgacaacgccaagcagttctttactctggatcctacttctggcgtggtcaccacc
cggactgattgtgacgcaagctgtaagaagttagccgactgtaactacatgacgtttacg
ttatgggcttacaatcctgacgctcaggataggagggactctcttaccgtccgactcacg
ctgctggccctgacaaacacccgtacccctgccacagatattaaatcttgttctgacacg
aattcgccgaacaaccacgatccaaagtttacaaaagacaactacgagggcaccgtggat
gaaggagttcccccgaacactgtcgtcattaccgtaaacacaacggacgaggattgggga
gacagtggtaaggtgacctacactatcaccaactctacccgattcggcatcgatgacgac
ggccaaatctacacgacaggagatctggattacgagaagcctgaggatcggcgcacctgt
atgcaagtggtggccacagatggaggaacgccggcccgatccgcctccaccgtcgtctgt
gttgatctgataaattccaatgaccaccggccaaagtttgttagacctttattcacagct
gtcataaacgatggtgctctcccgggtacatttgtgaccacaatttcggctacagacaag
gacgcggattcacaaatcacctatgattttgtcctgcccaacgactatttccagattgac
ccagccagtggtaacgtcactgtctccaaaaccatcgttagatcggagattctccttacc
gacccaaaagccctgatcactgtccaagtgagggcgaacgatggcaagttcctggaaatc
acacaactgatggtcacagttctggaagtaaaccgtttcgctccggagttcaaccagaca
atctataacgcagctgtcgatgagggcatatccaatgttgttgttggtcaagtaacagcc
aatgatagagatgttcccaagcaacaaataacctattccatctacaactcaaccattccc
aacatcttcacgatcgacccgtccagcggcgaggtccgcctagtccaggctctggatcgg
gaggcgcttcctgtggggtttgtggaggttgtgatcatggcccgggacagcggcaaccct
cccccacagagaacggccacagccacactccgtcttcaggtgaacgatgtcaacgacaac
gtgccccagtttgacaaggactctcatgaccttgacatttttcagaattttacatcaggg
caaagtttcgttctgcccaaagctacggacaaagacgtatccgacacgatcgtgtacgag
ttgtctgacaacgccaagcagttcttcaccctggatcctacttctggcgtggtcacaaca
aggacggattgtgacgccagctgtaagaagttagccgactgtaactacatgacgtttacg
ctatgggcttacaaccctgacgctcaggataggagggactctcttaccgtccggctcacg
ctgctggccctgacaaacacccgtacccctgccacagatattaaatcttgttctgacacg
aattcgccgaacaaccacgatccaaagtttacagaagacaactacgacggcacagtgaat
gaaggggttcccccaaacactgtcgtcattaccgtaaacacaacagacgaggattgggga
gacagtggtaaggtgacctacactatcaccaactctacccgattcggcatcgatgacgac
ggccaaatctacacgacaggagacctggattacgagaagcctgaggatcggcgcacctgt
atgcaagtggtggccacagatggaggaacgccggcccgatccgcctccaccgtcgtctgt
gttgatctgataaattccaatgaccaccggccaaagtttgttagacctttattcacagct
gtcataaacgatggtgctctcccgggtacattcgtgaccacaatttcggctacagacaag
gacgcggattcacaaataacctatgattttgtcctgcccaacgactatttccagattgac
ccagccagtggtaacgtcactgtctccaaaaccatcgttagatcggagattctccttacc
tacccaaaagccctgatcactgtccaagtgagggcgaacgatggcaagttcctggaaatc
acacaactgatggtcacagttctggaagtaaaccgtttcgctccggagttcaaccagaca
atctataacgcagctgtcgatgagggcatatccaatgttgttgttggtcaagtaacagcc
aatgatagagatgttcccaagcaacaaataacctattccatctacaactcaaccattccc
aacatcttcacggtcgacccatccagcggcgaggtccgcctagtccaggctctggatcgg
gaggcgctccctgtggggtttgtggaggttgtgatcatggcccgggacagcggcaaccct
cccccacagagaacggccacagccacactccgtctccaggtgaacgatgtcaacgacaac
gtgccccagtttgacaaggactctcatgaccttgacatttttcagaattttacatcaggg
caaagtttcgttttgcccaaagccacggacaaagacgtatccgacacgatcgtgtatgag
ttgtctgacaacgccaagcagttcttcaccctggatcctacttctggcgtggtcacaaca
aggacggattgtgacgccagctgtaagaagttagccgactgtaactacatgacgtttaca
gtatgggcttacaatcctgacgctcaagataggagggactctcttaccgtccggctcacg
ctgctggccctgacaaacacccgtacccctgccacagatattaaatcttgttctgacacg
aattcgccgaacaaccacgatccaaagtttacaaaagacaactacgagggcaccgtggat
gaaggagttcccccgaacactgtcgtcattaccgtcaacacaacggacgaggactgggga
aacagtggtaaggtgacctacactatcaccaactctacccgattcggcatcgatgacgac
ggccaaatctacacgacaggagacctggattacgagaagcctgaggatcggcgcacctgt
atgcaagtggtggccacagatggaggaacgccggcccgatccgcctccaccgtcgtctgt
gtcgacgtgcggaataagaacgagcatacgccaactttcactcgtcccacgttcagcact
ttcgtgtatgatcgtgatgctcccggaacttttgtgatacaaattttggcaacagatagg
gattctggggcgacagtaaggcatactctggtcccaggtaccagtgagtattttcagatc
gacgctatcagcgggaatataactgttaagaaaacaatcaatagggatgccatgttacaa
aacactggagcagactttgtaaccttgactgtacgagctactgatggagtgctggactct
acggcccaacttcgggtgacagttgtgaagaaaaatgattttgctccagagtttggccag
gaagtgttcccagtgactgtgatagaggaaactgtggtggatccgctgataaccgtgacg
gccactgacagggacagcataaatgagatcgtaacctaccgtattgtgaacgttacaagt
cttgtctctattgattcctcaactggagttattcgtctgcaccgcgcgatagatcgggag
agtttgggcggtgacggaatagtggacattgtggtcgaggctaaggacagtggccgtccc
ccctccctaccgctcagcaaccgccactgttag
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